RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 UBQLN2Q9UHD9 624 aa10.19□□□□□ -0.78
SNX6-203ENST00000555416 LYRM1O43325 122 aa10.18□□□□□ -0.78
SNX6-203ENST00000555416 ODF3L2Q3SX64 289 aa10.18□□□□□ -0.78
SNX6-203ENST00000555416 SLC16A13Q7RTY0 426 aa10.18□□□□□ -0.78
SNX6-203ENST00000555416 LYG2Q86SG7 212 aa10.18□□□□□ -0.78
SNX6-203ENST00000555416 ACY3Q96HD9 319 aa10.18□□□□□ -0.78
SNX6-203ENST00000555416 SPAG8Q99932 426 aaPredicted RBP10.18□□□□□ -0.78
SNX6-203ENST00000555416 VSIRQ9H7M9 311 aa10.18□□□□□ -0.78
SNX6-203ENST00000555416 TMED3Q9Y3Q3 217 aa10.18□□□□□ -0.78
SNX6-203ENST00000555416 U3KQ87 197 aa10.18□□□□□ -0.78
SNX6-203ENST00000555416 IGKV3-7A0A075B6H7 116 aa10.17□□□□□ -0.78
SNX6-203ENST00000555416 RPS10-NUDT3A0A1W2PQS6 291 aa10.17□□□□□ -0.78
SNX6-203ENST00000555416 CENPXA8MT69 81 aa10.17□□□□□ -0.78
SNX6-203ENST00000555416 OR10J1P30954 320 aa10.17□□□□□ -0.78
SNX6-203ENST00000555416 C20orf85Q9H1P6 137 aa10.17□□□□□ -0.78
SNX6-203ENST00000555416 CACFD1Q9UGQ2 172 aa10.17□□□□□ -0.78
SNX6-203ENST00000555416 TBC1D24Q9ULP9 559 aa10.17□□□□□ -0.78
SNX6-203ENST00000555416 DFFBO76075 338 aa10.16□□□□□ -0.78
SNX6-203ENST00000555416 TCRBP04435 133 aa10.16□□□□□ -0.78
SNX6-203ENST00000555416 SLC25A4P12235 298 aa10.16□□□□□ -0.78
SNX6-203ENST00000555416 TFPI2P48307 235 aa10.16□□□□□ -0.78
SNX6-203ENST00000555416 ZNF124Q15973 351 aa10.16□□□□□ -0.78
SNX6-203ENST00000555416 C4orf46Q504U0 113 aa10.16□□□□□ -0.78
SNX6-203ENST00000555416 LAMTOR1Q6IAA8 161 aa10.16□□□□□ -0.78
SNX6-203ENST00000555416 TCF24Q7RTU0 167 aa10.16□□□□□ -0.78
SNX6-203ENST00000555416 GBGT1Q8N5D6 347 aa10.16□□□□□ -0.78
SNX6-203ENST00000555416 OR1S2Q8NGQ3 325 aa10.16□□□□□ -0.78
SNX6-203ENST00000555416 FAM110AQ9BQ89 295 aa10.16□□□□□ -0.78
SNX6-203ENST00000555416 GINS3Q9BRX5 216 aa10.16□□□□□ -0.78
SNX6-203ENST00000555416 CCDC32Q9BV29 185 aa10.16□□□□□ -0.78
SNX6-203ENST00000555416 ZMAT4Q9H898 229 aa10.16□□□□□ -0.78
SNX6-203ENST00000555416 IGKV1D-37A0A075B6S9 117 aa10.15□□□□□ -0.78
SNX6-203ENST00000555416 TRAV6A0A075B6T7 132 aa10.15□□□□□ -0.78
SNX6-203ENST00000555416 FAM90A26D6RGX4 464 aa10.15□□□□□ -0.78
SNX6-203ENST00000555416 WRBO00258 174 aa10.15□□□□□ -0.78
SNX6-203ENST00000555416 SYNGR2O43760 224 aa10.15□□□□□ -0.78
SNX6-203ENST00000555416 IFNA4P05014 189 aa10.15□□□□□ -0.78
SNX6-203ENST00000555416 CRYBB3P26998 211 aa10.15□□□□□ -0.78
SNX6-203ENST00000555416 GAMTQ14353 236 aa10.15□□□□□ -0.78
SNX6-203ENST00000555416 TRAV30A0A087WSZ9 112 aa10.14□□□□□ -0.79
SNX6-203ENST00000555416 PIGBOS1A0A0B4J2F0 54 aa10.14□□□□□ -0.79
SNX6-203ENST00000555416 PRSS46E5RG02 174 aa10.14□□□□□ -0.79
SNX6-203ENST00000555416 H3BP45 60 aa10.14□□□□□ -0.79
SNX6-203ENST00000555416 NPPCP23582 126 aa10.14□□□□□ -0.79
SNX6-203ENST00000555416 YPEL3P61236 119 aaPredicted RBP10.14□□□□□ -0.79
SNX6-203ENST00000555416 POLR2GP62487 172 aaKnown RBP eCLIP10.14□□□□□ -0.79
SNX6-203ENST00000555416 IFITM3Q01628 133 aa10.14□□□□□ -0.79
SNX6-203ENST00000555416 ID3Q02535 119 aa10.14□□□□□ -0.79
SNX6-203ENST00000555416 USF2Q15853 346 aaPredicted RBP10.14□□□□□ -0.79
SNX6-203ENST00000555416 ETFRF1Q6IPR1 90 aa10.14□□□□□ -0.79
SNX6-203ENST00000555416 LINC00299Q6ZSB3 139 aa10.14□□□□□ -0.79
SNX6-203ENST00000555416 NOXA1Q86UR1 476 aa10.14□□□□□ -0.79
SNX6-203ENST00000555416 APRG1Q8IVJ8 170 aa10.14□□□□□ -0.79
SNX6-203ENST00000555416 FAM24BQ8N5W8 94 aa10.14□□□□□ -0.79
SNX6-203ENST00000555416 OR4D5Q8NGN0 318 aa10.14□□□□□ -0.79
SNX6-203ENST00000555416 COQ8AQ8NI60 647 aa10.14□□□□□ -0.79
SNX6-203ENST00000555416 MITD1Q8WV92 249 aa10.14□□□□□ -0.79
SNX6-203ENST00000555416 SPATA25Q9BR10 227 aa10.14□□□□□ -0.79
SNX6-203ENST00000555416 SEC22CQ9BRL7 303 aa10.14□□□□□ -0.79
SNX6-203ENST00000555416 NUDT15Q9NV35 164 aa10.14□□□□□ -0.79
SNX6-203ENST00000555416 U3KQE9 123 aa10.14□□□□□ -0.79
SNX6-203ENST00000555416 IGKV1OR2-108A0A075B7D4 117 aa10.13□□□□□ -0.79
SNX6-203ENST00000555416 OR4C46A6NHA9 309 aa10.13□□□□□ -0.79
SNX6-203ENST00000555416 CCSO14618 274 aa10.13□□□□□ -0.79
SNX6-203ENST00000555416 PSG1P11464 419 aa10.13□□□□□ -0.79
SNX6-203ENST00000555416 ZNF90Q03938 601 aa10.13□□□□□ -0.79
SNX6-203ENST00000555416 WFDC3Q8IUB2 231 aa10.13□□□□□ -0.79
SNX6-203ENST00000555416 MS4A6AQ9H2W1 248 aa10.13□□□□□ -0.79
SNX6-203ENST00000555416 EDA2RQ9HAV5 297 aa10.13□□□□□ -0.79
SNX6-203ENST00000555416 PTTG2Q9NZH5 202 aa10.13□□□□□ -0.79
SNX6-203ENST00000555416 PAIP2BQ9ULR5 123 aaKnown RBP10.13□□□□□ -0.79
SNX6-203ENST00000555416 MED6O75586 246 aa10.12□□□□□ -0.79
SNX6-203ENST00000555416 CCNKO75909 580 aa10.12□□□□□ -0.79
SNX6-203ENST00000555416 TOMM40O96008 361 aa10.12□□□□□ -0.79
SNX6-203ENST00000555416 IL4P05112 153 aa10.12□□□□□ -0.79
SNX6-203ENST00000555416 RD3LP0DJH9 198 aa10.12□□□□□ -0.79
SNX6-203ENST00000555416 GPX4P36969 197 aaPredicted RBP10.12□□□□□ -0.79
SNX6-203ENST00000555416 P2RY1P47900 373 aa10.12□□□□□ -0.79
SNX6-203ENST00000555416 PAX9P55771 341 aa10.12□□□□□ -0.79
SNX6-203ENST00000555416 ATP5IP56385 69 aaPredicted RBP10.12□□□□□ -0.79
SNX6-203ENST00000555416 SPANXN5Q5MJ07 72 aa10.12□□□□□ -0.79
SNX6-203ENST00000555416 Q8WTZ3 238 aa10.12□□□□□ -0.79
SNX6-203ENST00000555416 S100ZQ8WXG8 99 aa10.12□□□□□ -0.79
SNX6-203ENST00000555416 METTL26Q96S19 204 aa10.12□□□□□ -0.79
SNX6-203ENST00000555416 GGTLC1Q9BX51 225 aa10.12□□□□□ -0.79
SNX6-203ENST00000555416 MAP6D1Q9H9H5 199 aa10.12□□□□□ -0.79
SNX6-203ENST00000555416 DNAH7Q8WXX0 4024 aa10.11□□□□□ -0.79
SNX6-203ENST00000555416 LOC102724200A0A096LPH7 203 aaPredicted RBP10.11□□□□□ -0.79
SNX6-203ENST00000555416 NKX2-1P43699 371 aaPredicted RBP10.11□□□□□ -0.79
SNX6-203ENST00000555416 ASAH1Q13510 395 aa10.11□□□□□ -0.79
SNX6-203ENST00000555416 IAH1Q2TAA2 248 aaPredicted RBP10.11□□□□□ -0.79
SNX6-203ENST00000555416 STPG3Q8N7X2 389 aa10.11□□□□□ -0.79
SNX6-203ENST00000555416 ZBTB8BQ8NAP8 495 aaPredicted RBP10.11□□□□□ -0.79
SNX6-203ENST00000555416 OR51G1Q8NGK1 321 aa10.11□□□□□ -0.79
SNX6-203ENST00000555416 SLC35E1Q96K37 410 aa10.11□□□□□ -0.79
SNX6-203ENST00000555416 CIB3Q96Q77 187 aaPredicted RBP10.11□□□□□ -0.79
SNX6-203ENST00000555416 KMT2CQ8NEZ4 4911 aaKnown RBP10.11□□□□□ -0.79
SNX6-203ENST00000555416 ZFP92A6NM28 416 aa10.1□□□□□ -0.79
SNX6-203ENST00000555416 SSSCA1O60232 199 aa10.1□□□□□ -0.79
SNX6-203ENST00000555416 SCGB2A1O75556 95 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms