RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 ZNF414Q96IQ9 312 aa7.97□□□□□ -1.13
SHMT2-213ENST00000554600 OR10C1Q96KK4 312 aa7.97□□□□□ -1.13
SHMT2-213ENST00000554600 METTL26Q96S19 204 aa7.97□□□□□ -1.13
SHMT2-213ENST00000554600 FAM110AQ9BQ89 295 aa7.97□□□□□ -1.13
SHMT2-213ENST00000554600 C7orf50Q9BRJ6 194 aaKnown RBP7.97□□□□□ -1.13
SHMT2-213ENST00000554600 TMEM231Q9H6L2 316 aa7.97□□□□□ -1.13
SHMT2-213ENST00000554600 TMED3Q9Y3Q3 217 aa7.97□□□□□ -1.13
SHMT2-213ENST00000554600 U3KQ87 197 aa7.97□□□□□ -1.13
SHMT2-213ENST00000554600 BIRC6Q9NR09 4857 aa7.97□□□□□ -1.13
SHMT2-213ENST00000554600 LOC102724200A0A096LPH7 203 aaPredicted RBP7.96□□□□□ -1.14
SHMT2-213ENST00000554600 C9orf170A2RU37 121 aa7.96□□□□□ -1.14
SHMT2-213ENST00000554600 DNASE2O00115 360 aaPredicted RBP7.96□□□□□ -1.14
SHMT2-213ENST00000554600 MED6O75586 246 aa7.96□□□□□ -1.14
SHMT2-213ENST00000554600 OR10J1P30954 320 aa7.96□□□□□ -1.14
SHMT2-213ENST00000554600 PAFAH1B2P68402 229 aa7.96□□□□□ -1.14
SHMT2-213ENST00000554600 C4orf46Q504U0 113 aa7.96□□□□□ -1.14
SHMT2-213ENST00000554600 GGNBP1Q5YKI7 109 aa7.96□□□□□ -1.14
SHMT2-213ENST00000554600 PRSS54Q6PEW0 395 aa7.96□□□□□ -1.14
SHMT2-213ENST00000554600 WFDC3Q8IUB2 231 aa7.96□□□□□ -1.14
SHMT2-213ENST00000554600 LRTM2Q8N967 370 aa7.96□□□□□ -1.14
SHMT2-213ENST00000554600 OR1S2Q8NGQ3 325 aa7.96□□□□□ -1.14
SHMT2-213ENST00000554600 Q8WTZ3 238 aa7.96□□□□□ -1.14
SHMT2-213ENST00000554600 TMEM170AQ8WVE7 144 aa7.96□□□□□ -1.14
SHMT2-213ENST00000554600 NPIPB3Q92617 1050 aa7.96□□□□□ -1.14
SHMT2-213ENST00000554600 CCDC32Q9BV29 185 aa7.96□□□□□ -1.14
SHMT2-213ENST00000554600 GGTLC1Q9BX51 225 aa7.96□□□□□ -1.14
SHMT2-213ENST00000554600 MAGT1Q9H0U3 335 aa7.96□□□□□ -1.14
SHMT2-213ENST00000554600 ZFAND3Q9H8U3 227 aa7.96□□□□□ -1.14
SHMT2-213ENST00000554600 PTTG2Q9NZH5 202 aa7.96□□□□□ -1.14
SHMT2-213ENST00000554600 A0A1W2PS18 150 aa7.95□□□□□ -1.14
SHMT2-213ENST00000554600 DFFBO76075 338 aa7.95□□□□□ -1.14
SHMT2-213ENST00000554600 IGKV1-17P01599 117 aa7.95□□□□□ -1.14
SHMT2-213ENST00000554600 APOHP02749 345 aaPredicted RBP7.95□□□□□ -1.14
SHMT2-213ENST00000554600 ANXA7P20073 488 aaKnown RBP7.95□□□□□ -1.14
SHMT2-213ENST00000554600 RAB11AP62491 216 aa7.95□□□□□ -1.14
SHMT2-213ENST00000554600 LINC00322Q6ZN03 302 aaPredicted RBP7.95□□□□□ -1.14
SHMT2-213ENST00000554600 COQ8AQ8NI60 647 aa7.95□□□□□ -1.14
SHMT2-213ENST00000554600 MUC7Q8TAX7 377 aa7.95□□□□□ -1.14
SHMT2-213ENST00000554600 SLC35E1Q96K37 410 aa7.95□□□□□ -1.14
SHMT2-213ENST00000554600 CITED4Q96RK1 184 aa7.95□□□□□ -1.14
SHMT2-213ENST00000554600 RABAC1Q9UI14 185 aa7.95□□□□□ -1.14
SHMT2-213ENST00000554600 HUWE1Q7Z6Z7 4374 aaKnown RBP7.94□□□□□ -1.14
SHMT2-213ENST00000554600 FAM90A26D6RGX4 464 aa7.94□□□□□ -1.14
SHMT2-213ENST00000554600 C3orf84H3BNL1 204 aa7.94□□□□□ -1.14
SHMT2-213ENST00000554600 WRBO00258 174 aa7.94□□□□□ -1.14
SHMT2-213ENST00000554600 LYRM1O43325 122 aa7.94□□□□□ -1.14
SHMT2-213ENST00000554600 PITX3O75364 302 aa7.94□□□□□ -1.14
SHMT2-213ENST00000554600 ADAP1O75689 374 aa7.94□□□□□ -1.14
SHMT2-213ENST00000554600 IFNA21P01568 189 aa7.94□□□□□ -1.14
SHMT2-213ENST00000554600 CD5P06127 495 aa7.94□□□□□ -1.14
SHMT2-213ENST00000554600 OR4E1P0C645 316 aa7.94□□□□□ -1.14
SHMT2-213ENST00000554600 IGLC1P0CG04 106 aa7.94□□□□□ -1.14
SHMT2-213ENST00000554600 SLC25A6P12236 298 aa7.94□□□□□ -1.14
SHMT2-213ENST00000554600 RPL35AP18077 110 aaKnown RBP7.94□□□□□ -1.14
SHMT2-213ENST00000554600 ATP5IP56385 69 aaPredicted RBP7.94□□□□□ -1.14
SHMT2-213ENST00000554600 DHRS2Q13268 280 aa7.94□□□□□ -1.14
SHMT2-213ENST00000554600 ODF3L2Q3SX64 289 aa7.94□□□□□ -1.14
SHMT2-213ENST00000554600 LYG2Q86SG7 212 aa7.94□□□□□ -1.14
SHMT2-213ENST00000554600 APRG1Q8IVJ8 170 aa7.94□□□□□ -1.14
SHMT2-213ENST00000554600 STXBP6Q8NFX7 210 aa7.94□□□□□ -1.14
SHMT2-213ENST00000554600 GRAMD2BQ96HH9 432 aa7.94□□□□□ -1.14
SHMT2-213ENST00000554600 CIB3Q96Q77 187 aaPredicted RBP7.94□□□□□ -1.14
SHMT2-213ENST00000554600 VSIRQ9H7M9 311 aa7.94□□□□□ -1.14
SHMT2-213ENST00000554600 EPPK1P58107 5090 aaKnown RBP7.93□□□□□ -1.14
SHMT2-213ENST00000554600 ZFP92A6NM28 416 aa7.93□□□□□ -1.14
SHMT2-213ENST00000554600 PLA2G10O15496 165 aa7.93□□□□□ -1.14
SHMT2-213ENST00000554600 SYNGR2O43760 224 aa7.93□□□□□ -1.14
SHMT2-213ENST00000554600 IL4P05112 153 aa7.93□□□□□ -1.14
SHMT2-213ENST00000554600 RD3LP0DJH9 198 aa7.93□□□□□ -1.14
SHMT2-213ENST00000554600 LYL1P12980 280 aa7.93□□□□□ -1.14
SHMT2-213ENST00000554600 BTCP35070 178 aa7.93□□□□□ -1.14
SHMT2-213ENST00000554600 P2RY1P47900 373 aa7.93□□□□□ -1.14
SHMT2-213ENST00000554600 APOC4P55056 127 aa7.93□□□□□ -1.14
SHMT2-213ENST00000554600 CMC4P56277 68 aaPredicted RBP7.93□□□□□ -1.14
SHMT2-213ENST00000554600 YPEL3P61236 119 aaPredicted RBP7.93□□□□□ -1.14
SHMT2-213ENST00000554600 RPP30P78346 268 aaKnown RBP7.93□□□□□ -1.14
SHMT2-213ENST00000554600 ZNF846Q147U1 533 aa7.93□□□□□ -1.14
SHMT2-213ENST00000554600 LILRB2Q8N423 598 aa7.93□□□□□ -1.14
SHMT2-213ENST00000554600 PBDC1Q9BVG4 233 aa7.93□□□□□ -1.14
SHMT2-213ENST00000554600 WDR12Q9GZL7 423 aaKnown RBP7.93□□□□□ -1.14
SHMT2-213ENST00000554600 MS4A6AQ9H2W1 248 aa7.93□□□□□ -1.14
SHMT2-213ENST00000554600 TRAV6A0A075B6T7 132 aa7.92□□□□□ -1.14
SHMT2-213ENST00000554600 H3BP45 60 aa7.92□□□□□ -1.14
SHMT2-213ENST00000554600 SCGB1D2O95969 90 aa7.92□□□□□ -1.14
SHMT2-213ENST00000554600 HNRNPCP07910 306 aaKnown RBP eCLIP7.92□□□□□ -1.14
SHMT2-213ENST00000554600 CRYBB3P26998 211 aa7.92□□□□□ -1.14
SHMT2-213ENST00000554600 GPX4P36969 197 aaPredicted RBP7.92□□□□□ -1.14
SHMT2-213ENST00000554600 EIF2B2P49770 351 aaKnown RBP7.92□□□□□ -1.14
SHMT2-213ENST00000554600 ZNF124Q15973 351 aa7.92□□□□□ -1.14
SHMT2-213ENST00000554600 SPANXN5Q5MJ07 72 aa7.92□□□□□ -1.14
SHMT2-213ENST00000554600 FAM90A2PQ658T7 463 aa7.92□□□□□ -1.14
SHMT2-213ENST00000554600 ZFAND6Q6FIF0 208 aa7.92□□□□□ -1.14
SHMT2-213ENST00000554600 MZT2BQ6NZ67 158 aa7.92□□□□□ -1.14
SHMT2-213ENST00000554600 STPG3Q8N7X2 389 aa7.92□□□□□ -1.14
SHMT2-213ENST00000554600 C20orf85Q9H1P6 137 aa7.92□□□□□ -1.14
SHMT2-213ENST00000554600 MAP6D1Q9H9H5 199 aa7.92□□□□□ -1.14
SHMT2-213ENST00000554600 MPTX1A8MV57 137 aa7.91□□□□□ -1.14
SHMT2-213ENST00000554600 TOMM40O96008 361 aa7.91□□□□□ -1.14
SHMT2-213ENST00000554600 TCRBP04435 133 aa7.91□□□□□ -1.14
SHMT2-213ENST00000554600 FABP1P07148 127 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms