RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 CIB3Q96Q77 187 aaPredicted RBP12.56□□□□□ -0.4
NEK9-204ENST00000554258 MAGT1Q9H0U3 335 aa12.56□□□□□ -0.4
NEK9-204ENST00000554258 ENY2Q9NPA8 101 aa12.56□□□□□ -0.4
NEK9-204ENST00000554258 HEYLQ9NQ87 328 aaPredicted RBP12.56□□□□□ -0.4
NEK9-204ENST00000554258 U3KQ87 197 aa12.56□□□□□ -0.4
NEK9-204ENST00000554258 LRP1BQ9NZR2 4599 aa12.56□□□□□ -0.4
NEK9-204ENST00000554258 TMEM50AO95807 157 aa12.55□□□□□ -0.4
NEK9-204ENST00000554258 HTR2BP41595 481 aa12.55□□□□□ -0.4
NEK9-204ENST00000554258 PAX9P55771 341 aa12.55□□□□□ -0.4
NEK9-204ENST00000554258 TCTAP57738 103 aa12.55□□□□□ -0.4
NEK9-204ENST00000554258 C2orf83Q53S99 150 aa12.55□□□□□ -0.4
NEK9-204ENST00000554258 TMEM170AQ8WVE7 144 aa12.55□□□□□ -0.4
NEK9-204ENST00000554258 WDR89Q96FK6 387 aaPredicted RBP12.55□□□□□ -0.4
NEK9-204ENST00000554258 USMG5Q96IX5 58 aa12.55□□□□□ -0.4
NEK9-204ENST00000554258 SMIM8Q96KF7 97 aa12.55□□□□□ -0.4
NEK9-204ENST00000554258 MS4A10Q96PG2 267 aa12.55□□□□□ -0.4
NEK9-204ENST00000554258 RCL1Q9Y2P8 373 aaKnown RBP12.55□□□□□ -0.4
NEK9-204ENST00000554258 K7EPK0 472 aa12.54□□□□□ -0.4
NEK9-204ENST00000554258 PRH1P02810 166 aa12.54□□□□□ -0.4
NEK9-204ENST00000554258 SNCAP37840 140 aa12.54□□□□□ -0.4
NEK9-204ENST00000554258 TAS2R30P59541 319 aa12.54□□□□□ -0.4
NEK9-204ENST00000554258 NECAP1Q8NC96 275 aa12.54□□□□□ -0.4
NEK9-204ENST00000554258 ASB13Q8WXK3 278 aa12.54□□□□□ -0.4
NEK9-204ENST00000554258 RAB40CQ96S21 281 aa12.54□□□□□ -0.4
NEK9-204ENST00000554258 SCRT2Q9NQ03 307 aa12.54□□□□□ -0.4
NEK9-204ENST00000554258 LOC102724200A0A096LPH7 203 aaPredicted RBP12.53□□□□□ -0.4
NEK9-204ENST00000554258 FAM223BA6NKX1 122 aa12.53□□□□□ -0.4
NEK9-204ENST00000554258 CYB5BO43169 146 aa12.53□□□□□ -0.4
NEK9-204ENST00000554258 SPRY2O43597 315 aa12.53□□□□□ -0.4
NEK9-204ENST00000554258 TRGV3P03979 118 aa12.53□□□□□ -0.4
NEK9-204ENST00000554258 IFNA4P05014 189 aa12.53□□□□□ -0.4
NEK9-204ENST00000554258 DEFA4P12838 97 aa12.53□□□□□ -0.4
NEK9-204ENST00000554258 SUB1P53999 127 aaKnown RBP eCLIP12.53□□□□□ -0.4
NEK9-204ENST00000554258 RHOGP84095 191 aa12.53□□□□□ -0.4
NEK9-204ENST00000554258 RAB32Q13637 225 aa12.53□□□□□ -0.4
NEK9-204ENST00000554258 SLC25A24Q6NUK1 477 aa12.53□□□□□ -0.4
NEK9-204ENST00000554258 FAM223AQ8IWN6 122 aa12.53□□□□□ -0.4
NEK9-204ENST00000554258 SLC24A4Q8NFF2 622 aa12.53□□□□□ -0.4
NEK9-204ENST00000554258 ZNF355PQ9NSJ1 428 aa12.53□□□□□ -0.4
NEK9-204ENST00000554258 TP53TG1Q9Y2A0 90 aa12.53□□□□□ -0.4
NEK9-204ENST00000554258 A0A0G2JLM5 398 aa12.52□□□□□ -0.41
NEK9-204ENST00000554258 ANKRD34BA5PLL1 514 aa12.52□□□□□ -0.41
NEK9-204ENST00000554258 C15orf62A8K5M9 175 aa12.52□□□□□ -0.41
NEK9-204ENST00000554258 ZNF785A8K8V0 405 aa12.52□□□□□ -0.41
NEK9-204ENST00000554258 WRBO00258 174 aa12.52□□□□□ -0.41
NEK9-204ENST00000554258 OR2J3O76001 311 aa12.52□□□□□ -0.41
NEK9-204ENST00000554258 IAPPP10997 89 aa12.52□□□□□ -0.41
NEK9-204ENST00000554258 GUCA2BQ16661 112 aa12.52□□□□□ -0.41
NEK9-204ENST00000554258 CD300EQ496F6 205 aaPredicted RBP12.52□□□□□ -0.41
NEK9-204ENST00000554258 NOXA1Q86UR1 476 aa12.52□□□□□ -0.41
NEK9-204ENST00000554258 C2CD4CQ8TF44 421 aa12.52□□□□□ -0.41
NEK9-204ENST00000554258 CHAC2Q8WUX2 184 aa12.52□□□□□ -0.41
NEK9-204ENST00000554258 ZNF436Q9C0F3 470 aaPredicted RBP12.52□□□□□ -0.41
NEK9-204ENST00000554258 THYN1Q9P016 225 aa12.52□□□□□ -0.41
NEK9-204ENST00000554258 FBXL17Q9UF56 701 aa12.52□□□□□ -0.41
NEK9-204ENST00000554258 FBXL7Q9UJT9 491 aa12.52□□□□□ -0.41
NEK9-204ENST00000554258 H0YIZ8 118 aa12.51□□□□□ -0.41
NEK9-204ENST00000554258 I3L2K1 104 aa12.51□□□□□ -0.41
NEK9-204ENST00000554258 K7EIM0 57 aa12.51□□□□□ -0.41
NEK9-204ENST00000554258 SSSCA1O60232 199 aa12.51□□□□□ -0.41
NEK9-204ENST00000554258 TSC22D2O75157 780 aa12.51□□□□□ -0.41
NEK9-204ENST00000554258 SCGB1D2O95969 90 aa12.51□□□□□ -0.41
NEK9-204ENST00000554258 GIPP09681 153 aaPredicted RBP12.51□□□□□ -0.41
NEK9-204ENST00000554258 NPY1RP25929 384 aa12.51□□□□□ -0.41
NEK9-204ENST00000554258 RNASEH2CQ8TDP1 164 aaKnown RBP12.51□□□□□ -0.41
NEK9-204ENST00000554258 VN1R17PQ8TDU5 208 aa12.51□□□□□ -0.41
NEK9-204ENST00000554258 PPP1R1CQ8WVI7 109 aa12.51□□□□□ -0.41
NEK9-204ENST00000554258 RNF126Q9BV68 326 aa12.51□□□□□ -0.41
NEK9-204ENST00000554258 CORTO00230 105 aa12.5□□□□□ -0.41
NEK9-204ENST00000554258 IFNA10P01566 189 aa12.5□□□□□ -0.41
NEK9-204ENST00000554258 RPP30P78346 268 aaKnown RBP12.5□□□□□ -0.41
NEK9-204ENST00000554258 ATP5G2Q06055 141 aa12.5□□□□□ -0.41
NEK9-204ENST00000554258 DEFB135Q30KP9 77 aa12.5□□□□□ -0.41
NEK9-204ENST00000554258 C15orf32Q32M92 178 aa12.5□□□□□ -0.41
NEK9-204ENST00000554258 ZNF343Q6P1L6 599 aa12.5□□□□□ -0.41
NEK9-204ENST00000554258 TMEM14EPQ6UXP3 125 aa12.5□□□□□ -0.41
NEK9-204ENST00000554258 ATP6V0BQ99437 205 aa12.5□□□□□ -0.41
NEK9-204ENST00000554258 PSENENQ9NZ42 101 aa12.5□□□□□ -0.41
NEK9-204ENST00000554258 LSM5Q9Y4Y9 91 aaKnown RBP12.5□□□□□ -0.41
NEK9-204ENST00000554258 PMS2P5A8MQ11 134 aa12.49□□□□□ -0.41
NEK9-204ENST00000554258 MPC2O95563 127 aa12.49□□□□□ -0.41
NEK9-204ENST00000554258 RAP2BP61225 183 aa12.49□□□□□ -0.41
NEK9-204ENST00000554258 EXOSC2Q13868 293 aaKnown RBP12.49□□□□□ -0.41
NEK9-204ENST00000554258 Q6ZWC4 215 aa12.49□□□□□ -0.41
NEK9-204ENST00000554258 SLC16A13Q7RTY0 426 aa12.49□□□□□ -0.41
NEK9-204ENST00000554258 CXorf58Q96LI9 332 aa12.49□□□□□ -0.41
NEK9-204ENST00000554258 FNDC4Q9H6D8 234 aaPredicted RBP12.49□□□□□ -0.41
NEK9-204ENST00000554258 STRAPQ9Y3F4 350 aaKnown RBP12.49□□□□□ -0.41
NEK9-204ENST00000554258 MFSD2BA6NFX1 497 aa12.48□□□□□ -0.41
NEK9-204ENST00000554258 PRSS46E5RG02 174 aa12.48□□□□□ -0.41
NEK9-204ENST00000554258 MT-CO2P00403 227 aa12.48□□□□□ -0.41
NEK9-204ENST00000554258 RLN2P04090 185 aa12.48□□□□□ -0.41
NEK9-204ENST00000554258 FCGR2BP31994 310 aaPredicted RBP12.48□□□□□ -0.41
NEK9-204ENST00000554258 NANOS2P60321 138 aaKnown RBP12.48□□□□□ -0.41
NEK9-204ENST00000554258 SPANXN5Q5MJ07 72 aa12.48□□□□□ -0.41
NEK9-204ENST00000554258 ZNF502Q8TBZ5 544 aa12.48□□□□□ -0.41
NEK9-204ENST00000554258 SCARB1Q8WTV0 552 aa12.48□□□□□ -0.41
NEK9-204ENST00000554258 MFFQ9GZY8 342 aa12.48□□□□□ -0.41
NEK9-204ENST00000554258 PEMTQ9UBM1 199 aa12.48□□□□□ -0.41
NEK9-204ENST00000554258 APLNQ9ULZ1 77 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms