RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 SMCO4Q9NRQ5 59 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 C21orf62Q9NYP8 219 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 SIGLEC7Q9Y286 467 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 ZNF257Q9Y2Q1 563 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 RNF11Q9Y3C5 154 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 INSIG2Q9Y5U4 225 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 IER3IP1Q9Y5U9 82 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 OVOS2A0A0G2JMS6 1433 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 HFM1A2PYH4 1435 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 C2CD3Q4AC94 2353 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 C10orf71Q711Q0 1435 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 CASKIN1Q8WXD9 1431 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 CHD5Q8TDI0 1954 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 GLI3P10071 1580 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 RICTORQ6R327 1708 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 NCOR1O75376 2440 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 NRXN1Q9ULB1 1477 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 DEPDC5O75140 1603 aa1.37□□□□□ -2.19
VRK1-202ENST00000553683 RELNP78509 3460 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 SPEF2Q9C093 1822 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 THADAQ6YHU6 1953 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 A0A087WXM4 84 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 LOC102724200A0A096LPH7 203 aaPredicted RBP1.36□□□□□ -2.19
VRK1-202ENST00000553683 IGHV3-49A0A0A0MS15 119 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 A0A1W2PRS3 328 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 A6NDN8 102 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 RBFOX3A6NFN3 312 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 CCDC179H3BU77 68 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 H7C1C5 153 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 CDC42EP2O14613 210 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 KDM6AO15550 1401 aaPredicted RBP1.36□□□□□ -2.19
VRK1-202ENST00000553683 OR2T1O43869 369 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 PLCH2O75038 1416 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 OR2H2O95918 312 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 IGLV6-57P01721 117 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 IGKV5-2P06315 115 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 CD2P06729 351 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 OR5AC1P0C628 307 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 IGLC6P0CF74 106 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 AKAIN1P0CW23 69 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 PGA5P0DJD9 388 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 OR12D1P0DN82 309 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 FGF6P10767 208 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 CTLA4P16410 223 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 RAB5AP20339 215 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 IMPA1P29218 277 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 MARCKSL1P49006 195 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 EMP1P54849 157 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 S100A10P60903 97 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 GNG11P61952 73 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 LCN6P62502 163 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 DEFA5Q01523 94 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 SLC38A11Q08AI6 406 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 DHRS2Q13268 280 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 ZNF141Q15928 474 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 LGALSLQ3ZCW2 172 aaPredicted RBP1.36□□□□□ -2.19
VRK1-202ENST00000553683 IBA57Q5T440 356 aaKnown RBP1.36□□□□□ -2.19
VRK1-202ENST00000553683 TMEM244Q5VVB8 128 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 AMMECR1LQ6DCA0 310 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 HCP5Q6MZN7 132 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 RASL11AQ6T310 242 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 ALKAL2Q6UX46 152 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 LHFPL1Q86WI0 220 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 ZNF101Q8IZC7 436 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 C11orf72Q8NBR9 251 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 OR11H7Q8NGC8 314 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 OR51A4Q8NGJ6 313 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 OR51T1Q8NGJ9 327 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 JOSD2Q8TAC2 188 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 ZNF431Q8TF32 576 aaPredicted RBP1.36□□□□□ -2.19
VRK1-202ENST00000553683 RAB2BQ8WUD1 216 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 RXFP2Q8WXD0 754 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 TSLPQ969D9 159 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 TMEM106AQ96A25 262 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 HIST1H2BLQ99880 126 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 PRADC1Q9BSG0 188 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 GGTLC1Q9BX51 225 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 CHST6Q9GZX3 395 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 PBOV1Q9GZY1 135 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 COA1Q9GZY4 146 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 OR2D2Q9H210 308 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 OR51E2Q9H255 320 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 TMEM9BQ9NQ34 198 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 PARP11Q9NR21 331 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 CA10Q9NS85 328 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 MED31Q9Y3C7 131 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 ORC6Q9Y5N6 252 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 A2ML1A8K2U0 1454 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 PZPP20742 1482 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 PRXQ9BXM0 1461 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 TENM4Q6N022 2769 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 WNK3Q9BYP7 1800 aa1.36□□□□□ -2.19
VRK1-202ENST00000553683 TNRC6CQ9HCJ0 1690 aaKnown RBP1.35□□□□□ -2.19
VRK1-202ENST00000553683 ABCC3O15438 1527 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 TOP2AP11388 1531 aaKnown RBP1.35□□□□□ -2.19
VRK1-202ENST00000553683 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.35□□□□□ -2.19
VRK1-202ENST00000553683 DISP1Q96F81 1524 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 FLNCQ14315 2725 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 ADAMTS12P58397 1594 aa1.35□□□□□ -2.19
VRK1-202ENST00000553683 POLQO75417 2590 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms