RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 GGNBP1Q5YKI7 109 aa14.32□□□□□ -0.12
PTCH1-227ENST00000553256 SPATA25Q9BR10 227 aa14.32□□□□□ -0.12
PTCH1-227ENST00000553256 ZMAT4Q9H898 229 aa14.32□□□□□ -0.12
PTCH1-227ENST00000553256 IGHV3OR16-13A0A075B7E8 117 aa14.31□□□□□ -0.12
PTCH1-227ENST00000553256 TRAV30A0A087WSZ9 112 aa14.31□□□□□ -0.12
PTCH1-227ENST00000553256 IGHV3-74A0A0B4J1X5 117 aa14.31□□□□□ -0.12
PTCH1-227ENST00000553256 LINC00854A0A1B0GVQ3 168 aa14.31□□□□□ -0.12
PTCH1-227ENST00000553256 RPS10-NUDT3A0A1W2PQS6 291 aa14.31□□□□□ -0.12
PTCH1-227ENST00000553256 MPTX1A8MV57 137 aa14.31□□□□□ -0.12
PTCH1-227ENST00000553256 PRSS46E5RG02 174 aa14.31□□□□□ -0.12
PTCH1-227ENST00000553256 OR4E1P0C645 316 aa14.31□□□□□ -0.12
PTCH1-227ENST00000553256 YPEL3P61236 119 aaPredicted RBP14.31□□□□□ -0.12
PTCH1-227ENST00000553256 CNPY1Q3B7I2 92 aa14.31□□□□□ -0.12
PTCH1-227ENST00000553256 LAMTOR1Q6IAA8 161 aa14.31□□□□□ -0.12
PTCH1-227ENST00000553256 OR1S1Q8NH92 325 aa14.31□□□□□ -0.12
PTCH1-227ENST00000553256 IGKV1D-37A0A075B6S9 117 aa14.3□□□□□ -0.12
PTCH1-227ENST00000553256 ADAP1O75689 374 aa14.3□□□□□ -0.12
PTCH1-227ENST00000553256 HOXB5P09067 269 aa14.3□□□□□ -0.12
PTCH1-227ENST00000553256 ANXA7P20073 488 aaKnown RBP14.3□□□□□ -0.12
PTCH1-227ENST00000553256 ID3Q02535 119 aa14.3□□□□□ -0.12
PTCH1-227ENST00000553256 LYG2Q86SG7 212 aa14.3□□□□□ -0.12
PTCH1-227ENST00000553256 OR1S2Q8NGQ3 325 aa14.3□□□□□ -0.12
PTCH1-227ENST00000553256 NPIPB3Q92617 1050 aa14.3□□□□□ -0.12
PTCH1-227ENST00000553256 GINS3Q9BRX5 216 aa14.3□□□□□ -0.12
PTCH1-227ENST00000553256 NOXA1Q86UR1 476 aa14.29□□□□□ -0.12
PTCH1-227ENST00000553256 LYSTQ99698 3801 aa14.29□□□□□ -0.12
PTCH1-227ENST00000553256 CCDC32Q9BV29 185 aa14.29□□□□□ -0.12
PTCH1-227ENST00000553256 RETNQ9HD89 108 aa14.29□□□□□ -0.12
PTCH1-227ENST00000553256 LYRM1O43325 122 aa14.28□□□□□ -0.12
PTCH1-227ENST00000553256 IFNA10P01566 189 aa14.28□□□□□ -0.12
PTCH1-227ENST00000553256 OR10J1P30954 320 aa14.28□□□□□ -0.12
PTCH1-227ENST00000553256 GPX4P36969 197 aaPredicted RBP14.28□□□□□ -0.12
PTCH1-227ENST00000553256 INPP1P49441 399 aa14.28□□□□□ -0.12
PTCH1-227ENST00000553256 ETFRF1Q6IPR1 90 aa14.28□□□□□ -0.12
PTCH1-227ENST00000553256 OR4D5Q8NGN0 318 aa14.28□□□□□ -0.12
PTCH1-227ENST00000553256 UBQLN2Q9UHD9 624 aa14.28□□□□□ -0.12
PTCH1-227ENST00000553256 PLECQ15149 4684 aaKnown RBP14.28□□□□□ -0.12
PTCH1-227ENST00000553256 OR4C46A6NHA9 309 aa14.27□□□□□ -0.13
PTCH1-227ENST00000553256 CENPXA8MT69 81 aa14.27□□□□□ -0.13
PTCH1-227ENST00000553256 DFFBO76075 338 aa14.27□□□□□ -0.13
PTCH1-227ENST00000553256 GAMTQ14353 236 aa14.27□□□□□ -0.13
PTCH1-227ENST00000553256 USF2Q15853 346 aaPredicted RBP14.27□□□□□ -0.13
PTCH1-227ENST00000553256 TCF24Q7RTU0 167 aa14.27□□□□□ -0.13
PTCH1-227ENST00000553256 MITD1Q8WV92 249 aa14.27□□□□□ -0.13
PTCH1-227ENST00000553256 TBC1D24Q9ULP9 559 aa14.27□□□□□ -0.13
PTCH1-227ENST00000553256 IGKV1OR2-108A0A075B7D4 117 aa14.26□□□□□ -0.13
PTCH1-227ENST00000553256 TRAV2A0A0B4J234 112 aa14.26□□□□□ -0.13
PTCH1-227ENST00000553256 SYNGR2O43760 224 aa14.26□□□□□ -0.13
PTCH1-227ENST00000553256 TOMM40O96008 361 aa14.26□□□□□ -0.13
PTCH1-227ENST00000553256 CD5P06127 495 aa14.26□□□□□ -0.13
PTCH1-227ENST00000553256 IAPPP10997 89 aa14.26□□□□□ -0.13
PTCH1-227ENST00000553256 GGTLC1Q9BX51 225 aa14.26□□□□□ -0.13
PTCH1-227ENST00000553256 MAGT1Q9H0U3 335 aa14.26□□□□□ -0.13
PTCH1-227ENST00000553256 C20orf85Q9H1P6 137 aa14.26□□□□□ -0.13
PTCH1-227ENST00000553256 LOC102724200A0A096LPH7 203 aaPredicted RBP14.25□□□□□ -0.13
PTCH1-227ENST00000553256 IGHV3-66A0A0C4DH42 116 aa14.25□□□□□ -0.13
PTCH1-227ENST00000553256 TCRBP04435 133 aa14.25□□□□□ -0.13
PTCH1-227ENST00000553256 NPPCP23582 126 aa14.25□□□□□ -0.13
PTCH1-227ENST00000553256 FAM24BQ8N5W8 94 aa14.25□□□□□ -0.13
PTCH1-227ENST00000553256 MUC7Q8TAX7 377 aa14.25□□□□□ -0.13
PTCH1-227ENST00000553256 ACY3Q96HD9 319 aa14.25□□□□□ -0.13
PTCH1-227ENST00000553256 MS4A6AQ9H2W1 248 aa14.25□□□□□ -0.13
PTCH1-227ENST00000553256 PMS2P5A8MQ11 134 aa14.24□□□□□ -0.13
PTCH1-227ENST00000553256 C3orf84H3BNL1 204 aa14.24□□□□□ -0.13
PTCH1-227ENST00000553256 PSG1P11464 419 aa14.24□□□□□ -0.13
PTCH1-227ENST00000553256 PAX9P55771 341 aa14.24□□□□□ -0.13
PTCH1-227ENST00000553256 ZNF124Q15973 351 aa14.24□□□□□ -0.13
PTCH1-227ENST00000553256 STPG3Q8N7X2 389 aa14.24□□□□□ -0.13
PTCH1-227ENST00000553256 THAP8Q8NA92 274 aa14.24□□□□□ -0.13
PTCH1-227ENST00000553256 COQ8AQ8NI60 647 aa14.24□□□□□ -0.13
PTCH1-227ENST00000553256 GLMPQ8WWB7 406 aa14.24□□□□□ -0.13
PTCH1-227ENST00000553256 METTL26Q96S19 204 aa14.24□□□□□ -0.13
PTCH1-227ENST00000553256 OVOL2Q9BRP0 275 aa14.24□□□□□ -0.13
PTCH1-227ENST00000553256 MAP6D1Q9H9H5 199 aa14.24□□□□□ -0.13
PTCH1-227ENST00000553256 DNAH1Q9P2D7 4330 aa14.24□□□□□ -0.13
PTCH1-227ENST00000553256 MED6O75586 246 aa14.23□□□□□ -0.13
PTCH1-227ENST00000553256 IFNA4P05014 189 aa14.23□□□□□ -0.13
PTCH1-227ENST00000553256 IFITM3Q01628 133 aa14.23□□□□□ -0.13
PTCH1-227ENST00000553256 C16orf54Q6UWD8 224 aa14.23□□□□□ -0.13
PTCH1-227ENST00000553256 GBGT1Q8N5D6 347 aa14.23□□□□□ -0.13
PTCH1-227ENST00000553256 DCANP1Q8TF63 244 aa14.23□□□□□ -0.13
PTCH1-227ENST00000553256 Q8WTZ3 238 aa14.23□□□□□ -0.13
PTCH1-227ENST00000553256 CIB3Q96Q77 187 aaPredicted RBP14.23□□□□□ -0.13
PTCH1-227ENST00000553256 K7EQG2 157 aa14.22□□□□□ -0.13
PTCH1-227ENST00000553256 SCGB2A1O75556 95 aa14.22□□□□□ -0.13
PTCH1-227ENST00000553256 P2RY1P47900 373 aa14.22□□□□□ -0.13
PTCH1-227ENST00000553256 POLR2GP62487 172 aaKnown RBP eCLIP14.22□□□□□ -0.13
PTCH1-227ENST00000553256 ZNF90Q03938 601 aa14.22□□□□□ -0.13
PTCH1-227ENST00000553256 C4orf46Q504U0 113 aa14.22□□□□□ -0.13
PTCH1-227ENST00000553256 APRG1Q8IVJ8 170 aa14.22□□□□□ -0.13
PTCH1-227ENST00000553256 PTTG2Q9NZH5 202 aa14.22□□□□□ -0.13
PTCH1-227ENST00000553256 IGKV3-7A0A075B6H7 116 aa14.21□□□□□ -0.13
PTCH1-227ENST00000553256 KIR2DL5BA0A0G2JN68 375 aa14.21□□□□□ -0.13
PTCH1-227ENST00000553256 KIR2DL5BA0A0G2JPC4 375 aa14.21□□□□□ -0.13
PTCH1-227ENST00000553256 A0A1W2PS18 150 aa14.21□□□□□ -0.13
PTCH1-227ENST00000553256 WRBO00258 174 aa14.21□□□□□ -0.13
PTCH1-227ENST00000553256 BUB3O43684 328 aa14.21□□□□□ -0.13
PTCH1-227ENST00000553256 IL4P05112 153 aa14.21□□□□□ -0.13
PTCH1-227ENST00000553256 HNRNPCP07910 306 aaKnown RBP eCLIP14.21□□□□□ -0.13
PTCH1-227ENST00000553256 RD3LP0DJH9 198 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms