RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 ACSM6Q6P461 480 aa7.96□□□□□ -1.13
SRP54-208ENST00000555557 TEPPQ6URK8 271 aa7.96□□□□□ -1.13
SRP54-208ENST00000555557 TMEM144Q7Z5S9 345 aa7.96□□□□□ -1.13
SRP54-208ENST00000555557 Q8N2B8 174 aa7.96□□□□□ -1.13
SRP54-208ENST00000555557 OR2G3Q8NGZ4 309 aa7.96□□□□□ -1.13
SRP54-208ENST00000555557 NPCDR1Q9BY65 106 aa7.96□□□□□ -1.13
SRP54-208ENST00000555557 SERTAD4Q9NUC0 356 aa7.96□□□□□ -1.13
SRP54-208ENST00000555557 LSM4Q9Y4Z0 139 aaKnown RBP7.96□□□□□ -1.13
SRP54-208ENST00000555557 NF1P21359 2839 aa7.96□□□□□ -1.14
SRP54-208ENST00000555557 AGPAT2O15120 278 aa7.95□□□□□ -1.14
SRP54-208ENST00000555557 TRGV3P03979 118 aa7.95□□□□□ -1.14
SRP54-208ENST00000555557 CRYBA1P05813 215 aa7.95□□□□□ -1.14
SRP54-208ENST00000555557 PF4V1P10720 104 aa7.95□□□□□ -1.14
SRP54-208ENST00000555557 GATA2P23769 480 aaPredicted RBP7.95□□□□□ -1.14
SRP54-208ENST00000555557 FAM209BQ5JX69 171 aa7.95□□□□□ -1.14
SRP54-208ENST00000555557 TMEM182Q6ZP80 229 aaPredicted RBP7.95□□□□□ -1.14
SRP54-208ENST00000555557 PARD6GQ9BYG4 376 aaPredicted RBP7.95□□□□□ -1.14
SRP54-208ENST00000555557 THYN1Q9P016 225 aa7.95□□□□□ -1.14
SRP54-208ENST00000555557 IGKV1D-37A0A075B6S9 117 aa7.95□□□□□ -1.14
SRP54-208ENST00000555557 FAM74A7A6NL05 159 aa7.95□□□□□ -1.14
SRP54-208ENST00000555557 FNDC10F2Z333 226 aa7.95□□□□□ -1.14
SRP54-208ENST00000555557 CYB5BO43169 146 aa7.95□□□□□ -1.14
SRP54-208ENST00000555557 HIST1H1BP16401 226 aaKnown RBP7.95□□□□□ -1.14
SRP54-208ENST00000555557 OR10J1P30954 320 aa7.95□□□□□ -1.14
SRP54-208ENST00000555557 CAMLGP49069 296 aa7.95□□□□□ -1.14
SRP54-208ENST00000555557 ZNF90Q03938 601 aa7.95□□□□□ -1.14
SRP54-208ENST00000555557 FAM74A3Q4VXF1 159 aa7.95□□□□□ -1.14
SRP54-208ENST00000555557 TMEM116Q8NCL8 245 aa7.95□□□□□ -1.14
SRP54-208ENST00000555557 GNPNAT1Q96EK6 184 aaPredicted RBP7.95□□□□□ -1.14
SRP54-208ENST00000555557 GGTLC1Q9BX51 225 aa7.95□□□□□ -1.14
SRP54-208ENST00000555557 VSIRQ9H7M9 311 aa7.95□□□□□ -1.14
SRP54-208ENST00000555557 ZFP92A6NM28 416 aa7.94□□□□□ -1.14
SRP54-208ENST00000555557 F8W735 103 aaPredicted RBP7.94□□□□□ -1.14
SRP54-208ENST00000555557 IGLV1-40P01703 118 aa7.94□□□□□ -1.14
SRP54-208ENST00000555557 SEC11BP0C7V7 166 aa7.94□□□□□ -1.14
SRP54-208ENST00000555557 ELLP55199 621 aaPredicted RBP7.94□□□□□ -1.14
SRP54-208ENST00000555557 TPPP2P59282 170 aa7.94□□□□□ -1.14
SRP54-208ENST00000555557 MIC13Q5XKP0 118 aa7.94□□□□□ -1.14
SRP54-208ENST00000555557 CENPVQ7Z7K6 275 aaPredicted RBP7.94□□□□□ -1.14
SRP54-208ENST00000555557 NECAP1Q8NC96 275 aa7.94□□□□□ -1.14
SRP54-208ENST00000555557 OR4X1Q8NH49 305 aa7.94□□□□□ -1.14
SRP54-208ENST00000555557 PHYHIPLQ96FC7 376 aa7.94□□□□□ -1.14
SRP54-208ENST00000555557 C21orf62Q9NYP8 219 aa7.94□□□□□ -1.14
SRP54-208ENST00000555557 PSMB11A5LHX3 300 aa7.93□□□□□ -1.14
SRP54-208ENST00000555557 OR2T8A6NH00 312 aa7.93□□□□□ -1.14
SRP54-208ENST00000555557 TEX46H3BTG2 121 aa7.93□□□□□ -1.14
SRP54-208ENST00000555557 HAX1O00165 279 aa7.93□□□□□ -1.14
SRP54-208ENST00000555557 TCF21O43680 179 aa7.93□□□□□ -1.14
SRP54-208ENST00000555557 GATCO43716 136 aaKnown RBP7.93□□□□□ -1.14
SRP54-208ENST00000555557 IGHG4P01861 327 aa7.93□□□□□ -1.14
SRP54-208ENST00000555557 FHITP49789 147 aa7.93□□□□□ -1.14
SRP54-208ENST00000555557 RAB9AP51151 201 aa7.93□□□□□ -1.14
SRP54-208ENST00000555557 KLK9Q2XQG4 91 aa7.93□□□□□ -1.14
SRP54-208ENST00000555557 Q56UQ5 140 aa7.93□□□□□ -1.14
SRP54-208ENST00000555557 GCSAMLQ5JQS6 135 aa7.93□□□□□ -1.14
SRP54-208ENST00000555557 HIST2H2BDQ6DRA6 164 aa7.93□□□□□ -1.14
SRP54-208ENST00000555557 ZNF709Q8N972 641 aa7.93□□□□□ -1.14
SRP54-208ENST00000555557 BPIFCQ8NFQ6 507 aa7.93□□□□□ -1.14
SRP54-208ENST00000555557 JMJD8Q96S16 334 aa7.93□□□□□ -1.14
SRP54-208ENST00000555557 ZNF580Q9UK33 172 aa7.93□□□□□ -1.14
SRP54-208ENST00000555557 KLK9Q9UKQ9 250 aa7.93□□□□□ -1.14
SRP54-208ENST00000555557 C17orf112F2Z3M2 114 aa7.93□□□□□ -1.14
SRP54-208ENST00000555557 MPDU1O75352 247 aa7.93□□□□□ -1.14
SRP54-208ENST00000555557 CLN5O75503 358 aa7.93□□□□□ -1.14
SRP54-208ENST00000555557 EIF3GO75821 320 aaKnown RBP eCLIP7.93□□□□□ -1.14
SRP54-208ENST00000555557 IGHV3-11P01762 117 aa7.93□□□□□ -1.14
SRP54-208ENST00000555557 S100A9P06702 114 aaKnown RBP7.93□□□□□ -1.14
SRP54-208ENST00000555557 FABP1P07148 127 aa7.93□□□□□ -1.14
SRP54-208ENST00000555557 IGLC1P0CG04 106 aa7.93□□□□□ -1.14
SRP54-208ENST00000555557 PSMB8P28062 276 aa7.93□□□□□ -1.14
SRP54-208ENST00000555557 MFAP4P55083 255 aa7.93□□□□□ -1.14
SRP54-208ENST00000555557 ATP5G2Q06055 141 aa7.93□□□□□ -1.14
SRP54-208ENST00000555557 TIGITQ495A1 244 aa7.93□□□□□ -1.14
SRP54-208ENST00000555557 EIF5AL1Q6IS14 154 aaKnown RBP7.93□□□□□ -1.14
SRP54-208ENST00000555557 UQCC3Q6UW78 93 aa7.93□□□□□ -1.14
SRP54-208ENST00000555557 THAP8Q8NA92 274 aa7.93□□□□□ -1.14
SRP54-208ENST00000555557 SLC45A2Q9UMX9 530 aa7.93□□□□□ -1.14
SRP54-208ENST00000555557 PXMP4Q9Y6I8 212 aa7.93□□□□□ -1.14
SRP54-208ENST00000555557 LINC00587B1AMM8 73 aa7.92□□□□□ -1.14
SRP54-208ENST00000555557 GNG7O60262 68 aa7.92□□□□□ -1.14
SRP54-208ENST00000555557 IGKV1-17P01599 117 aa7.92□□□□□ -1.14
SRP54-208ENST00000555557 RPLP1P05386 114 aaKnown RBP7.92□□□□□ -1.14
SRP54-208ENST00000555557 CLEC3BP05452 202 aa7.92□□□□□ -1.14
SRP54-208ENST00000555557 NPBWR1P48145 328 aa7.92□□□□□ -1.14
SRP54-208ENST00000555557 SLC35B1P78383 322 aa7.92□□□□□ -1.14
SRP54-208ENST00000555557 RAB31Q13636 194 aa7.92□□□□□ -1.14
SRP54-208ENST00000555557 FFAR4Q5NUL3 377 aa7.92□□□□□ -1.14
SRP54-208ENST00000555557 CLEC19AQ6UXS0 136 aa7.92□□□□□ -1.14
SRP54-208ENST00000555557 CYP2G1PQ6ZSU1 146 aa7.92□□□□□ -1.14
SRP54-208ENST00000555557 STPG3Q8N7X2 389 aa7.92□□□□□ -1.14
SRP54-208ENST00000555557 ZNF502Q8TBZ5 544 aa7.92□□□□□ -1.14
SRP54-208ENST00000555557 VN1R17PQ8TDU5 208 aa7.92□□□□□ -1.14
SRP54-208ENST00000555557 CCDC140Q96MF4 163 aa7.92□□□□□ -1.14
SRP54-208ENST00000555557 OR5B12Q96R08 314 aa7.92□□□□□ -1.14
SRP54-208ENST00000555557 PSMG3Q9BT73 122 aaPredicted RBP7.92□□□□□ -1.14
SRP54-208ENST00000555557 TIMM9Q9Y5J7 89 aa7.92□□□□□ -1.14
SRP54-208ENST00000555557 IGHV3-35A0A0C4DH35 117 aa7.91□□□□□ -1.14
SRP54-208ENST00000555557 TCRBV4S1A1TA0A5B7 111 aa7.91□□□□□ -1.14
SRP54-208ENST00000555557 FAM223BA6NKX1 122 aa7.91□□□□□ -1.14
SRP54-208ENST00000555557 H3BUA1 57 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms