RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 SPP1P10451 314 aa11.17□□□□□ -0.62
SHOX2-206ENST00000554685 SERF2P84101 59 aa11.17□□□□□ -0.62
SHOX2-206ENST00000554685 SPSB3Q6PJ21 355 aa11.17□□□□□ -0.62
SHOX2-206ENST00000554685 MYOZ3Q8TDC0 251 aa11.17□□□□□ -0.62
SHOX2-206ENST00000554685 WFDC12Q8WWY7 111 aa11.17□□□□□ -0.62
SHOX2-206ENST00000554685 MGST2Q99735 147 aa11.17□□□□□ -0.62
SHOX2-206ENST00000554685 GGTLC1Q9BX51 225 aa11.17□□□□□ -0.62
SHOX2-206ENST00000554685 KLK15Q9H2R5 256 aa11.17□□□□□ -0.62
SHOX2-206ENST00000554685 MRPL36Q9P0J6 103 aaKnown RBP11.17□□□□□ -0.62
SHOX2-206ENST00000554685 CFDP00746 253 aaPredicted RBP11.16□□□□□ -0.62
SHOX2-206ENST00000554685 IGLC1P0CG04 106 aa11.16□□□□□ -0.62
SHOX2-206ENST00000554685 RPL29P47914 159 aaKnown RBP11.16□□□□□ -0.62
SHOX2-206ENST00000554685 RUNX1Q01196 453 aa11.16□□□□□ -0.62
SHOX2-206ENST00000554685 DEFA5Q01523 94 aa11.16□□□□□ -0.62
SHOX2-206ENST00000554685 FOXL1Q12952 345 aa11.16□□□□□ -0.62
SHOX2-206ENST00000554685 CYP2G1PQ6ZSU1 146 aa11.16□□□□□ -0.62
SHOX2-206ENST00000554685 OR2G3Q8NGZ4 309 aa11.16□□□□□ -0.62
SHOX2-206ENST00000554685 UBE2E2Q96LR5 201 aa11.16□□□□□ -0.62
SHOX2-206ENST00000554685 SLC25A32Q9H2D1 315 aa11.16□□□□□ -0.62
SHOX2-206ENST00000554685 MAST4O15021 2626 aa11.16□□□□□ -0.62
SHOX2-206ENST00000554685 IGKV1OR2-108A0A075B7D4 117 aa11.15□□□□□ -0.62
SHOX2-206ENST00000554685 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.15□□□□□ -0.62
SHOX2-206ENST00000554685 UMAD1C9J7I0 102 aa11.15□□□□□ -0.62
SHOX2-206ENST00000554685 TSPAN15O95858 294 aa11.15□□□□□ -0.62
SHOX2-206ENST00000554685 MBP02144 154 aa11.15□□□□□ -0.62
SHOX2-206ENST00000554685 YPEL3P61236 119 aaPredicted RBP11.15□□□□□ -0.62
SHOX2-206ENST00000554685 RELQ04864 619 aaPredicted RBP11.15□□□□□ -0.62
SHOX2-206ENST00000554685 ZNF343Q6P1L6 599 aa11.15□□□□□ -0.62
SHOX2-206ENST00000554685 TEX261Q6UWH6 196 aa11.15□□□□□ -0.62
SHOX2-206ENST00000554685 C10orf99Q6UWK7 81 aa11.15□□□□□ -0.62
SHOX2-206ENST00000554685 ZNF491Q8N8L2 437 aa11.15□□□□□ -0.62
SHOX2-206ENST00000554685 BPIFCQ8NFQ6 507 aa11.15□□□□□ -0.62
SHOX2-206ENST00000554685 WIPF2Q8TF74 440 aaPredicted RBP11.15□□□□□ -0.62
SHOX2-206ENST00000554685 CCDC140Q96MF4 163 aa11.15□□□□□ -0.62
SHOX2-206ENST00000554685 RSG1Q9BU20 258 aa11.15□□□□□ -0.62
SHOX2-206ENST00000554685 SLC45A2Q9UMX9 530 aa11.15□□□□□ -0.62
SHOX2-206ENST00000554685 S4R3C0 116 aa11.15□□□□□ -0.62
SHOX2-206ENST00000554685 IGKV1D-37A0A075B6S9 117 aa11.14□□□□□ -0.63
SHOX2-206ENST00000554685 OR2T8A6NH00 312 aa11.14□□□□□ -0.63
SHOX2-206ENST00000554685 F8W735 103 aaPredicted RBP11.14□□□□□ -0.63
SHOX2-206ENST00000554685 TGOLN2O43493 480 aa11.14□□□□□ -0.63
SHOX2-206ENST00000554685 IGHV3-23P01764 117 aa11.14□□□□□ -0.63
SHOX2-206ENST00000554685 RPLP1P05386 114 aaKnown RBP11.14□□□□□ -0.63
SHOX2-206ENST00000554685 CLEC3BP05452 202 aa11.14□□□□□ -0.63
SHOX2-206ENST00000554685 LGALS1P09382 135 aaKnown RBP11.14□□□□□ -0.63
SHOX2-206ENST00000554685 GPR183P32249 361 aa11.14□□□□□ -0.63
SHOX2-206ENST00000554685 RAB5CP51148 216 aa11.14□□□□□ -0.63
SHOX2-206ENST00000554685 PROK1P58294 105 aa11.14□□□□□ -0.63
SHOX2-206ENST00000554685 B2MP61769 119 aa11.14□□□□□ -0.63
SHOX2-206ENST00000554685 AKR1C8PQ5T2L2 129 aa11.14□□□□□ -0.63
SHOX2-206ENST00000554685 PXDC1Q5TGL8 231 aa11.14□□□□□ -0.63
SHOX2-206ENST00000554685 CLEC19AQ6UXS0 136 aa11.14□□□□□ -0.63
SHOX2-206ENST00000554685 Q6ZRG5 221 aa11.14□□□□□ -0.63
SHOX2-206ENST00000554685 ZNF767PQ75MW2 155 aa11.14□□□□□ -0.63
SHOX2-206ENST00000554685 TMED6Q8WW62 240 aa11.14□□□□□ -0.63
SHOX2-206ENST00000554685 PXMP4Q9Y6I8 212 aa11.14□□□□□ -0.63
SHOX2-206ENST00000554685 TOMM40O96008 361 aa11.13□□□□□ -0.63
SHOX2-206ENST00000554685 IGKV1-17P01599 117 aa11.13□□□□□ -0.63
SHOX2-206ENST00000554685 IGHV3-11P01762 117 aa11.13□□□□□ -0.63
SHOX2-206ENST00000554685 RD3LP0DJH9 198 aa11.13□□□□□ -0.63
SHOX2-206ENST00000554685 ARL3P36405 182 aa11.13□□□□□ -0.63
SHOX2-206ENST00000554685 CDX1P47902 265 aaPredicted RBP11.13□□□□□ -0.63
SHOX2-206ENST00000554685 PRR20EP86478 221 aa11.13□□□□□ -0.63
SHOX2-206ENST00000554685 PRR20CP86479 221 aa11.13□□□□□ -0.63
SHOX2-206ENST00000554685 PRR20DP86480 221 aa11.13□□□□□ -0.63
SHOX2-206ENST00000554685 PRR20BP86481 221 aa11.13□□□□□ -0.63
SHOX2-206ENST00000554685 PRR20AP86496 221 aa11.13□□□□□ -0.63
SHOX2-206ENST00000554685 ZNF616Q08AN1 781 aa11.13□□□□□ -0.63
SHOX2-206ENST00000554685 KIAA0141Q14154 515 aaPredicted RBP11.13□□□□□ -0.63
SHOX2-206ENST00000554685 ACOT6Q3I5F7 207 aaPredicted RBP11.13□□□□□ -0.63
SHOX2-206ENST00000554685 TIGITQ495A1 244 aa11.13□□□□□ -0.63
SHOX2-206ENST00000554685 FFAR4Q5NUL3 377 aa11.13□□□□□ -0.63
SHOX2-206ENST00000554685 ZNF600Q6ZNG1 722 aa11.13□□□□□ -0.63
SHOX2-206ENST00000554685 LCNL1Q6ZST4 164 aa11.13□□□□□ -0.63
SHOX2-206ENST00000554685 S100A7AQ86SG5 101 aa11.13□□□□□ -0.63
SHOX2-206ENST00000554685 STPG3Q8N7X2 389 aa11.13□□□□□ -0.63
SHOX2-206ENST00000554685 ZNF680Q8NEM1 530 aa11.13□□□□□ -0.63
SHOX2-206ENST00000554685 LRRC20Q8TCA0 184 aa11.13□□□□□ -0.63
SHOX2-206ENST00000554685 Q8WTZ3 238 aa11.13□□□□□ -0.63
SHOX2-206ENST00000554685 SH3BGRL3Q9H299 93 aa11.13□□□□□ -0.63
SHOX2-206ENST00000554685 SLC39A9Q9NUM3 307 aa11.13□□□□□ -0.63
SHOX2-206ENST00000554685 PEF1Q9UBV8 284 aaKnown RBP11.13□□□□□ -0.63
SHOX2-206ENST00000554685 UBQLN2Q9UHD9 624 aa11.13□□□□□ -0.63
SHOX2-206ENST00000554685 CTSGP08311 255 aa11.12□□□□□ -0.63
SHOX2-206ENST00000554685 LINC00869P0C866 280 aa11.12□□□□□ -0.63
SHOX2-206ENST00000554685 S100A7P31151 101 aa11.12□□□□□ -0.63
SHOX2-206ENST00000554685 SRSF2Q01130 221 aaKnown RBP11.12□□□□□ -0.63
SHOX2-206ENST00000554685 KHDC1LQ5JSQ8 128 aa11.12□□□□□ -0.63
SHOX2-206ENST00000554685 MIC13Q5XKP0 118 aa11.12□□□□□ -0.63
SHOX2-206ENST00000554685 ALKAL2Q6UX46 152 aa11.12□□□□□ -0.63
SHOX2-206ENST00000554685 DPPA3Q6W0C5 159 aa11.12□□□□□ -0.63
SHOX2-206ENST00000554685 TMEM182Q6ZP80 229 aaPredicted RBP11.12□□□□□ -0.63
SHOX2-206ENST00000554685 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.12□□□□□ -0.63
SHOX2-206ENST00000554685 OR51G1Q8NGK1 321 aa11.12□□□□□ -0.63
SHOX2-206ENST00000554685 OR1L4Q8NGR5 311 aa11.12□□□□□ -0.63
SHOX2-206ENST00000554685 RNF141Q8WVD5 230 aa11.12□□□□□ -0.63
SHOX2-206ENST00000554685 PFDN5Q99471 154 aa11.12□□□□□ -0.63
SHOX2-206ENST00000554685 C19orf24Q9BVV8 132 aa11.12□□□□□ -0.63
SHOX2-206ENST00000554685 GNB4Q9HAV0 340 aa11.12□□□□□ -0.63
SHOX2-206ENST00000554685 GGCTO75223 188 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms