RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 IFNA10P01566 189 aa8.64□□□□□ -1.03
SLIRP-205ENST00000556310 ATP5IP56385 69 aaPredicted RBP8.64□□□□□ -1.03
SLIRP-205ENST00000556310 DHRS2Q13268 280 aa8.64□□□□□ -1.03
SLIRP-205ENST00000556310 CNPY1Q3B7I2 92 aa8.64□□□□□ -1.03
SLIRP-205ENST00000556310 ETFRF1Q6IPR1 90 aa8.64□□□□□ -1.03
SLIRP-205ENST00000556310 PRSS54Q6PEW0 395 aa8.64□□□□□ -1.03
SLIRP-205ENST00000556310 TOMM20LQ6UXN7 152 aa8.64□□□□□ -1.03
SLIRP-205ENST00000556310 TMEM116Q8NCL8 245 aa8.64□□□□□ -1.03
SLIRP-205ENST00000556310 WWC2-AS2Q96NR7 200 aa8.64□□□□□ -1.03
SLIRP-205ENST00000556310 TM2D3Q9BRN9 247 aa8.64□□□□□ -1.03
SLIRP-205ENST00000556310 WFDC10AQ9H1F0 79 aa8.64□□□□□ -1.03
SLIRP-205ENST00000556310 ZMAT4Q9H898 229 aa8.64□□□□□ -1.03
SLIRP-205ENST00000556310 FLVCR2Q9UPI3 526 aa8.64□□□□□ -1.03
SLIRP-205ENST00000556310 PUS1Q9Y606 427 aaKnown RBP eCLIP8.64□□□□□ -1.03
SLIRP-205ENST00000556310 DNAH7Q8WXX0 4024 aa8.64□□□□□ -1.03
SLIRP-205ENST00000556310 TRAV30A0A087WSZ9 112 aa8.63□□□□□ -1.03
SLIRP-205ENST00000556310 TRAV14DV4A0A0A6YYC5 116 aa8.63□□□□□ -1.03
SLIRP-205ENST00000556310 CHEK1O14757 476 aa8.63□□□□□ -1.03
SLIRP-205ENST00000556310 PLA2G10O15496 165 aa8.63□□□□□ -1.03
SLIRP-205ENST00000556310 LYRM1O43325 122 aa8.63□□□□□ -1.03
SLIRP-205ENST00000556310 IGKV1-17P01599 117 aa8.63□□□□□ -1.03
SLIRP-205ENST00000556310 HOXB5P09067 269 aa8.63□□□□□ -1.03
SLIRP-205ENST00000556310 OR4E1P0C645 316 aa8.63□□□□□ -1.03
SLIRP-205ENST00000556310 BMI1P35226 326 aa8.63□□□□□ -1.03
SLIRP-205ENST00000556310 RND2P52198 227 aa8.63□□□□□ -1.03
SLIRP-205ENST00000556310 MLANAQ16655 118 aa8.63□□□□□ -1.03
SLIRP-205ENST00000556310 GGNBP1Q5YKI7 109 aa8.63□□□□□ -1.03
SLIRP-205ENST00000556310 LYG2Q86SG7 212 aa8.63□□□□□ -1.03
SLIRP-205ENST00000556310 DEFB125Q8N687 156 aa8.63□□□□□ -1.03
SLIRP-205ENST00000556310 OR1S2Q8NGQ3 325 aa8.63□□□□□ -1.03
SLIRP-205ENST00000556310 COQ8AQ8NI60 647 aa8.63□□□□□ -1.03
SLIRP-205ENST00000556310 S100ZQ8WXG8 99 aa8.63□□□□□ -1.03
SLIRP-205ENST00000556310 RCHY1Q96PM5 261 aa8.63□□□□□ -1.03
SLIRP-205ENST00000556310 RHPN1-AS1Q9BWJ2 59 aa8.63□□□□□ -1.03
SLIRP-205ENST00000556310 C20orf85Q9H1P6 137 aa8.63□□□□□ -1.03
SLIRP-205ENST00000556310 SRD5A3Q9H8P0 318 aa8.63□□□□□ -1.03
SLIRP-205ENST00000556310 NBEAL2Q6ZNJ1 2754 aa8.62□□□□□ -1.03
SLIRP-205ENST00000556310 IGHV3-49A0A0A0MS15 119 aa8.62□□□□□ -1.03
SLIRP-205ENST00000556310 OR4C46A6NHA9 309 aa8.62□□□□□ -1.03
SLIRP-205ENST00000556310 MED6O75586 246 aa8.62□□□□□ -1.03
SLIRP-205ENST00000556310 IGLC1P0CG04 106 aa8.62□□□□□ -1.03
SLIRP-205ENST00000556310 ANXA7P20073 488 aaKnown RBP8.62□□□□□ -1.03
SLIRP-205ENST00000556310 HAGHQ16775 308 aa8.62□□□□□ -1.03
SLIRP-205ENST00000556310 C4orf46Q504U0 113 aa8.62□□□□□ -1.03
SLIRP-205ENST00000556310 LINC00322Q6ZN03 302 aaPredicted RBP8.62□□□□□ -1.03
SLIRP-205ENST00000556310 RNF2Q99496 336 aa8.62□□□□□ -1.03
SLIRP-205ENST00000556310 SPATA25Q9BR10 227 aa8.62□□□□□ -1.03
SLIRP-205ENST00000556310 PTTG2Q9NZH5 202 aa8.62□□□□□ -1.03
SLIRP-205ENST00000556310 ADAP1O75689 374 aa8.61□□□□□ -1.03
SLIRP-205ENST00000556310 IFNA4P05014 189 aa8.61□□□□□ -1.03
SLIRP-205ENST00000556310 CD5P06127 495 aa8.61□□□□□ -1.03
SLIRP-205ENST00000556310 IAPPP10997 89 aa8.61□□□□□ -1.03
SLIRP-205ENST00000556310 OR10J1P30954 320 aa8.61□□□□□ -1.03
SLIRP-205ENST00000556310 YPEL3P61236 119 aaPredicted RBP8.61□□□□□ -1.03
SLIRP-205ENST00000556310 TIGITQ495A1 244 aa8.61□□□□□ -1.03
SLIRP-205ENST00000556310 ST8SIA2Q92186 375 aa8.61□□□□□ -1.03
SLIRP-205ENST00000556310 ACY3Q96HD9 319 aa8.61□□□□□ -1.03
SLIRP-205ENST00000556310 CIB3Q96Q77 187 aaPredicted RBP8.61□□□□□ -1.03
SLIRP-205ENST00000556310 TMEM231Q9H6L2 316 aa8.61□□□□□ -1.03
SLIRP-205ENST00000556310 VSIRQ9H7M9 311 aa8.61□□□□□ -1.03
SLIRP-205ENST00000556310 IGHV3OR16-13A0A075B7E8 117 aa8.6□□□□□ -1.03
SLIRP-205ENST00000556310 IGHV3-74A0A0B4J1X5 117 aa8.6□□□□□ -1.03
SLIRP-205ENST00000556310 RBMY1BA6NDE4 496 aaKnown RBP8.6□□□□□ -1.03
SLIRP-205ENST00000556310 RBMY1EA6NEQ0 496 aaKnown RBP8.6□□□□□ -1.03
SLIRP-205ENST00000556310 SYNGR2O43760 224 aa8.6□□□□□ -1.03
SLIRP-205ENST00000556310 IFNA21P01568 189 aa8.6□□□□□ -1.03
SLIRP-205ENST00000556310 RBMY1DP0C7P1 496 aaKnown RBP8.6□□□□□ -1.03
SLIRP-205ENST00000556310 GPX4P36969 197 aaPredicted RBP8.6□□□□□ -1.03
SLIRP-205ENST00000556310 RAB11AP62491 216 aa8.6□□□□□ -1.03
SLIRP-205ENST00000556310 ODF3L2Q3SX64 289 aa8.6□□□□□ -1.03
SLIRP-205ENST00000556310 FAM90A2PQ658T7 463 aa8.6□□□□□ -1.03
SLIRP-205ENST00000556310 MITD1Q8WV92 249 aa8.6□□□□□ -1.03
SLIRP-205ENST00000556310 NPIPB3Q92617 1050 aa8.6□□□□□ -1.03
SLIRP-205ENST00000556310 METTL26Q96S19 204 aa8.6□□□□□ -1.03
SLIRP-205ENST00000556310 FAM110AQ9BQ89 295 aa8.6□□□□□ -1.03
SLIRP-205ENST00000556310 WDR12Q9GZL7 423 aaKnown RBP8.6□□□□□ -1.03
SLIRP-205ENST00000556310 A0A1W2PS18 150 aa8.59□□□□□ -1.03
SLIRP-205ENST00000556310 MPTX1A8MV57 137 aa8.59□□□□□ -1.03
SLIRP-205ENST00000556310 TOMM40O96008 361 aa8.59□□□□□ -1.03
SLIRP-205ENST00000556310 APOHP02749 345 aaPredicted RBP8.59□□□□□ -1.03
SLIRP-205ENST00000556310 TCRBP04435 133 aa8.59□□□□□ -1.03
SLIRP-205ENST00000556310 NPPCP23582 126 aa8.59□□□□□ -1.03
SLIRP-205ENST00000556310 CRYBB3P26998 211 aa8.59□□□□□ -1.03
SLIRP-205ENST00000556310 RPP30P78346 268 aaKnown RBP8.59□□□□□ -1.03
SLIRP-205ENST00000556310 TCF24Q7RTU0 167 aa8.59□□□□□ -1.03
SLIRP-205ENST00000556310 OR4D5Q8NGN0 318 aa8.59□□□□□ -1.03
SLIRP-205ENST00000556310 Q8WTZ3 238 aa8.59□□□□□ -1.03
SLIRP-205ENST00000556310 NARS2Q96I59 477 aaKnown RBP8.59□□□□□ -1.03
SLIRP-205ENST00000556310 SLC35E1Q96K37 410 aa8.59□□□□□ -1.03
SLIRP-205ENST00000556310 GGTLC1Q9BX51 225 aa8.59□□□□□ -1.03
SLIRP-205ENST00000556310 MAGT1Q9H0U3 335 aa8.59□□□□□ -1.03
SLIRP-205ENST00000556310 NUDT15Q9NV35 164 aa8.59□□□□□ -1.03
SLIRP-205ENST00000556310 WRBO00258 174 aa8.58□□□□□ -1.04
SLIRP-205ENST00000556310 NKX2-1P43699 371 aaPredicted RBP8.58□□□□□ -1.04
SLIRP-205ENST00000556310 ASAH1Q13510 395 aa8.58□□□□□ -1.04
SLIRP-205ENST00000556310 ZNF846Q147U1 533 aa8.58□□□□□ -1.04
SLIRP-205ENST00000556310 RNF141Q8WVD5 230 aa8.58□□□□□ -1.04
SLIRP-205ENST00000556310 BATF3Q9NR55 127 aa8.58□□□□□ -1.04
SLIRP-205ENST00000556310 UBQLN2Q9UHD9 624 aa8.58□□□□□ -1.04
SLIRP-205ENST00000556310 TBC1D24Q9ULP9 559 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms