RNA–Protein interactions for RNA: ENST00000556333.1

RCCD1-205, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-205ENST00000556333 PRR25Q96S07 402 aa15.33■□□□□ 0.04
RCCD1-205ENST00000556333 DAZ1Q9NQZ3 744 aaKnown RBP15.33■□□□□ 0.04
RCCD1-205ENST00000556333 PUS1Q9Y606 427 aaKnown RBP eCLIP15.33■□□□□ 0.04
RCCD1-205ENST00000556333 ALG5Q9Y673 324 aa15.33■□□□□ 0.04
RCCD1-205ENST00000556333 SELENOKQ9Y6D0 94 aa15.33■□□□□ 0.04
RCCD1-205ENST00000556333 PVALBP20472 110 aaPredicted RBP15.32■□□□□ 0.04
RCCD1-205ENST00000556333 BCAP31P51572 246 aa15.32■□□□□ 0.04
RCCD1-205ENST00000556333 PAX9P55771 341 aa15.32■□□□□ 0.04
RCCD1-205ENST00000556333 RAB32Q13637 225 aa15.32■□□□□ 0.04
RCCD1-205ENST00000556333 OR8G2PQ6IF36 304 aa15.32■□□□□ 0.04
RCCD1-205ENST00000556333 ADAMTSL5Q6ZMM2 481 aa15.32■□□□□ 0.04
RCCD1-205ENST00000556333 OR1S2Q8NGQ3 325 aa15.32■□□□□ 0.04
RCCD1-205ENST00000556333 MRPL27Q9P0M9 148 aaKnown RBP15.32■□□□□ 0.04
RCCD1-205ENST00000556333 MGAT4CQ9UBM8 478 aa15.32■□□□□ 0.04
RCCD1-205ENST00000556333 C7orf66A4D0T2 115 aa15.31■□□□□ 0.04
RCCD1-205ENST00000556333 TSC22D2O75157 780 aa15.31■□□□□ 0.04
RCCD1-205ENST00000556333 TAS2R30P59541 319 aa15.31■□□□□ 0.04
RCCD1-205ENST00000556333 GAMTQ14353 236 aa15.31■□□□□ 0.04
RCCD1-205ENST00000556333 LCN12Q6JVE5 192 aa15.31■□□□□ 0.04
RCCD1-205ENST00000556333 MRAPQ8TCY5 172 aa15.31■□□□□ 0.04
RCCD1-205ENST00000556333 MARC2Q969Z3 335 aa15.31■□□□□ 0.04
RCCD1-205ENST00000556333 GINS3Q9BRX5 216 aa15.31■□□□□ 0.04
RCCD1-205ENST00000556333 WI2-2373I1.2A0A1W2PRP0 233 aa15.3■□□□□ 0.04
RCCD1-205ENST00000556333 ZFP92A6NM28 416 aa15.3■□□□□ 0.04
RCCD1-205ENST00000556333 METTL15P1P0C7V9 234 aa15.3■□□□□ 0.04
RCCD1-205ENST00000556333 IGLC1P0CG04 106 aa15.3■□□□□ 0.04
RCCD1-205ENST00000556333 GP9P14770 177 aa15.3■□□□□ 0.04
RCCD1-205ENST00000556333 BTNL8Q6UX41 500 aa15.3■□□□□ 0.04
RCCD1-205ENST00000556333 TOMM20LQ6UXN7 152 aa15.3■□□□□ 0.04
RCCD1-205ENST00000556333 NMES1Q9C002 83 aa15.3■□□□□ 0.04
RCCD1-205ENST00000556333 TECRQ9NZ01 308 aaKnown RBP15.3■□□□□ 0.04
RCCD1-205ENST00000556333 PRKDCP78527 4128 aaKnown RBP15.29■□□□□ 0.04
RCCD1-205ENST00000556333 SMCO3A2RU48 225 aa15.29■□□□□ 0.04
RCCD1-205ENST00000556333 K7EMT4 169 aa15.29■□□□□ 0.04
RCCD1-205ENST00000556333 CCNKO75909 580 aa15.29■□□□□ 0.04
RCCD1-205ENST00000556333 IGKV1-17P01599 117 aa15.29■□□□□ 0.04
RCCD1-205ENST00000556333 CAV2P51636 162 aa15.29■□□□□ 0.04
RCCD1-205ENST00000556333 CYCSP99999 105 aaKnown RBP15.29■□□□□ 0.04
RCCD1-205ENST00000556333 AKR1C1Q04828 323 aa15.29■□□□□ 0.04
RCCD1-205ENST00000556333 DEFB114Q30KQ6 69 aa15.29■□□□□ 0.04
RCCD1-205ENST00000556333 CD300EQ496F6 205 aaPredicted RBP15.29■□□□□ 0.04
RCCD1-205ENST00000556333 LRRC37A5PQ49AS3 106 aa15.29■□□□□ 0.04
RCCD1-205ENST00000556333 OR10P1Q8NGE3 313 aa15.29■□□□□ 0.04
RCCD1-205ENST00000556333 OR2K2Q8NGT1 345 aa15.29■□□□□ 0.04
RCCD1-205ENST00000556333 Q8WTZ3 238 aa15.29■□□□□ 0.04
RCCD1-205ENST00000556333 ZNF414Q96IQ9 312 aa15.29■□□□□ 0.04
RCCD1-205ENST00000556333 MLXQ9UH92 298 aa15.29■□□□□ 0.04
RCCD1-205ENST00000556333 IGHV3-49A0A0A0MS15 119 aa15.28■□□□□ 0.04
RCCD1-205ENST00000556333 TRAV14DV4A0A0A6YYC5 116 aa15.28■□□□□ 0.04
RCCD1-205ENST00000556333 PRSS46E5RG02 174 aa15.28■□□□□ 0.04
RCCD1-205ENST00000556333 RLN2P04090 185 aa15.28■□□□□ 0.04
RCCD1-205ENST00000556333 YPEL3P61236 119 aaPredicted RBP15.28■□□□□ 0.04
RCCD1-205ENST00000556333 RRAS2P62070 204 aaPredicted RBP15.28■□□□□ 0.04
RCCD1-205ENST00000556333 IL15RAQ13261 267 aa15.28■□□□□ 0.04
RCCD1-205ENST00000556333 DEFB121Q5J5C9 76 aa15.28■□□□□ 0.04
RCCD1-205ENST00000556333 TMEM14EPQ6UXP3 125 aa15.28■□□□□ 0.04
RCCD1-205ENST00000556333 ACOT7LQ6ZUV0 252 aa15.28■□□□□ 0.04
RCCD1-205ENST00000556333 ZFAND3Q9H8U3 227 aa15.28■□□□□ 0.04
RCCD1-205ENST00000556333 SORL1Q92673 2214 aa15.27■□□□□ 0.04
RCCD1-205ENST00000556333 IZUMO1RA6ND01 250 aa15.27■□□□□ 0.04
RCCD1-205ENST00000556333 C8orf88P0DMB2 117 aa15.27■□□□□ 0.04
RCCD1-205ENST00000556333 H2BFSP57053 126 aa15.27■□□□□ 0.04
RCCD1-205ENST00000556333 GUCA2BQ16661 112 aa15.27■□□□□ 0.04
RCCD1-205ENST00000556333 MED28Q9H204 178 aa15.27■□□□□ 0.04
RCCD1-205ENST00000556333 NBEAL2Q6ZNJ1 2754 aa15.26■□□□□ 0.03
RCCD1-205ENST00000556333 IGHV3OR16-13A0A075B7E8 117 aa15.26■□□□□ 0.03
RCCD1-205ENST00000556333 IGHV3-74A0A0B4J1X5 117 aa15.26■□□□□ 0.03
RCCD1-205ENST00000556333 IGHV7-4-1A0A0J9YVY3 117 aa15.26■□□□□ 0.03
RCCD1-205ENST00000556333 FAM24AA6NFZ4 105 aa15.26■□□□□ 0.03
RCCD1-205ENST00000556333 PMS2P5A8MQ11 134 aa15.26■□□□□ 0.03
RCCD1-205ENST00000556333 K7EIL1 84 aa15.26■□□□□ 0.03
RCCD1-205ENST00000556333 RD3LP0DJH9 198 aa15.26■□□□□ 0.03
RCCD1-205ENST00000556333 RBPMS2Q6ZRY4 209 aaKnown RBP15.26■□□□□ 0.03
RCCD1-205ENST00000556333 SMPXQ9UHP9 88 aa15.26■□□□□ 0.03
RCCD1-205ENST00000556333 TOMM40O96008 361 aa15.25■□□□□ 0.03
RCCD1-205ENST00000556333 IL4P05112 153 aa15.25■□□□□ 0.03
RCCD1-205ENST00000556333 FABP1P07148 127 aa15.25■□□□□ 0.03
RCCD1-205ENST00000556333 NPPCP23582 126 aa15.25■□□□□ 0.03
RCCD1-205ENST00000556333 WDR89Q96FK6 387 aaPredicted RBP15.25■□□□□ 0.03
RCCD1-205ENST00000556333 METTL26Q96S19 204 aa15.25■□□□□ 0.03
RCCD1-205ENST00000556333 DEDDO75618 318 aa15.24■□□□□ 0.03
RCCD1-205ENST00000556333 SCAF4O95104 1147 aaKnown RBP15.24■□□□□ 0.03
RCCD1-205ENST00000556333 PSG1P11464 419 aa15.24■□□□□ 0.03
RCCD1-205ENST00000556333 BMI1P35226 326 aa15.24■□□□□ 0.03
RCCD1-205ENST00000556333 DLK1P80370 383 aa15.24■□□□□ 0.03
RCCD1-205ENST00000556333 ZNF90Q03938 601 aa15.24■□□□□ 0.03
RCCD1-205ENST00000556333 OXA1LQ15070 435 aa15.24■□□□□ 0.03
RCCD1-205ENST00000556333 TMEM61Q8N0U2 210 aa15.24■□□□□ 0.03
RCCD1-205ENST00000556333 NARS2Q96I59 477 aaKnown RBP15.24■□□□□ 0.03
RCCD1-205ENST00000556333 RHPN1-AS1Q9BWJ2 59 aa15.24■□□□□ 0.03
RCCD1-205ENST00000556333 C11orf1Q9H5F2 150 aa15.24■□□□□ 0.03
RCCD1-205ENST00000556333 LYRM2Q9NU23 88 aaPredicted RBP15.24■□□□□ 0.03
RCCD1-205ENST00000556333 IGKV1D-37A0A075B6S9 117 aa15.23■□□□□ 0.03
RCCD1-205ENST00000556333 CHEK1O14757 476 aa15.23■□□□□ 0.03
RCCD1-205ENST00000556333 CST7O76096 145 aa15.23■□□□□ 0.03
RCCD1-205ENST00000556333 OR2F1Q13607 317 aa15.23■□□□□ 0.03
RCCD1-205ENST00000556333 LAMTOR1Q6IAA8 161 aa15.23■□□□□ 0.03
RCCD1-205ENST00000556333 GTSCR1Q86UQ5 136 aa15.23■□□□□ 0.03
RCCD1-205ENST00000556333 THAP8Q8NA92 274 aa15.23■□□□□ 0.03
RCCD1-205ENST00000556333 OR51G1Q8NGK1 321 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms