RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 U3KQ87 197 aa6.35□□□□□ -1.39
PSEN1-209ENST00000553855 NOTCH3Q9UM47 2321 aa6.34□□□□□ -1.39
PSEN1-209ENST00000553855 MEGF8Q7Z7M0 2845 aa6.34□□□□□ -1.39
PSEN1-209ENST00000553855 IGHV3-35A0A0C4DH35 117 aa6.34□□□□□ -1.39
PSEN1-209ENST00000553855 FAM90A26D6RGX4 464 aa6.34□□□□□ -1.39
PSEN1-209ENST00000553855 I3L2K1 104 aa6.34□□□□□ -1.39
PSEN1-209ENST00000553855 IFNA4P05014 189 aa6.34□□□□□ -1.39
PSEN1-209ENST00000553855 RNASE2P10153 161 aaKnown RBP6.34□□□□□ -1.39
PSEN1-209ENST00000553855 SLC25A4P12235 298 aa6.34□□□□□ -1.39
PSEN1-209ENST00000553855 FCGR2BP31994 310 aaPredicted RBP6.34□□□□□ -1.39
PSEN1-209ENST00000553855 MFAP2P55001 183 aa6.34□□□□□ -1.39
PSEN1-209ENST00000553855 DEFA1P59665 94 aa6.34□□□□□ -1.39
PSEN1-209ENST00000553855 DEFA3P59666 94 aa6.34□□□□□ -1.39
PSEN1-209ENST00000553855 TNFRSF9Q07011 255 aa6.34□□□□□ -1.39
PSEN1-209ENST00000553855 GUCA2BQ16661 112 aa6.34□□□□□ -1.39
PSEN1-209ENST00000553855 ANKRD55Q3KP44 614 aa6.34□□□□□ -1.39
PSEN1-209ENST00000553855 AARDQ4LEZ3 155 aa6.34□□□□□ -1.39
PSEN1-209ENST00000553855 C2orf83Q53S99 150 aa6.34□□□□□ -1.39
PSEN1-209ENST00000553855 NMSQ5H8A3 153 aa6.34□□□□□ -1.39
PSEN1-209ENST00000553855 ENKURQ8TC29 256 aa6.34□□□□□ -1.39
PSEN1-209ENST00000553855 NARS2Q96I59 477 aaKnown RBP6.34□□□□□ -1.39
PSEN1-209ENST00000553855 C20orf85Q9H1P6 137 aa6.34□□□□□ -1.39
PSEN1-209ENST00000553855 RBKSQ9H477 322 aa6.34□□□□□ -1.39
PSEN1-209ENST00000553855 DAZ1Q9NQZ3 744 aaKnown RBP6.34□□□□□ -1.39
PSEN1-209ENST00000553855 HSPB7Q9UBY9 170 aa6.34□□□□□ -1.39
PSEN1-209ENST00000553855 FLVCR2Q9UPI3 526 aa6.34□□□□□ -1.39
PSEN1-209ENST00000553855 DMRT1Q9Y5R6 373 aa6.34□□□□□ -1.39
PSEN1-209ENST00000553855 TNCP24821 2201 aa6.34□□□□□ -1.39
PSEN1-209ENST00000553855 A8MWP6 167 aa6.33□□□□□ -1.4
PSEN1-209ENST00000553855 K7EMT4 169 aa6.33□□□□□ -1.4
PSEN1-209ENST00000553855 IGHV3-48P01763 117 aa6.33□□□□□ -1.4
PSEN1-209ENST00000553855 TCRBP04435 133 aa6.33□□□□□ -1.4
PSEN1-209ENST00000553855 ANXA7P20073 488 aaKnown RBP6.33□□□□□ -1.4
PSEN1-209ENST00000553855 GCSHP23434 173 aa6.33□□□□□ -1.4
PSEN1-209ENST00000553855 CBLN1P23435 193 aa6.33□□□□□ -1.4
PSEN1-209ENST00000553855 DHRS2Q13268 280 aa6.33□□□□□ -1.4
PSEN1-209ENST00000553855 GGNBP1Q5YKI7 109 aa6.33□□□□□ -1.4
PSEN1-209ENST00000553855 ZNF600Q6ZNG1 722 aa6.33□□□□□ -1.4
PSEN1-209ENST00000553855 SLC16A13Q7RTY0 426 aa6.33□□□□□ -1.4
PSEN1-209ENST00000553855 HAPLN4Q86UW8 402 aa6.33□□□□□ -1.4
PSEN1-209ENST00000553855 UXS1Q8NBZ7 420 aa6.33□□□□□ -1.4
PSEN1-209ENST00000553855 TMEM190Q8WZ59 177 aa6.33□□□□□ -1.4
PSEN1-209ENST00000553855 ST8SIA2Q92186 375 aa6.33□□□□□ -1.4
PSEN1-209ENST00000553855 SLC35E1Q96K37 410 aa6.33□□□□□ -1.4
PSEN1-209ENST00000553855 KRTAP9-2Q9BYQ4 174 aa6.33□□□□□ -1.4
PSEN1-209ENST00000553855 ZNF436Q9C0F3 470 aaPredicted RBP6.33□□□□□ -1.4
PSEN1-209ENST00000553855 TMEM231Q9H6L2 316 aa6.33□□□□□ -1.4
PSEN1-209ENST00000553855 TUBA4BQ9H853 241 aa6.33□□□□□ -1.4
PSEN1-209ENST00000553855 GPN1Q9HCN4 374 aaPredicted RBP6.33□□□□□ -1.4
PSEN1-209ENST00000553855 TRAV6A0A075B6T7 132 aa6.32□□□□□ -1.4
PSEN1-209ENST00000553855 TRAV25A0A0B4J276 109 aa6.32□□□□□ -1.4
PSEN1-209ENST00000553855 A0A1W2PS18 150 aa6.32□□□□□ -1.4
PSEN1-209ENST00000553855 C15orf62A8K5M9 175 aa6.32□□□□□ -1.4
PSEN1-209ENST00000553855 PLA2G10O15496 165 aa6.32□□□□□ -1.4
PSEN1-209ENST00000553855 SYNGR2O43760 224 aa6.32□□□□□ -1.4
PSEN1-209ENST00000553855 CLN5O75503 358 aa6.32□□□□□ -1.4
PSEN1-209ENST00000553855 UPK1BO75841 260 aa6.32□□□□□ -1.4
PSEN1-209ENST00000553855 FABP1P07148 127 aa6.32□□□□□ -1.4
PSEN1-209ENST00000553855 CTSGP08311 255 aa6.32□□□□□ -1.4
PSEN1-209ENST00000553855 IAPPP10997 89 aa6.32□□□□□ -1.4
PSEN1-209ENST00000553855 DEFB114Q30KQ6 69 aa6.32□□□□□ -1.4
PSEN1-209ENST00000553855 CD300EQ496F6 205 aaPredicted RBP6.32□□□□□ -1.4
PSEN1-209ENST00000553855 BTNL8Q6UX41 500 aa6.32□□□□□ -1.4
PSEN1-209ENST00000553855 IL34Q6ZMJ4 242 aa6.32□□□□□ -1.4
PSEN1-209ENST00000553855 OR1S2Q8NGQ3 325 aa6.32□□□□□ -1.4
PSEN1-209ENST00000553855 OR4X1Q8NH49 305 aa6.32□□□□□ -1.4
PSEN1-209ENST00000553855 Q8WTZ3 238 aa6.32□□□□□ -1.4
PSEN1-209ENST00000553855 CHRDL1Q9BU40 450 aa6.32□□□□□ -1.4
PSEN1-209ENST00000553855 NUDT15Q9NV35 164 aa6.32□□□□□ -1.4
PSEN1-209ENST00000553855 TRAV14DV4A0A0A6YYC5 116 aa6.31□□□□□ -1.4
PSEN1-209ENST00000553855 TMEM213A2RRL7 107 aa6.31□□□□□ -1.4
PSEN1-209ENST00000553855 FAM25EA8MYX2 175 aa6.31□□□□□ -1.4
PSEN1-209ENST00000553855 ADAP1O75689 374 aa6.31□□□□□ -1.4
PSEN1-209ENST00000553855 TMEM50AO95807 157 aa6.31□□□□□ -1.4
PSEN1-209ENST00000553855 CD5P06127 495 aa6.31□□□□□ -1.4
PSEN1-209ENST00000553855 NHLRC4P0CG21 123 aaPredicted RBP6.31□□□□□ -1.4
PSEN1-209ENST00000553855 BTCP35070 178 aa6.31□□□□□ -1.4
PSEN1-209ENST00000553855 NKX2-1P43699 371 aaPredicted RBP6.31□□□□□ -1.4
PSEN1-209ENST00000553855 RND2P52198 227 aa6.31□□□□□ -1.4
PSEN1-209ENST00000553855 LINC00310P59036 64 aa6.31□□□□□ -1.4
PSEN1-209ENST00000553855 CD81P60033 236 aa6.31□□□□□ -1.4
PSEN1-209ENST00000553855 PAFAH1B2P68402 229 aa6.31□□□□□ -1.4
PSEN1-209ENST00000553855 ASAH1Q13510 395 aa6.31□□□□□ -1.4
PSEN1-209ENST00000553855 ZNF124Q15973 351 aa6.31□□□□□ -1.4
PSEN1-209ENST00000553855 IAH1Q2TAA2 248 aaPredicted RBP6.31□□□□□ -1.4
PSEN1-209ENST00000553855 BSXQ3C1V8 233 aa6.31□□□□□ -1.4
PSEN1-209ENST00000553855 PVRIGQ6DKI7 326 aa6.31□□□□□ -1.4
PSEN1-209ENST00000553855 UNQ9165/PRO28630Q6UXU0 137 aa6.31□□□□□ -1.4
PSEN1-209ENST00000553855 OR52B4Q8NGK2 314 aa6.31□□□□□ -1.4
PSEN1-209ENST00000553855 ZNF431Q8TF32 576 aaPredicted RBP6.31□□□□□ -1.4
PSEN1-209ENST00000553855 MITD1Q8WV92 249 aa6.31□□□□□ -1.4
PSEN1-209ENST00000553855 CACNG8Q8WXS5 425 aa6.31□□□□□ -1.4
PSEN1-209ENST00000553855 ACY3Q96HD9 319 aa6.31□□□□□ -1.4
PSEN1-209ENST00000553855 GRAMD2BQ96HH9 432 aa6.31□□□□□ -1.4
PSEN1-209ENST00000553855 B9D2Q9BPU9 175 aa6.31□□□□□ -1.4
PSEN1-209ENST00000553855 GSKIPQ9P0R6 139 aa6.31□□□□□ -1.4
PSEN1-209ENST00000553855 STRAPQ9Y3F4 350 aaKnown RBP6.31□□□□□ -1.4
PSEN1-209ENST00000553855 PUS1Q9Y606 427 aaKnown RBP eCLIP6.31□□□□□ -1.4
PSEN1-209ENST00000553855 CMYA5Q8N3K9 4069 aa6.31□□□□□ -1.4
PSEN1-209ENST00000553855 C5orf51A6NDU8 294 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms