RNA–Protein interactions for RNA: ENST00000555854.1

VIPAS39-207, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5

Gene VIPAS39, Length 444 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-207ENST00000555854 KIR2DL5AQ8N109 375 aa6.84□□□□□ -1.31
VIPAS39-207ENST00000555854 GBGT1Q8N5D6 347 aa6.84□□□□□ -1.31
VIPAS39-207ENST00000555854 OR51S1Q8NGJ8 323 aa6.84□□□□□ -1.31
VIPAS39-207ENST00000555854 KIR2DL5BQ8NHK3 375 aa6.84□□□□□ -1.31
VIPAS39-207ENST00000555854 RBPMSQ93062 196 aaKnown RBP6.84□□□□□ -1.31
VIPAS39-207ENST00000555854 TRIM63Q969Q1 353 aa6.84□□□□□ -1.31
VIPAS39-207ENST00000555854 RNF183Q96D59 192 aa6.84□□□□□ -1.31
VIPAS39-207ENST00000555854 CACNG5Q9UF02 275 aa6.84□□□□□ -1.31
VIPAS39-207ENST00000555854 SPRY2O43597 315 aa6.83□□□□□ -1.32
VIPAS39-207ENST00000555854 B3GALNT1O75752 331 aa6.83□□□□□ -1.32
VIPAS39-207ENST00000555854 DFFBO76075 338 aa6.83□□□□□ -1.32
VIPAS39-207ENST00000555854 NXPH3O95157 252 aa6.83□□□□□ -1.32
VIPAS39-207ENST00000555854 SNCAP37840 140 aa6.83□□□□□ -1.32
VIPAS39-207ENST00000555854 NPBWR1P48145 328 aa6.83□□□□□ -1.32
VIPAS39-207ENST00000555854 APOC4P55056 127 aa6.83□□□□□ -1.32
VIPAS39-207ENST00000555854 SPCS3P61009 180 aa6.83□□□□□ -1.32
VIPAS39-207ENST00000555854 SUPT4H1P63272 117 aaKnown RBP6.83□□□□□ -1.32
VIPAS39-207ENST00000555854 TMEM187Q14656 261 aa6.83□□□□□ -1.32
VIPAS39-207ENST00000555854 NDUFA5Q16718 116 aa6.83□□□□□ -1.32
VIPAS39-207ENST00000555854 TIGITQ495A1 244 aa6.83□□□□□ -1.32
VIPAS39-207ENST00000555854 NMSQ5H8A3 153 aa6.83□□□□□ -1.32
VIPAS39-207ENST00000555854 TMEM268Q5VZI3 342 aa6.83□□□□□ -1.32
VIPAS39-207ENST00000555854 TCF24Q7RTU0 167 aa6.83□□□□□ -1.32
VIPAS39-207ENST00000555854 AKAP14Q86UN6 197 aa6.83□□□□□ -1.32
VIPAS39-207ENST00000555854 FAM219AQ8IW50 185 aa6.83□□□□□ -1.32
VIPAS39-207ENST00000555854 DUSP18Q8NEJ0 188 aa6.83□□□□□ -1.32
VIPAS39-207ENST00000555854 OR4X1Q8NH49 305 aa6.83□□□□□ -1.32
VIPAS39-207ENST00000555854 OR52E5Q8NH55 327 aa6.83□□□□□ -1.32
VIPAS39-207ENST00000555854 RRNAD1Q96FB5 475 aaKnown RBP6.83□□□□□ -1.32
VIPAS39-207ENST00000555854 GALNT14Q96FL9 552 aa6.83□□□□□ -1.32
VIPAS39-207ENST00000555854 SRRQ9GZT4 340 aa6.83□□□□□ -1.32
VIPAS39-207ENST00000555854 MS4A6AQ9H2W1 248 aa6.83□□□□□ -1.32
VIPAS39-207ENST00000555854 C14orf166Q9Y224 244 aaKnown RBP6.83□□□□□ -1.32
VIPAS39-207ENST00000555854 TMEM56-RWDD3S4R434 201 aa6.83□□□□□ -1.32
VIPAS39-207ENST00000555854 AGRNO00468 2067 aa6.82□□□□□ -1.32
VIPAS39-207ENST00000555854 DISC1C4P0D8 188 aa6.82□□□□□ -1.32
VIPAS39-207ENST00000555854 CORTO00230 105 aa6.82□□□□□ -1.32
VIPAS39-207ENST00000555854 ATG12O94817 140 aa6.82□□□□□ -1.32
VIPAS39-207ENST00000555854 IGLC1P0CG04 106 aa6.82□□□□□ -1.32
VIPAS39-207ENST00000555854 BMI1P35226 326 aa6.82□□□□□ -1.32
VIPAS39-207ENST00000555854 OPRK1P41145 380 aa6.82□□□□□ -1.32
VIPAS39-207ENST00000555854 PMS2P11Q13670 270 aa6.82□□□□□ -1.32
VIPAS39-207ENST00000555854 KLF9Q13886 244 aaPredicted RBP6.82□□□□□ -1.32
VIPAS39-207ENST00000555854 C2orf83Q53S99 150 aa6.82□□□□□ -1.32
VIPAS39-207ENST00000555854 PRSS54Q6PEW0 395 aa6.82□□□□□ -1.32
VIPAS39-207ENST00000555854 SLC24A4Q8NFF2 622 aa6.82□□□□□ -1.32
VIPAS39-207ENST00000555854 RNASE11Q8TAA1 199 aaKnown RBP6.82□□□□□ -1.32
VIPAS39-207ENST00000555854 DEDD2Q8WXF8 326 aa6.82□□□□□ -1.32
VIPAS39-207ENST00000555854 LINC00476Q8WZB0 136 aa6.82□□□□□ -1.32
VIPAS39-207ENST00000555854 PRRT1Q99946 306 aa6.82□□□□□ -1.32
VIPAS39-207ENST00000555854 C7orf50Q9BRJ6 194 aaKnown RBP6.82□□□□□ -1.32
VIPAS39-207ENST00000555854 GINS3Q9BRX5 216 aa6.82□□□□□ -1.32
VIPAS39-207ENST00000555854 PDCD10Q9BUL8 212 aa6.82□□□□□ -1.32
VIPAS39-207ENST00000555854 V9GYH0 126 aa6.82□□□□□ -1.32
VIPAS39-207ENST00000555854 PKHD1P08F94 4074 aa6.82□□□□□ -1.32
VIPAS39-207ENST00000555854 UBE2CO00762 179 aa6.81□□□□□ -1.32
VIPAS39-207ENST00000555854 GIG44P09565 113 aaPredicted RBP6.81□□□□□ -1.32
VIPAS39-207ENST00000555854 IL7P13232 177 aa6.81□□□□□ -1.32
VIPAS39-207ENST00000555854 CRYBB3P26998 211 aa6.81□□□□□ -1.32
VIPAS39-207ENST00000555854 EIF2B2P49770 351 aaKnown RBP6.81□□□□□ -1.32
VIPAS39-207ENST00000555854 RND2P52198 227 aa6.81□□□□□ -1.32
VIPAS39-207ENST00000555854 DHODHQ02127 395 aa6.81□□□□□ -1.32
VIPAS39-207ENST00000555854 ZNF79Q15937 498 aa6.81□□□□□ -1.32
VIPAS39-207ENST00000555854 TRIQKQ629K1 86 aa6.81□□□□□ -1.32
VIPAS39-207ENST00000555854 LEMD1Q68G75 181 aa6.81□□□□□ -1.32
VIPAS39-207ENST00000555854 STPG3Q8N7X2 389 aa6.81□□□□□ -1.32
VIPAS39-207ENST00000555854 IL22RA2Q969J5 263 aa6.81□□□□□ -1.32
VIPAS39-207ENST00000555854 SDHCQ99643 169 aaPredicted RBP6.81□□□□□ -1.32
VIPAS39-207ENST00000555854 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.81□□□□□ -1.32
VIPAS39-207ENST00000555854 U3KQE9 123 aa6.81□□□□□ -1.32
VIPAS39-207ENST00000555854 KIAA1109Q2LD37 5005 aa6.81□□□□□ -1.32
VIPAS39-207ENST00000555854 TRAV2A0A0B4J234 112 aa6.8□□□□□ -1.32
VIPAS39-207ENST00000555854 CENPXA8MT69 81 aa6.8□□□□□ -1.32
VIPAS39-207ENST00000555854 K7EQG2 157 aa6.8□□□□□ -1.32
VIPAS39-207ENST00000555854 JTBO76095 146 aa6.8□□□□□ -1.32
VIPAS39-207ENST00000555854 ATF4P18848 351 aaPredicted RBP6.8□□□□□ -1.32
VIPAS39-207ENST00000555854 C4BPBP20851 252 aa6.8□□□□□ -1.32
VIPAS39-207ENST00000555854 HTR2BP41595 481 aa6.8□□□□□ -1.32
VIPAS39-207ENST00000555854 P2RY1P47900 373 aa6.8□□□□□ -1.32
VIPAS39-207ENST00000555854 INPP1P49441 399 aa6.8□□□□□ -1.32
VIPAS39-207ENST00000555854 DEFB131AP59861 70 aa6.8□□□□□ -1.32
VIPAS39-207ENST00000555854 RBMS2Q15434 407 aaKnown RBP6.8□□□□□ -1.32
VIPAS39-207ENST00000555854 USF2Q15853 346 aaPredicted RBP6.8□□□□□ -1.32
VIPAS39-207ENST00000555854 PYDC2Q56P42 97 aa6.8□□□□□ -1.32
VIPAS39-207ENST00000555854 LYZL2Q7Z4W2 148 aa6.8□□□□□ -1.32
VIPAS39-207ENST00000555854 DCANP1Q8TF63 244 aa6.8□□□□□ -1.32
VIPAS39-207ENST00000555854 GLMPQ8WWB7 406 aa6.8□□□□□ -1.32
VIPAS39-207ENST00000555854 CSTL1Q9H114 145 aa6.8□□□□□ -1.32
VIPAS39-207ENST00000555854 ENY2Q9NPA8 101 aa6.8□□□□□ -1.32
VIPAS39-207ENST00000555854 HSPB7Q9UBY9 170 aa6.8□□□□□ -1.32
VIPAS39-207ENST00000555854 PCLOQ9Y6V0 5065 aa6.79□□□□□ -1.32
VIPAS39-207ENST00000555854 IGKV1D-37A0A075B6S9 117 aa6.79□□□□□ -1.32
VIPAS39-207ENST00000555854 A0A0B4J2A0 478 aa6.79□□□□□ -1.32
VIPAS39-207ENST00000555854 CXorf65A6NEN9 183 aa6.79□□□□□ -1.32
VIPAS39-207ENST00000555854 CEBPZOSA8MTT3 80 aa6.79□□□□□ -1.32
VIPAS39-207ENST00000555854 CCNKO75909 580 aa6.79□□□□□ -1.32
VIPAS39-207ENST00000555854 SULT1A3P0DMM9 295 aa6.79□□□□□ -1.32
VIPAS39-207ENST00000555854 SULT1A4P0DMN0 295 aa6.79□□□□□ -1.32
VIPAS39-207ENST00000555854 NPY1RP25929 384 aa6.79□□□□□ -1.32
VIPAS39-207ENST00000555854 SUB1P53999 127 aaKnown RBP eCLIP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms