RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 OR10C1Q96KK4 312 aa9.12□□□□□ -0.95
SRP54-206ENST00000555317 TMEM231Q9H6L2 316 aa9.12□□□□□ -0.95
SRP54-206ENST00000555317 IGHV3-49A0A0A0MS15 119 aa9.11□□□□□ -0.95
SRP54-206ENST00000555317 ZNF785A8K8V0 405 aa9.11□□□□□ -0.95
SRP54-206ENST00000555317 UPK1BO75841 260 aa9.11□□□□□ -0.95
SRP54-206ENST00000555317 SCGB1D2O95969 90 aa9.11□□□□□ -0.95
SRP54-206ENST00000555317 H2AFB2P0C5Z0 115 aa9.11□□□□□ -0.95
SRP54-206ENST00000555317 NKX2-1P43699 371 aaPredicted RBP9.11□□□□□ -0.95
SRP54-206ENST00000555317 MLANAQ16655 118 aa9.11□□□□□ -0.95
SRP54-206ENST00000555317 IAH1Q2TAA2 248 aaPredicted RBP9.11□□□□□ -0.95
SRP54-206ENST00000555317 TIGITQ495A1 244 aa9.11□□□□□ -0.95
SRP54-206ENST00000555317 MITD1Q8WV92 249 aa9.11□□□□□ -0.95
SRP54-206ENST00000555317 METTL26Q96S19 204 aa9.11□□□□□ -0.95
SRP54-206ENST00000555317 SPAG8Q99932 426 aaPredicted RBP9.11□□□□□ -0.95
SRP54-206ENST00000555317 RHPN1-AS1Q9BWJ2 59 aa9.11□□□□□ -0.95
SRP54-206ENST00000555317 ZMAT4Q9H898 229 aa9.11□□□□□ -0.95
SRP54-206ENST00000555317 SMPXQ9UHP9 88 aa9.11□□□□□ -0.95
SRP54-206ENST00000555317 NBEAL2Q6ZNJ1 2754 aa9.1□□□□□ -0.95
SRP54-206ENST00000555317 IGHV3OR16-13A0A075B7E8 117 aa9.1□□□□□ -0.95
SRP54-206ENST00000555317 IGHV3-74A0A0B4J1X5 117 aa9.1□□□□□ -0.95
SRP54-206ENST00000555317 A0A1W2PS18 150 aa9.1□□□□□ -0.95
SRP54-206ENST00000555317 OR4C46A6NHA9 309 aa9.1□□□□□ -0.95
SRP54-206ENST00000555317 FAM25EA8MYX2 175 aa9.1□□□□□ -0.95
SRP54-206ENST00000555317 OR11H12B2RN74 326 aa9.1□□□□□ -0.95
SRP54-206ENST00000555317 TSPAN4O14817 238 aa9.1□□□□□ -0.95
SRP54-206ENST00000555317 CD5P06127 495 aa9.1□□□□□ -0.95
SRP54-206ENST00000555317 FABP1P07148 127 aa9.1□□□□□ -0.95
SRP54-206ENST00000555317 CD7P09564 240 aa9.1□□□□□ -0.95
SRP54-206ENST00000555317 NPPCP23582 126 aa9.1□□□□□ -0.95
SRP54-206ENST00000555317 GPX4P36969 197 aaPredicted RBP9.1□□□□□ -0.95
SRP54-206ENST00000555317 DEFA1P59665 94 aa9.1□□□□□ -0.95
SRP54-206ENST00000555317 DEFA3P59666 94 aa9.1□□□□□ -0.95
SRP54-206ENST00000555317 Q8WTZ3 238 aa9.1□□□□□ -0.95
SRP54-206ENST00000555317 TMEM170AQ8WVE7 144 aa9.1□□□□□ -0.95
SRP54-206ENST00000555317 NPIPB3Q92617 1050 aa9.1□□□□□ -0.95
SRP54-206ENST00000555317 SRD5A3Q9H8P0 318 aa9.1□□□□□ -0.95
SRP54-206ENST00000555317 MRPL36Q9P0J6 103 aaKnown RBP9.1□□□□□ -0.95
SRP54-206ENST00000555317 GSKIPQ9P0R6 139 aa9.1□□□□□ -0.95
SRP54-206ENST00000555317 TBC1D24Q9ULP9 559 aa9.1□□□□□ -0.95
SRP54-206ENST00000555317 STRAPQ9Y3F4 350 aaKnown RBP9.1□□□□□ -0.95
SRP54-206ENST00000555317 ZFP92A6NM28 416 aa9.09□□□□□ -0.95
SRP54-206ENST00000555317 A8MZ25 164 aa9.09□□□□□ -0.95
SRP54-206ENST00000555317 CHEK1O14757 476 aa9.09□□□□□ -0.95
SRP54-206ENST00000555317 SSSCA1O60232 199 aa9.09□□□□□ -0.95
SRP54-206ENST00000555317 IGKV1-17P01599 117 aa9.09□□□□□ -0.95
SRP54-206ENST00000555317 IGLC1P0CG04 106 aa9.09□□□□□ -0.95
SRP54-206ENST00000555317 YPEL3P61236 119 aaPredicted RBP9.09□□□□□ -0.95
SRP54-206ENST00000555317 RPL11P62913 178 aaKnown RBP9.09□□□□□ -0.95
SRP54-206ENST00000555317 PAFAH1B2P68402 229 aa9.09□□□□□ -0.95
SRP54-206ENST00000555317 SPANXN5Q5MJ07 72 aa9.09□□□□□ -0.95
SRP54-206ENST00000555317 SBSPONQ8IVN8 264 aa9.09□□□□□ -0.95
SRP54-206ENST00000555317 ZNF431Q8TF32 576 aaPredicted RBP9.09□□□□□ -0.95
SRP54-206ENST00000555317 GRAMD2BQ96HH9 432 aa9.09□□□□□ -0.95
SRP54-206ENST00000555317 RNF2Q99496 336 aa9.09□□□□□ -0.95
SRP54-206ENST00000555317 SEC22CQ9BRL7 303 aa9.09□□□□□ -0.95
SRP54-206ENST00000555317 ZFAND3Q9H8U3 227 aa9.09□□□□□ -0.95
SRP54-206ENST00000555317 U3KQK5 164 aa9.09□□□□□ -0.95
SRP54-206ENST00000555317 TENM3Q9P273 2699 aa9.09□□□□□ -0.95
SRP54-206ENST00000555317 C5orf51A6NDU8 294 aa9.08□□□□□ -0.96
SRP54-206ENST00000555317 MPTX1A8MV57 137 aa9.08□□□□□ -0.96
SRP54-206ENST00000555317 H3BP45 60 aa9.08□□□□□ -0.96
SRP54-206ENST00000555317 IL4P05112 153 aa9.08□□□□□ -0.96
SRP54-206ENST00000555317 RD3LP0DJH9 198 aa9.08□□□□□ -0.96
SRP54-206ENST00000555317 POLR2GP62487 172 aaKnown RBP eCLIP9.08□□□□□ -0.96
SRP54-206ENST00000555317 C12orf45Q8N5I9 185 aaPredicted RBP9.08□□□□□ -0.96
SRP54-206ENST00000555317 DEFB125Q8N687 156 aa9.08□□□□□ -0.96
SRP54-206ENST00000555317 ZBTB8BQ8NAP8 495 aaPredicted RBP9.08□□□□□ -0.96
SRP54-206ENST00000555317 OR4D5Q8NGN0 318 aa9.08□□□□□ -0.96
SRP54-206ENST00000555317 ST8SIA2Q92186 375 aa9.08□□□□□ -0.96
SRP54-206ENST00000555317 GPN1Q9HCN4 374 aaPredicted RBP9.08□□□□□ -0.96
SRP54-206ENST00000555317 C19orf73Q9NVV2 129 aa9.08□□□□□ -0.96
SRP54-206ENST00000555317 PSENENQ9NZ42 101 aa9.08□□□□□ -0.96
SRP54-206ENST00000555317 IGKV3-7A0A075B6H7 116 aa9.07□□□□□ -0.96
SRP54-206ENST00000555317 IGHV3-66A0A0C4DH42 116 aa9.07□□□□□ -0.96
SRP54-206ENST00000555317 DNASE2O00115 360 aaPredicted RBP9.07□□□□□ -0.96
SRP54-206ENST00000555317 NUP62P37198 522 aaPredicted RBP9.07□□□□□ -0.96
SRP54-206ENST00000555317 TFPI2P48307 235 aa9.07□□□□□ -0.96
SRP54-206ENST00000555317 EIF2B2P49770 351 aaKnown RBP9.07□□□□□ -0.96
SRP54-206ENST00000555317 ID3Q02535 119 aa9.07□□□□□ -0.96
SRP54-206ENST00000555317 AKR1C1Q04828 323 aa9.07□□□□□ -0.96
SRP54-206ENST00000555317 GAMTQ14353 236 aa9.07□□□□□ -0.96
SRP54-206ENST00000555317 TCF24Q7RTU0 167 aa9.07□□□□□ -0.96
SRP54-206ENST00000555317 RAB40CQ96S21 281 aa9.07□□□□□ -0.96
SRP54-206ENST00000555317 WFDC10AQ9H1F0 79 aa9.07□□□□□ -0.96
SRP54-206ENST00000555317 PFDN2Q9UHV9 154 aa9.07□□□□□ -0.96
SRP54-206ENST00000555317 DNAH9Q9NYC9 4486 aa9.06□□□□□ -0.96
SRP54-206ENST00000555317 SMCO3A2RU48 225 aa9.06□□□□□ -0.96
SRP54-206ENST00000555317 L7N2F9 121 aa9.06□□□□□ -0.96
SRP54-206ENST00000555317 CCSO14618 274 aa9.06□□□□□ -0.96
SRP54-206ENST00000555317 TOMM40O96008 361 aa9.06□□□□□ -0.96
SRP54-206ENST00000555317 HNRNPCP07910 306 aaKnown RBP eCLIP9.06□□□□□ -0.968e-8■■■■□ 23.5
SRP54-206ENST00000555317 CMC4P56277 68 aaPredicted RBP9.06□□□□□ -0.96
SRP54-206ENST00000555317 VAMP2P63027 116 aa9.06□□□□□ -0.96
SRP54-206ENST00000555317 GBGT1Q8N5D6 347 aa9.06□□□□□ -0.96
SRP54-206ENST00000555317 OR51G1Q8NGK1 321 aa9.06□□□□□ -0.96
SRP54-206ENST00000555317 ZNF414Q96IQ9 312 aa9.06□□□□□ -0.96
SRP54-206ENST00000555317 RCHY1Q96PM5 261 aa9.06□□□□□ -0.96
SRP54-206ENST00000555317 SPATA25Q9BR10 227 aa9.06□□□□□ -0.96
SRP54-206ENST00000555317 PBDC1Q9BVG4 233 aa9.06□□□□□ -0.96
SRP54-206ENST00000555317 VSIRQ9H7M9 311 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 266.6 ms