RNA–Protein interactions for RNA: ENST00000555259.5

SCFD1-215, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-215ENST00000555259 FNDC4Q9H6D8 234 aaPredicted RBP6.69□□□□□ -1.34
SCFD1-215ENST00000555259 C8orf4Q9NR00 106 aa6.69□□□□□ -1.34
SCFD1-215ENST00000555259 DAPK2Q9UIK4 370 aa6.69□□□□□ -1.34
SCFD1-215ENST00000555259 LYRM9A8MSI8 78 aa6.68□□□□□ -1.34
SCFD1-215ENST00000555259 KRTAP10-1P60331 282 aa6.68□□□□□ -1.34
SCFD1-215ENST00000555259 ICAM4Q14773 271 aa6.68□□□□□ -1.34
SCFD1-215ENST00000555259 MLANAQ16655 118 aa6.68□□□□□ -1.34
SCFD1-215ENST00000555259 SIGLEC15Q6ZMC9 328 aa6.68□□□□□ -1.34
SCFD1-215ENST00000555259 FOXI2Q6ZQN5 318 aa6.68□□□□□ -1.34
SCFD1-215ENST00000555259 Q6ZRN7 208 aaPredicted RBP6.68□□□□□ -1.34
SCFD1-215ENST00000555259 H2BFWTQ7Z2G1 175 aa6.68□□□□□ -1.34
SCFD1-215ENST00000555259 OR5AP2Q8NGF4 316 aa6.68□□□□□ -1.34
SCFD1-215ENST00000555259 SEC22AQ96IW7 307 aa6.68□□□□□ -1.34
SCFD1-215ENST00000555259 MGLLQ99685 303 aa6.68□□□□□ -1.34
SCFD1-215ENST00000555259 MAGT1Q9H0U3 335 aa6.68□□□□□ -1.34
SCFD1-215ENST00000555259 BUB3O43684 328 aa6.67□□□□□ -1.34
SCFD1-215ENST00000555259 OPRK1P41145 380 aa6.67□□□□□ -1.34
SCFD1-215ENST00000555259 LINC00315P59091 139 aa6.67□□□□□ -1.34
SCFD1-215ENST00000555259 PSG9Q00887 426 aa6.67□□□□□ -1.34
SCFD1-215ENST00000555259 ZNF79Q15937 498 aa6.67□□□□□ -1.34
SCFD1-215ENST00000555259 SERTAD4-AS1Q5TG53 156 aa6.67□□□□□ -1.34
SCFD1-215ENST00000555259 CMTM1Q8IZ96 169 aa6.67□□□□□ -1.34
SCFD1-215ENST00000555259 ZNF503Q96F45 646 aa6.67□□□□□ -1.34
SCFD1-215ENST00000555259 LINC00052Q96N35 136 aa6.67□□□□□ -1.34
SCFD1-215ENST00000555259 UPK3BQ9BT76 320 aa6.67□□□□□ -1.34
SCFD1-215ENST00000555259 SCPEP1Q9HB40 452 aa6.67□□□□□ -1.34
SCFD1-215ENST00000555259 ZNF586Q9NXT0 402 aa6.67□□□□□ -1.34
SCFD1-215ENST00000555259 SCN3BQ9NY72 215 aa6.67□□□□□ -1.34
SCFD1-215ENST00000555259 TRAV30A0A087WSZ9 112 aa6.66□□□□□ -1.34
SCFD1-215ENST00000555259 INS-IGF2F8WCM5 200 aa6.66□□□□□ -1.34
SCFD1-215ENST00000555259 IGKV1-39P01597 117 aa6.66□□□□□ -1.34
SCFD1-215ENST00000555259 IGKV1D-39P04432 117 aa6.66□□□□□ -1.34
SCFD1-215ENST00000555259 PRM2P04554 102 aa6.66□□□□□ -1.34
SCFD1-215ENST00000555259 ATP5G1P05496 136 aa6.66□□□□□ -1.34
SCFD1-215ENST00000555259 RNASE2P10153 161 aaKnown RBP6.66□□□□□ -1.34
SCFD1-215ENST00000555259 ATP5G3P48201 142 aa6.66□□□□□ -1.34
SCFD1-215ENST00000555259 RORCP51449 518 aa6.66□□□□□ -1.34
SCFD1-215ENST00000555259 DHRS11Q6UWP2 260 aa6.66□□□□□ -1.34
SCFD1-215ENST00000555259 Q8WTZ3 238 aa6.66□□□□□ -1.34
SCFD1-215ENST00000555259 UHRF2Q96PU4 802 aa6.66□□□□□ -1.34
SCFD1-215ENST00000555259 ZNF2Q9BSG1 426 aaPredicted RBP6.66□□□□□ -1.34
SCFD1-215ENST00000555259 TMEM208Q9BTX3 173 aa6.66□□□□□ -1.34
SCFD1-215ENST00000555259 WDR12Q9GZL7 423 aaKnown RBP6.66□□□□□ -1.34
SCFD1-215ENST00000555259 RHBDL2Q9NX52 303 aa6.66□□□□□ -1.34
SCFD1-215ENST00000555259 EHFQ9NZC4 300 aa6.66□□□□□ -1.34
SCFD1-215ENST00000555259 LRP1Q07954 4544 aaKnown RBP6.66□□□□□ -1.34
SCFD1-215ENST00000555259 TRAV18A0A075B6X5 111 aa6.65□□□□□ -1.34
SCFD1-215ENST00000555259 NOTOA8MTQ0 251 aa6.65□□□□□ -1.34
SCFD1-215ENST00000555259 M0QYG6 137 aa6.65□□□□□ -1.34
SCFD1-215ENST00000555259 GPR31O00270 319 aa6.65□□□□□ -1.34
SCFD1-215ENST00000555259 EREGO14944 169 aa6.65□□□□□ -1.34
SCFD1-215ENST00000555259 IFNA5P01569 189 aa6.65□□□□□ -1.34
SCFD1-215ENST00000555259 IGLC1P0CG04 106 aa6.65□□□□□ -1.34
SCFD1-215ENST00000555259 RPL5P46777 297 aaKnown RBP6.65□□□□□ -1.34
SCFD1-215ENST00000555259 SUB1P53999 127 aaKnown RBP eCLIP6.65□□□□□ -1.34
SCFD1-215ENST00000555259 DHODHQ02127 395 aa6.65□□□□□ -1.34
SCFD1-215ENST00000555259 FCN2Q15485 313 aa6.65□□□□□ -1.34
SCFD1-215ENST00000555259 IZUMO4Q1ZYL8 232 aa6.65□□□□□ -1.34
SCFD1-215ENST00000555259 FAM78BQ5VT40 261 aa6.65□□□□□ -1.34
SCFD1-215ENST00000555259 SLC35G3Q8N808 338 aa6.65□□□□□ -1.34
SCFD1-215ENST00000555259 SYT8Q8NBV8 401 aa6.65□□□□□ -1.34
SCFD1-215ENST00000555259 OR4C16Q8NGL9 310 aa6.65□□□□□ -1.34
SCFD1-215ENST00000555259 MRGPRFQ96AM1 343 aa6.65□□□□□ -1.34
SCFD1-215ENST00000555259 DUSP21Q9H596 190 aa6.65□□□□□ -1.34
SCFD1-215ENST00000555259 FAM212BQ9NTI7 297 aaPredicted RBP6.65□□□□□ -1.34
SCFD1-215ENST00000555259 CBY3A6NI87 242 aa6.65□□□□□ -1.35
SCFD1-215ENST00000555259 ZNF705GA8MUZ8 300 aaPredicted RBP6.65□□□□□ -1.35
SCFD1-215ENST00000555259 KRTAP29-1A8MX34 341 aaPredicted RBP6.65□□□□□ -1.35
SCFD1-215ENST00000555259 F6UB75 175 aa6.65□□□□□ -1.35
SCFD1-215ENST00000555259 RGS10O43665 173 aa6.65□□□□□ -1.35
SCFD1-215ENST00000555259 GSTZ1O43708 216 aaPredicted RBP6.65□□□□□ -1.35
SCFD1-215ENST00000555259 IL4P05112 153 aa6.65□□□□□ -1.35
SCFD1-215ENST00000555259 RFX2P48378 723 aa6.65□□□□□ -1.35
SCFD1-215ENST00000555259 PAX9P55771 341 aa6.65□□□□□ -1.35
SCFD1-215ENST00000555259 ERVFC1-1P60608 527 aa6.65□□□□□ -1.35
SCFD1-215ENST00000555259 HAMPP81172 84 aa6.65□□□□□ -1.35
SCFD1-215ENST00000555259 PHLDA2Q53GA4 152 aa6.65□□□□□ -1.35
SCFD1-215ENST00000555259 TMEM69Q5SWH9 247 aa6.65□□□□□ -1.35
SCFD1-215ENST00000555259 SPATA31B1PQ5VZV4 182 aa6.65□□□□□ -1.35
SCFD1-215ENST00000555259 C22orf42Q6IC83 251 aa6.65□□□□□ -1.35
SCFD1-215ENST00000555259 OR1S2Q8NGQ3 325 aa6.65□□□□□ -1.35
SCFD1-215ENST00000555259 COQ8AQ8NI60 647 aa6.65□□□□□ -1.35
SCFD1-215ENST00000555259 IGF2BP2-AS1Q96M15 143 aa6.65□□□□□ -1.35
SCFD1-215ENST00000555259 FXYD6Q9H0Q3 95 aa6.65□□□□□ -1.35
SCFD1-215ENST00000555259 TRDV1A0A1B0GX56 115 aa6.64□□□□□ -1.35
SCFD1-215ENST00000555259 PLAC8L1A1L4L8 177 aa6.64□□□□□ -1.35
SCFD1-215ENST00000555259 MEIS3P1A6NDR6 274 aa6.64□□□□□ -1.35
SCFD1-215ENST00000555259 SOCS3O14543 225 aa6.64□□□□□ -1.35
SCFD1-215ENST00000555259 ID1P41134 155 aa6.64□□□□□ -1.35
SCFD1-215ENST00000555259 PSMB3P49720 205 aa6.64□□□□□ -1.35
SCFD1-215ENST00000555259 YPEL3P61236 119 aaPredicted RBP6.64□□□□□ -1.35
SCFD1-215ENST00000555259 ESRGQ1W209 222 aa6.64□□□□□ -1.35
SCFD1-215ENST00000555259 EBLN2Q6P2I7 272 aa6.64□□□□□ -1.35
SCFD1-215ENST00000555259 OR6F1Q8NGZ6 308 aa6.64□□□□□ -1.35
SCFD1-215ENST00000555259 AUNIPQ9H7T9 357 aa6.64□□□□□ -1.35
SCFD1-215ENST00000555259 NDUFB11Q9NX14 153 aa6.64□□□□□ -1.35
SCFD1-215ENST00000555259 KLK11Q9UBX7 282 aa6.64□□□□□ -1.35
SCFD1-215ENST00000555259 TPRKBQ9Y3C4 175 aa6.64□□□□□ -1.35
SCFD1-215ENST00000555259 A0A0J9YX75 114 aa6.63□□□□□ -1.35
SCFD1-215ENST00000555259 TSPOP30536 169 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms