RNA–Protein interactions for RNA: ENST00000554995.1

PSEN1-211, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 592 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-211ENST00000554995 SSC5DA1L4H1 1573 aa2.61□□□□□ -1.99
PSEN1-211ENST00000554995 LCTP09848 1927 aa2.6□□□□□ -1.99
PSEN1-211ENST00000554995 LRRC37A2A6NM11 1700 aa2.6□□□□□ -1.99
PSEN1-211ENST00000554995 FASNP49327 2511 aaKnown RBP2.6□□□□□ -1.99
PSEN1-211ENST00000554995 C3orf84H3BNL1 204 aa2.6□□□□□ -1.99
PSEN1-211ENST00000554995 HAND1O96004 215 aa2.6□□□□□ -1.99
PSEN1-211ENST00000554995 TTRP02766 147 aa2.6□□□□□ -1.99
PSEN1-211ENST00000554995 ZNF705DP0CH99 300 aaPredicted RBP2.6□□□□□ -1.99
PSEN1-211ENST00000554995 CBR1P16152 277 aa2.6□□□□□ -1.99
PSEN1-211ENST00000554995 RPL5P46777 297 aaKnown RBP2.6□□□□□ -1.99
PSEN1-211ENST00000554995 SNRPD2P62316 118 aaKnown RBP2.6□□□□□ -1.99
PSEN1-211ENST00000554995 GRK1Q15835 563 aa2.6□□□□□ -1.99
PSEN1-211ENST00000554995 TMEM97Q5BJF2 176 aa2.6□□□□□ -1.99
PSEN1-211ENST00000554995 MAST4O15021 2626 aa2.6□□□□□ -1.99
PSEN1-211ENST00000554995 FLNBO75369 2602 aaKnown RBP2.59□□□□□ -1.99
PSEN1-211ENST00000554995 DCHS1Q96JQ0 3298 aa2.59□□□□□ -1.99
PSEN1-211ENST00000554995 NLRC5Q86WI3 1866 aa2.59□□□□□ -1.99
PSEN1-211ENST00000554995 A0A0J9YY10 115 aa2.59□□□□□ -1.99
PSEN1-211ENST00000554995 A0A1B0GX78 115 aa2.59□□□□□ -1.99
PSEN1-211ENST00000554995 FAAHO00519 579 aa2.59□□□□□ -1.99
PSEN1-211ENST00000554995 KLRC4O43908 158 aa2.59□□□□□ -1.99
PSEN1-211ENST00000554995 CNIH1O95406 144 aa2.59□□□□□ -1.99
PSEN1-211ENST00000554995 HLA-DRB1P01911 266 aa2.59□□□□□ -1.99
PSEN1-211ENST00000554995 BPGMP07738 259 aa2.59□□□□□ -1.99
PSEN1-211ENST00000554995 RUNX1Q01196 453 aa2.59□□□□□ -1.99
PSEN1-211ENST00000554995 KCNJ8Q15842 424 aa2.59□□□□□ -1.99
PSEN1-211ENST00000554995 MIAQ16674 131 aa2.59□□□□□ -1.99
PSEN1-211ENST00000554995 SLC35F6Q8N357 371 aa2.59□□□□□ -1.99
PSEN1-211ENST00000554995 CISHQ9NSE2 258 aa2.59□□□□□ -1.99
PSEN1-211ENST00000554995 RBM7Q9Y580 266 aaKnown RBP2.59□□□□□ -1.99
PSEN1-211ENST00000554995 PLXNA1Q9UIW2 1896 aa2.58□□□□□ -2
PSEN1-211ENST00000554995 COL4A5P29400 1685 aa2.58□□□□□ -2
PSEN1-211ENST00000554995 TRBV20OR9-2A0A075B6H5 130 aa2.58□□□□□ -2
PSEN1-211ENST00000554995 TRGV5A0A0B4J1U4 118 aa2.58□□□□□ -2
PSEN1-211ENST00000554995 MUC21A0A0G2JKD1 596 aa2.58□□□□□ -2
PSEN1-211ENST00000554995 MUC21A0A140T8X8 626 aa2.58□□□□□ -2
PSEN1-211ENST00000554995 FAM236DA0A1B0GTK5 79 aa2.58□□□□□ -2
PSEN1-211ENST00000554995 OR4C46A6NHA9 309 aa2.58□□□□□ -2
PSEN1-211ENST00000554995 UCHL1P09936 223 aa2.58□□□□□ -2
PSEN1-211ENST00000554995 FAM236CP0DP71 79 aa2.58□□□□□ -2
PSEN1-211ENST00000554995 CCL5P13501 91 aa2.58□□□□□ -2
PSEN1-211ENST00000554995 S100A7P31151 101 aa2.58□□□□□ -2
PSEN1-211ENST00000554995 CA5AP35218 305 aa2.58□□□□□ -2
PSEN1-211ENST00000554995 CCR2P41597 374 aa2.58□□□□□ -2
PSEN1-211ENST00000554995 CSN1S1P47710 185 aa2.58□□□□□ -2
PSEN1-211ENST00000554995 KRTAP10-1P60331 282 aa2.58□□□□□ -2
PSEN1-211ENST00000554995 AP1S1P61966 158 aa2.58□□□□□ -2
PSEN1-211ENST00000554995 SNRPFP62306 86 aaKnown RBP2.58□□□□□ -2
PSEN1-211ENST00000554995 AKR1C1Q04828 323 aa2.58□□□□□ -2
PSEN1-211ENST00000554995 CDK10Q15131 360 aa2.58□□□□□ -2
PSEN1-211ENST00000554995 TMED2Q15363 201 aa2.58□□□□□ -2
PSEN1-211ENST00000554995 WHAMMP3Q1A5X7 153 aa2.58□□□□□ -2
PSEN1-211ENST00000554995 PP632Q6XCG6 107 aa2.58□□□□□ -2
PSEN1-211ENST00000554995 Q6ZS49 121 aa2.58□□□□□ -2
PSEN1-211ENST00000554995 LHFPL1Q86WI0 220 aa2.58□□□□□ -2
PSEN1-211ENST00000554995 OR6V1Q8N148 313 aa2.58□□□□□ -2
PSEN1-211ENST00000554995 ANKRD29Q8N6D5 301 aa2.58□□□□□ -2
PSEN1-211ENST00000554995 ZNF283Q8N7M2 679 aa2.58□□□□□ -2
PSEN1-211ENST00000554995 OR4X1Q8NH49 305 aa2.58□□□□□ -2
PSEN1-211ENST00000554995 TRIM4Q9C037 500 aa2.58□□□□□ -2
PSEN1-211ENST00000554995 WDR61Q9GZS3 305 aaKnown RBP2.58□□□□□ -2
PSEN1-211ENST00000554995 XAGE1AQ9HD64 81 aa2.58□□□□□ -2
PSEN1-211ENST00000554995 ASH1LQ9NR48 2969 aaKnown RBP2.58□□□□□ -2
PSEN1-211ENST00000554995 PRTFDC1Q9NRG1 225 aa2.58□□□□□ -2
PSEN1-211ENST00000554995 DOK5Q9P104 306 aa2.58□□□□□ -2
PSEN1-211ENST00000554995 RSL24D1Q9UHA3 163 aaKnown RBP2.58□□□□□ -2
PSEN1-211ENST00000554995 ARL2BPQ9Y2Y0 163 aa2.58□□□□□ -2
PSEN1-211ENST00000554995 ZFHX2Q9C0A1 2572 aaPredicted RBP2.58□□□□□ -2
PSEN1-211ENST00000554995 BPTFQ12830 3046 aa2.58□□□□□ -2
PSEN1-211ENST00000554995 ANK1P16157 1881 aa2.58□□□□□ -2
PSEN1-211ENST00000554995 ALPK3Q96L96 1907 aa2.58□□□□□ -2
PSEN1-211ENST00000554995 CITO14578 2027 aa2.58□□□□□ -2
PSEN1-211ENST00000554995 PDCD11Q14690 1871 aaKnown RBP2.57□□□□□ -2
PSEN1-211ENST00000554995 RALGAPA2Q2PPJ7 1873 aa2.57□□□□□ -2
PSEN1-211ENST00000554995 SERPINA1P01009 418 aa2.57□□□□□ -2
PSEN1-211ENST00000554995 TFPTP0C1Z6 253 aa2.57□□□□□ -2
PSEN1-211ENST00000554995 FUSP35637 526 aaKnown RBP eCLIP2.57□□□□□ -2
PSEN1-211ENST00000554995 DEFA1P59665 94 aa2.57□□□□□ -2
PSEN1-211ENST00000554995 RPS20P60866 119 aaKnown RBP2.57□□□□□ -2
PSEN1-211ENST00000554995 GNG11P61952 73 aa2.57□□□□□ -2
PSEN1-211ENST00000554995 OR8B12Q8NGG6 310 aa2.57□□□□□ -2
PSEN1-211ENST00000554995 BORCS7Q96B45 105 aa2.57□□□□□ -2
PSEN1-211ENST00000554995 EFCAB1Q9HAE3 211 aa2.57□□□□□ -2
PSEN1-211ENST00000554995 MCM3APO60318 1980 aa2.57□□□□□ -2
PSEN1-211ENST00000554995 CDH23Q9H251 3354 aa2.57□□□□□ -2
PSEN1-211ENST00000554995 PTPRZ1P23471 2315 aaPredicted RBP2.57□□□□□ -2
PSEN1-211ENST00000554995 TPRP12270 2363 aaKnown RBP2.57□□□□□ -2
PSEN1-211ENST00000554995 PLXNB2O15031 1838 aa2.56□□□□□ -2
PSEN1-211ENST00000554995 ZNF236Q9UL36 1845 aa2.56□□□□□ -2
PSEN1-211ENST00000554995 C2orf74A8MZ97 194 aa2.56□□□□□ -2
PSEN1-211ENST00000554995 LEPROTO15243 131 aa2.56□□□□□ -2
PSEN1-211ENST00000554995 HIST1H3AP68431 136 aa2.56□□□□□ -2
PSEN1-211ENST00000554995 H3F3AP84243 136 aa2.56□□□□□ -2
PSEN1-211ENST00000554995 AGTRAPQ6RW13 159 aa2.56□□□□□ -2
PSEN1-211ENST00000554995 Q6ZS52 159 aa2.56□□□□□ -2
PSEN1-211ENST00000554995 ZNF767PQ75MW2 155 aa2.56□□□□□ -2
PSEN1-211ENST00000554995 S100A7AQ86SG5 101 aa2.56□□□□□ -2
PSEN1-211ENST00000554995 MRPL30Q8TCC3 161 aaKnown RBP2.56□□□□□ -2
PSEN1-211ENST00000554995 SIGMAR1Q99720 223 aa2.56□□□□□ -2
PSEN1-211ENST00000554995 CMSS1Q9BQ75 279 aaKnown RBP2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms