RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 IGLV2-8P01709 118 aa5.65□□□□□ -1.5
TDP1-213ENST00000555880 COL8A2P25067 703 aa5.65□□□□□ -1.5
TDP1-213ENST00000555880 AMTP48728 403 aa5.65□□□□□ -1.5
TDP1-213ENST00000555880 LINC00310P59036 64 aa5.65□□□□□ -1.5
TDP1-213ENST00000555880 KRTDAPP60985 99 aa5.65□□□□□ -1.5
TDP1-213ENST00000555880 TPTE2P1Q5T6R2 138 aa5.65□□□□□ -1.5
TDP1-213ENST00000555880 SHISA2Q6UWI4 295 aa5.65□□□□□ -1.5
TDP1-213ENST00000555880 ZNF705AQ6ZN79 300 aaPredicted RBP5.65□□□□□ -1.5
TDP1-213ENST00000555880 FAM231DQ6ZW35 169 aa5.65□□□□□ -1.5
TDP1-213ENST00000555880 ZNF329Q86UD4 541 aa5.65□□□□□ -1.5
TDP1-213ENST00000555880 ZCCHC24Q8N2G6 241 aaKnown RBP5.65□□□□□ -1.5
TDP1-213ENST00000555880 THAP8Q8NA92 274 aa5.65□□□□□ -1.5
TDP1-213ENST00000555880 NHLRC2Q8NBF2 726 aa5.65□□□□□ -1.5
TDP1-213ENST00000555880 ZNF596Q8TC21 504 aa5.65□□□□□ -1.5
TDP1-213ENST00000555880 VN1R17PQ8TDU5 208 aa5.65□□□□□ -1.5
TDP1-213ENST00000555880 FAM103A1Q9BTL3 118 aaKnown RBP5.65□□□□□ -1.5
TDP1-213ENST00000555880 SCNM1Q9BWG6 230 aa5.65□□□□□ -1.5
TDP1-213ENST00000555880 BOD1L1Q8NFC6 3051 aa5.65□□□□□ -1.5
TDP1-213ENST00000555880 MUC6Q6W4X9 2439 aa5.65□□□□□ -1.51
TDP1-213ENST00000555880 TCAPO15273 167 aa5.64□□□□□ -1.51
TDP1-213ENST00000555880 IGLV2-23P01705 113 aa5.64□□□□□ -1.51
TDP1-213ENST00000555880 GPX1P07203 203 aa5.64□□□□□ -1.51
TDP1-213ENST00000555880 PYYP10082 97 aa5.64□□□□□ -1.51
TDP1-213ENST00000555880 HIST1H1EP10412 219 aaKnown RBP5.64□□□□□ -1.51
TDP1-213ENST00000555880 SRIP30626 198 aa5.64□□□□□ -1.51
TDP1-213ENST00000555880 ZNF137PP52743 207 aa5.64□□□□□ -1.51
TDP1-213ENST00000555880 NUTF2P61970 127 aaKnown RBP5.64□□□□□ -1.51
TDP1-213ENST00000555880 C10orf55Q5SWW7 151 aa5.64□□□□□ -1.51
TDP1-213ENST00000555880 LINC00305Q7Z4B0 112 aa5.64□□□□□ -1.51
TDP1-213ENST00000555880 OR4B1Q8NGF8 309 aa5.64□□□□□ -1.51
TDP1-213ENST00000555880 GRAMD2BQ96HH9 432 aa5.64□□□□□ -1.51
TDP1-213ENST00000555880 TMEM68Q96MH6 324 aa5.64□□□□□ -1.51
TDP1-213ENST00000555880 MIEN1Q9BRT3 115 aa5.64□□□□□ -1.51
TDP1-213ENST00000555880 FNDC4Q9H6D8 234 aaPredicted RBP5.64□□□□□ -1.51
TDP1-213ENST00000555880 TNFRSF19Q9NS68 423 aa5.64□□□□□ -1.51
TDP1-213ENST00000555880 TBL2Q9Y4P3 447 aaKnown RBP5.64□□□□□ -1.51
TDP1-213ENST00000555880 ZGRF1Q86YA3 2104 aa5.64□□□□□ -1.51
TDP1-213ENST00000555880 DIRC3C9JPN6 131 aa5.64□□□□□ -1.51
TDP1-213ENST00000555880 F2Z2F3 143 aa5.64□□□□□ -1.51
TDP1-213ENST00000555880 K7EM74 188 aa5.64□□□□□ -1.51
TDP1-213ENST00000555880 CORTO00230 105 aa5.64□□□□□ -1.51
TDP1-213ENST00000555880 SLC25A5P05141 298 aaKnown RBP5.64□□□□□ -1.51
TDP1-213ENST00000555880 FRMD6-AS1P0C7T7 363 aa5.64□□□□□ -1.51
TDP1-213ENST00000555880 IGHV1-8P0DP01 117 aa5.64□□□□□ -1.51
TDP1-213ENST00000555880 ORM2P19652 201 aa5.64□□□□□ -1.51
TDP1-213ENST00000555880 RAB4AP20338 218 aa5.64□□□□□ -1.51
TDP1-213ENST00000555880 PMCHP20382 165 aa5.64□□□□□ -1.51
TDP1-213ENST00000555880 LOXP28300 417 aaPredicted RBP5.64□□□□□ -1.51
TDP1-213ENST00000555880 CDKN1AP38936 164 aa5.64□□□□□ -1.51
TDP1-213ENST00000555880 MFAP2P55001 183 aa5.64□□□□□ -1.51
TDP1-213ENST00000555880 SSBP2P81877 361 aaPredicted RBP5.64□□□□□ -1.51
TDP1-213ENST00000555880 NHLH1Q02575 133 aa5.64□□□□□ -1.51
TDP1-213ENST00000555880 TBR1Q16650 682 aa5.64□□□□□ -1.51
TDP1-213ENST00000555880 KIAA1644Q3SXP7 199 aa5.64□□□□□ -1.51
TDP1-213ENST00000555880 TMEM155Q4W5P6 130 aa5.64□□□□□ -1.51
TDP1-213ENST00000555880 MORN5Q5VZ52 161 aa5.64□□□□□ -1.51
TDP1-213ENST00000555880 LYPD2Q6UXB3 125 aa5.64□□□□□ -1.51
TDP1-213ENST00000555880 GFRALQ6UXV0 394 aa5.64□□□□□ -1.51
TDP1-213ENST00000555880 SPACA3Q8IXA5 215 aa5.64□□□□□ -1.51
TDP1-213ENST00000555880 OR1B1Q8NGR6 318 aa5.64□□□□□ -1.51
TDP1-213ENST00000555880 WIPF2Q8TF74 440 aaPredicted RBP5.64□□□□□ -1.51
TDP1-213ENST00000555880 TNFRSF14Q92956 283 aa5.64□□□□□ -1.51
TDP1-213ENST00000555880 RNASE6Q93091 150 aaKnown RBP5.64□□□□□ -1.51
TDP1-213ENST00000555880 ST6GALNAC6Q969X2 333 aa5.64□□□□□ -1.51
TDP1-213ENST00000555880 BORCS7Q96B45 105 aa5.64□□□□□ -1.51
TDP1-213ENST00000555880 SMIM12Q96EX1 92 aa5.64□□□□□ -1.51
TDP1-213ENST00000555880 SNHG12Q9BXW3 62 aa5.64□□□□□ -1.51
TDP1-213ENST00000555880 TMEM133Q9H2Q1 129 aa5.64□□□□□ -1.51
TDP1-213ENST00000555880 NRN1Q9NPD7 142 aa5.64□□□□□ -1.51
TDP1-213ENST00000555880 KAAG1Q9UBP8 84 aa5.64□□□□□ -1.51
TDP1-213ENST00000555880 SH3BGRL2Q9UJC5 107 aa5.64□□□□□ -1.51
TDP1-213ENST00000555880 PAM16Q9Y3D7 125 aa5.64□□□□□ -1.51
TDP1-213ENST00000555880 PKDREJQ9NTG1 2253 aa5.64□□□□□ -1.51
TDP1-213ENST00000555880 ACACAQ13085 2346 aa5.63□□□□□ -1.51
TDP1-213ENST00000555880 PCNX1Q96RV3 2341 aa5.63□□□□□ -1.51
TDP1-213ENST00000555880 RIF1Q5UIP0 2472 aaKnown RBP5.63□□□□□ -1.51
TDP1-213ENST00000555880 GVINP1Q7Z2Y8 2422 aa5.63□□□□□ -1.51
TDP1-213ENST00000555880 A0A1W2PPI3 338 aa5.63□□□□□ -1.51
TDP1-213ENST00000555880 CGB1A6NKQ9 187 aa5.63□□□□□ -1.51
TDP1-213ENST00000555880 E7EUB6 86 aa5.63□□□□□ -1.51
TDP1-213ENST00000555880 BMPR1BO00238 502 aa5.63□□□□□ -1.51
TDP1-213ENST00000555880 ZNF324O75467 553 aaPredicted RBP5.63□□□□□ -1.51
TDP1-213ENST00000555880 IGHV3-48P01763 117 aa5.63□□□□□ -1.51
TDP1-213ENST00000555880 REG1AP05451 166 aa5.63□□□□□ -1.51
TDP1-213ENST00000555880 THBDP07204 575 aa5.63□□□□□ -1.51
TDP1-213ENST00000555880 RPL27AP46776 148 aaKnown RBP5.63□□□□□ -1.51
TDP1-213ENST00000555880 PRRX1P54821 245 aa5.63□□□□□ -1.51
TDP1-213ENST00000555880 DIAPH2-AS1Q14236 149 aa5.63□□□□□ -1.51
TDP1-213ENST00000555880 TNXAQ16473 311 aa5.63□□□□□ -1.51
TDP1-213ENST00000555880 PRR27Q6MZM9 219 aa5.63□□□□□ -1.51
TDP1-213ENST00000555880 PATE2Q6UY27 113 aa5.63□□□□□ -1.51
TDP1-213ENST00000555880 TEX45Q8NA69 505 aa5.63□□□□□ -1.51
TDP1-213ENST00000555880 BLNKQ8WV28 456 aa5.63□□□□□ -1.51
TDP1-213ENST00000555880 FXYD5Q96DB9 178 aa5.63□□□□□ -1.51
TDP1-213ENST00000555880 LINC00479Q96M42 142 aa5.63□□□□□ -1.51
TDP1-213ENST00000555880 TRGV9Q99603 122 aa5.63□□□□□ -1.51
TDP1-213ENST00000555880 SSBP3Q9BWW4 388 aaPredicted RBP5.63□□□□□ -1.51
TDP1-213ENST00000555880 MSRB2Q9Y3D2 182 aa5.63□□□□□ -1.51
TDP1-213ENST00000555880 ZFHX4Q86UP3 3567 aa5.63□□□□□ -1.51
TDP1-213ENST00000555880 DMXL1Q9Y485 3027 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms