RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 TRBV12-3P01733 135 aa8.34□□□□□ -1.07
TDP1-211ENST00000555178 KLK9Q2XQG4 91 aa8.34□□□□□ -1.07
TDP1-211ENST00000555178 BPIFCQ8NFQ6 507 aa8.34□□□□□ -1.07
TDP1-211ENST00000555178 OR5AU1Q8NGC0 362 aa8.34□□□□□ -1.07
TDP1-211ENST00000555178 OR4X1Q8NH49 305 aa8.34□□□□□ -1.07
TDP1-211ENST00000555178 ZNF414Q96IQ9 312 aa8.34□□□□□ -1.07
TDP1-211ENST00000555178 PARD6GQ9BYG4 376 aaPredicted RBP8.34□□□□□ -1.07
TDP1-211ENST00000555178 C21orf62Q9NYP8 219 aa8.34□□□□□ -1.07
TDP1-211ENST00000555178 ZNF580Q9UK33 172 aa8.34□□□□□ -1.07
TDP1-211ENST00000555178 KLK9Q9UKQ9 250 aa8.34□□□□□ -1.07
TDP1-211ENST00000555178 IGHV3-35A0A0C4DH35 117 aa8.33□□□□□ -1.08
TDP1-211ENST00000555178 FNDC10F2Z333 226 aa8.33□□□□□ -1.08
TDP1-211ENST00000555178 IGKV1-17P01599 117 aa8.33□□□□□ -1.08
TDP1-211ENST00000555178 IGLC1P0CG04 106 aa8.33□□□□□ -1.08
TDP1-211ENST00000555178 GPR183P32249 361 aa8.33□□□□□ -1.08
TDP1-211ENST00000555178 RAB9AP51151 201 aa8.33□□□□□ -1.08
TDP1-211ENST00000555178 RPL15P61313 204 aaKnown RBP8.33□□□□□ -1.08
TDP1-211ENST00000555178 TIGITQ495A1 244 aa8.33□□□□□ -1.08
TDP1-211ENST00000555178 Q56UQ5 140 aa8.33□□□□□ -1.08
TDP1-211ENST00000555178 ETFRF1Q6IPR1 90 aa8.33□□□□□ -1.08
TDP1-211ENST00000555178 THAP8Q8NA92 274 aa8.33□□□□□ -1.08
TDP1-211ENST00000555178 ZNF502Q8TBZ5 544 aa8.33□□□□□ -1.08
TDP1-211ENST00000555178 GNB4Q9HAV0 340 aa8.33□□□□□ -1.08
TDP1-211ENST00000555178 THYN1Q9P016 225 aa8.33□□□□□ -1.08
TDP1-211ENST00000555178 CLPSL1A2RUU4 121 aa8.33□□□□□ -1.08
TDP1-211ENST00000555178 PPP5D1E7EU14 171 aa8.33□□□□□ -1.08
TDP1-211ENST00000555178 RGS13O14921 159 aa8.33□□□□□ -1.08
TDP1-211ENST00000555178 CLN5O75503 358 aa8.33□□□□□ -1.08
TDP1-211ENST00000555178 YIF1AO95070 293 aa8.33□□□□□ -1.08
TDP1-211ENST00000555178 HIST1H1BP16401 226 aaKnown RBP8.33□□□□□ -1.08
TDP1-211ENST00000555178 RAB2AP61019 212 aa8.33□□□□□ -1.08
TDP1-211ENST00000555178 CLEC19AQ6UXS0 136 aa8.33□□□□□ -1.08
TDP1-211ENST00000555178 STPG3Q8N7X2 389 aa8.33□□□□□ -1.08
TDP1-211ENST00000555178 CHRDL1Q9BU40 450 aa8.33□□□□□ -1.08
TDP1-211ENST00000555178 UBQLN2Q9UHD9 624 aa8.33□□□□□ -1.08
TDP1-211ENST00000555178 PXMP4Q9Y6I8 212 aa8.33□□□□□ -1.08
TDP1-211ENST00000555178 TEX46H3BTG2 121 aa8.32□□□□□ -1.08
TDP1-211ENST00000555178 CYB5BO43169 146 aa8.32□□□□□ -1.08
TDP1-211ENST00000555178 IFNA7P01567 189 aa8.32□□□□□ -1.08
TDP1-211ENST00000555178 SEC11BP0C7V7 166 aa8.32□□□□□ -1.08
TDP1-211ENST00000555178 ADMP35318 185 aa8.32□□□□□ -1.08
TDP1-211ENST00000555178 EIF5AP63241 154 aaKnown RBP8.32□□□□□ -1.08
TDP1-211ENST00000555178 FFAR4Q5NUL3 377 aa8.32□□□□□ -1.08
TDP1-211ENST00000555178 CYP2G1PQ6ZSU1 146 aa8.32□□□□□ -1.08
TDP1-211ENST00000555178 SSX7Q7RTT5 188 aa8.32□□□□□ -1.08
TDP1-211ENST00000555178 GNPNAT1Q96EK6 184 aaPredicted RBP8.32□□□□□ -1.08
TDP1-211ENST00000555178 PHYHIPLQ96FC7 376 aa8.32□□□□□ -1.08
TDP1-211ENST00000555178 SLC45A2Q9UMX9 530 aa8.32□□□□□ -1.08
TDP1-211ENST00000555178 IGHV3OR16-8A0A075B7F1 116 aa8.31□□□□□ -1.08
TDP1-211ENST00000555178 TCRBV4S1A1TA0A5B7 111 aa8.31□□□□□ -1.08
TDP1-211ENST00000555178 FAM223BA6NKX1 122 aa8.31□□□□□ -1.08
TDP1-211ENST00000555178 GNG7O60262 68 aa8.31□□□□□ -1.08
TDP1-211ENST00000555178 CLEC3BP05452 202 aa8.31□□□□□ -1.08
TDP1-211ENST00000555178 LINC00869P0C866 280 aa8.31□□□□□ -1.08
TDP1-211ENST00000555178 MFAP4P55083 255 aa8.31□□□□□ -1.08
TDP1-211ENST00000555178 B2MP61769 119 aa8.31□□□□□ -1.08
TDP1-211ENST00000555178 PRR20EP86478 221 aa8.31□□□□□ -1.08
TDP1-211ENST00000555178 PRR20CP86479 221 aa8.31□□□□□ -1.08
TDP1-211ENST00000555178 PRR20DP86480 221 aa8.31□□□□□ -1.08
TDP1-211ENST00000555178 PRR20BP86481 221 aa8.31□□□□□ -1.08
TDP1-211ENST00000555178 PRR20AP86496 221 aa8.31□□□□□ -1.08
TDP1-211ENST00000555178 ATP5G2Q06055 141 aa8.31□□□□□ -1.08
TDP1-211ENST00000555178 DEFB136Q30KP8 78 aa8.31□□□□□ -1.08
TDP1-211ENST00000555178 FAM223AQ8IWN6 122 aa8.31□□□□□ -1.08
TDP1-211ENST00000555178 ZNF709Q8N972 641 aa8.31□□□□□ -1.08
TDP1-211ENST00000555178 OR4F5Q8NH21 305 aa8.31□□□□□ -1.08
TDP1-211ENST00000555178 VN1R17PQ8TDU5 208 aa8.31□□□□□ -1.08
TDP1-211ENST00000555178 DUX3Q96PT4 197 aa8.31□□□□□ -1.08
TDP1-211ENST00000555178 PSMG3Q9BT73 122 aaPredicted RBP8.31□□□□□ -1.08
TDP1-211ENST00000555178 DOK5Q9P104 306 aa8.31□□□□□ -1.08
TDP1-211ENST00000555178 PKD1L1Q8TDX9 2849 aa8.31□□□□□ -1.08
TDP1-211ENST00000555178 A0A1W2PRX2 142 aa8.31□□□□□ -1.08
TDP1-211ENST00000555178 ANKRD34BA5PLL1 514 aa8.31□□□□□ -1.08
TDP1-211ENST00000555178 H3BUA1 57 aa8.31□□□□□ -1.08
TDP1-211ENST00000555178 MPDU1O75352 247 aa8.31□□□□□ -1.08
TDP1-211ENST00000555178 CTSGP08311 255 aa8.31□□□□□ -1.08
TDP1-211ENST00000555178 AWAT1Q58HT5 328 aa8.31□□□□□ -1.08
TDP1-211ENST00000555178 TEX38Q6PEX7 206 aa8.31□□□□□ -1.08
TDP1-211ENST00000555178 ZNF491Q8N8L2 437 aa8.31□□□□□ -1.08
TDP1-211ENST00000555178 MYOZ3Q8TDC0 251 aa8.31□□□□□ -1.08
TDP1-211ENST00000555178 EEF1AKMT3Q96AZ1 226 aa8.31□□□□□ -1.08
TDP1-211ENST00000555178 CITED2Q99967 270 aaPredicted RBP8.31□□□□□ -1.08
TDP1-211ENST00000555178 C19orf24Q9BVV8 132 aa8.31□□□□□ -1.08
TDP1-211ENST00000555178 RPRMQ9NS64 109 aa8.31□□□□□ -1.08
TDP1-211ENST00000555178 A0A1B0GV50 99 aa8.3□□□□□ -1.08
TDP1-211ENST00000555178 ADARB2-AS1A8MUL3 147 aa8.3□□□□□ -1.08
TDP1-211ENST00000555178 HMGB3O15347 200 aaKnown RBP8.3□□□□□ -1.08
TDP1-211ENST00000555178 PSG1P11464 419 aa8.3□□□□□ -1.08
TDP1-211ENST00000555178 NPBWR1P48145 328 aa8.3□□□□□ -1.08
TDP1-211ENST00000555178 SULT1A2P50226 295 aa8.3□□□□□ -1.08
TDP1-211ENST00000555178 SLC35B1P78383 322 aa8.3□□□□□ -1.08
TDP1-211ENST00000555178 ZNF726P1Q15940 193 aa8.3□□□□□ -1.08
TDP1-211ENST00000555178 ZNF767PQ75MW2 155 aa8.3□□□□□ -1.08
TDP1-211ENST00000555178 CXorf58Q96LI9 332 aa8.3□□□□□ -1.08
TDP1-211ENST00000555178 SLC39A9Q9NUM3 307 aa8.3□□□□□ -1.08
TDP1-211ENST00000555178 TIMM9Q9Y5J7 89 aa8.3□□□□□ -1.08
TDP1-211ENST00000555178 TMEM89A2RUT3 159 aa8.3□□□□□ -1.08
TDP1-211ENST00000555178 C17orf112F2Z3M2 114 aa8.3□□□□□ -1.08
TDP1-211ENST00000555178 BRI3O95415 125 aa8.3□□□□□ -1.08
TDP1-211ENST00000555178 NMBP08949 121 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms