RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 ZNF600Q6ZNG1 722 aa5.15□□□□□ -1.59
ATXN3-219ENST00000553488 PRSS48Q7RTY5 328 aa5.15□□□□□ -1.59
ATXN3-219ENST00000553488 CENPSQ8N2Z9 138 aa5.15□□□□□ -1.59
ATXN3-219ENST00000553488 STXBP6Q8NFX7 210 aa5.15□□□□□ -1.59
ATXN3-219ENST00000553488 LGALS14Q8TCE9 139 aa5.15□□□□□ -1.59
ATXN3-219ENST00000553488 SLC25A38Q96DW6 304 aa5.15□□□□□ -1.59
ATXN3-219ENST00000553488 FAM210BQ96KR6 192 aa5.15□□□□□ -1.59
ATXN3-219ENST00000553488 TMEM56Q96MV1 263 aa5.15□□□□□ -1.59
ATXN3-219ENST00000553488 RHBDL2Q9NX52 303 aa5.15□□□□□ -1.59
ATXN3-219ENST00000553488 PRNDQ9UKY0 176 aa5.15□□□□□ -1.59
ATXN3-219ENST00000553488 SRRM2Q9UQ35 2752 aaKnown RBP5.14□□□□□ -1.59
ATXN3-219ENST00000553488 ZNF705FA8MVS1 300 aaPredicted RBP5.14□□□□□ -1.59
ATXN3-219ENST00000553488 PGLYRP1O75594 196 aaPredicted RBP5.14□□□□□ -1.59
ATXN3-219ENST00000553488 KRASP01116 189 aa5.14□□□□□ -1.59
ATXN3-219ENST00000553488 IFNA21P01568 189 aa5.14□□□□□ -1.59
ATXN3-219ENST00000553488 IFNA17P01571 189 aa5.14□□□□□ -1.59
ATXN3-219ENST00000553488 ZNF705DP0CH99 300 aaPredicted RBP5.14□□□□□ -1.59
ATXN3-219ENST00000553488 ZNF705BP0CI00 300 aaPredicted RBP5.14□□□□□ -1.59
ATXN3-219ENST00000553488 NPY1RP25929 384 aa5.14□□□□□ -1.59
ATXN3-219ENST00000553488 CRYBB3P26998 211 aa5.14□□□□□ -1.59
ATXN3-219ENST00000553488 LPAR6P43657 344 aa5.14□□□□□ -1.59
ATXN3-219ENST00000553488 P2RY1P47900 373 aa5.14□□□□□ -1.59
ATXN3-219ENST00000553488 RAB32Q13637 225 aa5.14□□□□□ -1.59
ATXN3-219ENST00000553488 C22orf42Q6IC83 251 aa5.14□□□□□ -1.59
ATXN3-219ENST00000553488 ZNF367Q7RTV3 350 aa5.14□□□□□ -1.59
ATXN3-219ENST00000553488 OR5AP2Q8NGF4 316 aa5.14□□□□□ -1.59
ATXN3-219ENST00000553488 PINX1Q96BK5 328 aaKnown RBP5.14□□□□□ -1.59
ATXN3-219ENST00000553488 MOB3AQ96BX8 217 aa5.14□□□□□ -1.59
ATXN3-219ENST00000553488 CCDC90BQ9GZT6 254 aa5.14□□□□□ -1.59
ATXN3-219ENST00000553488 FXYD6Q9H0Q3 95 aa5.14□□□□□ -1.59
ATXN3-219ENST00000553488 TMEM231Q9H6L2 316 aa5.14□□□□□ -1.59
ATXN3-219ENST00000553488 MRPL36Q9P0J6 103 aaKnown RBP5.14□□□□□ -1.59
ATXN3-219ENST00000553488 TPRKBQ9Y3C4 175 aa5.14□□□□□ -1.59
ATXN3-219ENST00000553488 DNAH8Q96JB1 4490 aa5.13□□□□□ -1.59
ATXN3-219ENST00000553488 SNAPC5O75971 98 aa5.13□□□□□ -1.59
ATXN3-219ENST00000553488 TMEM50AO95807 157 aa5.13□□□□□ -1.59
ATXN3-219ENST00000553488 IGKV1-39P01597 117 aa5.13□□□□□ -1.59
ATXN3-219ENST00000553488 IGKV1D-39P04432 117 aa5.13□□□□□ -1.59
ATXN3-219ENST00000553488 FCER2P06734 321 aa5.13□□□□□ -1.59
ATXN3-219ENST00000553488 SPART-AS1P0CW21 52 aa5.13□□□□□ -1.59
ATXN3-219ENST00000553488 FGF9P31371 208 aaPredicted RBP5.13□□□□□ -1.59
ATXN3-219ENST00000553488 NPBWR1P48145 328 aa5.13□□□□□ -1.59
ATXN3-219ENST00000553488 PPP5CP53041 499 aa5.13□□□□□ -1.59
ATXN3-219ENST00000553488 KCTD21Q4G0X4 260 aa5.13□□□□□ -1.59
ATXN3-219ENST00000553488 PSMG4Q5JS54 123 aa5.13□□□□□ -1.59
ATXN3-219ENST00000553488 SFXN4Q6P4A7 337 aa5.13□□□□□ -1.59
ATXN3-219ENST00000553488 OR5H6Q8NGV6 325 aa5.13□□□□□ -1.59
ATXN3-219ENST00000553488 SEC22AQ96IW7 307 aa5.13□□□□□ -1.59
ATXN3-219ENST00000553488 RAB40CQ96S21 281 aa5.13□□□□□ -1.59
ATXN3-219ENST00000553488 TSC22D3Q99576 134 aa5.13□□□□□ -1.59
ATXN3-219ENST00000553488 C1QTNF4Q9BXJ3 329 aa5.13□□□□□ -1.59
ATXN3-219ENST00000553488 SEPSECSQ9HD40 501 aaKnown RBP5.13□□□□□ -1.59
ATXN3-219ENST00000553488 SCRT2Q9NQ03 307 aa5.13□□□□□ -1.59
ATXN3-219ENST00000553488 FKBP11Q9NYL4 201 aa5.13□□□□□ -1.59
ATXN3-219ENST00000553488 XCL2Q9UBD3 114 aa5.13□□□□□ -1.59
ATXN3-219ENST00000553488 DAPK2Q9UIK4 370 aa5.13□□□□□ -1.59
ATXN3-219ENST00000553488 ANAPC10Q9UM13 185 aa5.13□□□□□ -1.59
ATXN3-219ENST00000553488 TRAV18A0A075B6X5 111 aa5.12□□□□□ -1.59
ATXN3-219ENST00000553488 NBDYA0A0U1RRE5 68 aa5.12□□□□□ -1.59
ATXN3-219ENST00000553488 A0A1W2PS18 150 aa5.12□□□□□ -1.59
ATXN3-219ENST00000553488 TMEM189A5PLL7 270 aa5.12□□□□□ -1.59
ATXN3-219ENST00000553488 HELTA6NFD8 242 aa5.12□□□□□ -1.59
ATXN3-219ENST00000553488 FAM90A26D6RGX4 464 aa5.12□□□□□ -1.59
ATXN3-219ENST00000553488 H3BMM0 161 aa5.12□□□□□ -1.59
ATXN3-219ENST00000553488 IGKV1-17P01599 117 aa5.12□□□□□ -1.59
ATXN3-219ENST00000553488 HLA-DRB4P13762 266 aa5.12□□□□□ -1.59
ATXN3-219ENST00000553488 BTF3P20290 206 aaKnown RBP5.12□□□□□ -1.59
ATXN3-219ENST00000553488 NPPCP23582 126 aa5.12□□□□□ -1.59
ATXN3-219ENST00000553488 AQP4P55087 323 aa5.12□□□□□ -1.59
ATXN3-219ENST00000553488 FAM3BP58499 235 aaPredicted RBP5.12□□□□□ -1.59
ATXN3-219ENST00000553488 HERV-K104P61576 105 aa5.12□□□□□ -1.59
ATXN3-219ENST00000553488 OXA1LQ15070 435 aa5.12□□□□□ -1.59
ATXN3-219ENST00000553488 FAM222AQ5U5X8 452 aa5.12□□□□□ -1.59
ATXN3-219ENST00000553488 TMEM88Q6PEY1 159 aa5.12□□□□□ -1.59
ATXN3-219ENST00000553488 DHRS11Q6UWP2 260 aa5.12□□□□□ -1.59
ATXN3-219ENST00000553488 TPRA1Q86W33 373 aa5.12□□□□□ -1.59
ATXN3-219ENST00000553488 C6orf223Q8N319 242 aa5.12□□□□□ -1.59
ATXN3-219ENST00000553488 GLMPQ8WWB7 406 aa5.12□□□□□ -1.59
ATXN3-219ENST00000553488 BORCS5Q969J3 196 aa5.12□□□□□ -1.59
ATXN3-219ENST00000553488 METTL26Q96S19 204 aa5.12□□□□□ -1.59
ATXN3-219ENST00000553488 FNDC4Q9H6D8 234 aaPredicted RBP5.12□□□□□ -1.59
ATXN3-219ENST00000553488 AUNIPQ9H7T9 357 aa5.12□□□□□ -1.59
ATXN3-219ENST00000553488 HEYLQ9NQ87 328 aaPredicted RBP5.12□□□□□ -1.59
ATXN3-219ENST00000553488 FAM212BQ9NTI7 297 aaPredicted RBP5.12□□□□□ -1.59
ATXN3-219ENST00000553488 TXNL4BQ9NX01 149 aaKnown RBP5.12□□□□□ -1.59
ATXN3-219ENST00000553488 EHFQ9NZC4 300 aa5.12□□□□□ -1.59
ATXN3-219ENST00000553488 RRP15Q9Y3B9 282 aaKnown RBP5.12□□□□□ -1.59
ATXN3-219ENST00000553488 HLA-DRB4X5D2U9 266 aa5.12□□□□□ -1.59
ATXN3-219ENST00000553488 A0A0A6YYH2 397 aa5.11□□□□□ -1.59
ATXN3-219ENST00000553488 TEX48A0A1B0GUV7 120 aa5.11□□□□□ -1.59
ATXN3-219ENST00000553488 MEIS3P1A6NDR6 274 aa5.11□□□□□ -1.59
ATXN3-219ENST00000553488 SMIM9A6NGZ8 99 aa5.11□□□□□ -1.59
ATXN3-219ENST00000553488 A6NJ64 397 aa5.11□□□□□ -1.59
ATXN3-219ENST00000553488 INS-IGF2F8WCM5 200 aa5.11□□□□□ -1.59
ATXN3-219ENST00000553488 GPR31O00270 319 aa5.11□□□□□ -1.59
ATXN3-219ENST00000553488 CLN5O75503 358 aa5.11□□□□□ -1.59
ATXN3-219ENST00000553488 RNASE2P10153 161 aaKnown RBP5.11□□□□□ -1.59
ATXN3-219ENST00000553488 EMP1P54849 157 aa5.11□□□□□ -1.59
ATXN3-219ENST00000553488 HSPE1P61604 102 aaKnown RBP5.11□□□□□ -1.59
ATXN3-219ENST00000553488 DHRS2Q13268 280 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms