RNA–Protein interactions for RNA: ENST00000552783.5

LIMA1-214, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-214ENST00000552783 CHODLQ9H9P2 273 aa3.95□□□□□ -1.78
LIMA1-214ENST00000552783 PLEKHA3Q9HB20 300 aa3.95□□□□□ -1.78
LIMA1-214ENST00000552783 IL19Q9UHD0 177 aa3.95□□□□□ -1.78
LIMA1-214ENST00000552783 LY96Q9Y6Y9 160 aa3.95□□□□□ -1.78
LIMA1-214ENST00000552783 LRBAP50851 2863 aa3.95□□□□□ -1.78
LIMA1-214ENST00000552783 TRAV30A0A087WSZ9 112 aa3.95□□□□□ -1.78
LIMA1-214ENST00000552783 A0A1W2PNU3 283 aaPredicted RBP3.95□□□□□ -1.78
LIMA1-214ENST00000552783 IZUMO1RA6ND01 250 aa3.95□□□□□ -1.78
LIMA1-214ENST00000552783 HIGD1CA8MV81 97 aa3.95□□□□□ -1.78
LIMA1-214ENST00000552783 PLAUP00749 431 aa3.95□□□□□ -1.78
LIMA1-214ENST00000552783 PPBPP02775 128 aa3.95□□□□□ -1.78
LIMA1-214ENST00000552783 REG1AP05451 166 aa3.95□□□□□ -1.78
LIMA1-214ENST00000552783 CECR9P0C854 216 aa3.95□□□□□ -1.78
LIMA1-214ENST00000552783 PPOXP50336 477 aa3.95□□□□□ -1.78
LIMA1-214ENST00000552783 RHOGP84095 191 aa3.95□□□□□ -1.78
LIMA1-214ENST00000552783 PSG9Q00887 426 aa3.95□□□□□ -1.78
LIMA1-214ENST00000552783 C19orf35Q6ZS72 473 aa3.95□□□□□ -1.78
LIMA1-214ENST00000552783 NUDT10Q8NFP7 164 aa3.95□□□□□ -1.78
LIMA1-214ENST00000552783 OR2D3Q8NGH3 330 aa3.95□□□□□ -1.78
LIMA1-214ENST00000552783 NUDT11Q96G61 164 aa3.95□□□□□ -1.78
LIMA1-214ENST00000552783 RPH3ALQ9UNE2 315 aa3.95□□□□□ -1.78
LIMA1-214ENST00000552783 TIMM8BQ9Y5J9 83 aaPredicted RBP3.95□□□□□ -1.78
LIMA1-214ENST00000552783 ARL2-SNX15V9GYD0 113 aa3.95□□□□□ -1.78
LIMA1-214ENST00000552783 TRAV17A0A0B4J275 112 aa3.95□□□□□ -1.78
LIMA1-214ENST00000552783 IGHV1-24A0A0C4DH33 117 aa3.95□□□□□ -1.78
LIMA1-214ENST00000552783 SRRM4A7MD48 611 aaKnown RBP3.95□□□□□ -1.78
LIMA1-214ENST00000552783 E7EUB6 86 aa3.95□□□□□ -1.78
LIMA1-214ENST00000552783 IGKV1-16P04430 117 aa3.95□□□□□ -1.78
LIMA1-214ENST00000552783 APELAP0DMC3 54 aa3.95□□□□□ -1.78
LIMA1-214ENST00000552783 CD59P13987 128 aa3.95□□□□□ -1.78
LIMA1-214ENST00000552783 PRDX2P32119 198 aa3.95□□□□□ -1.78
LIMA1-214ENST00000552783 LOXL3P58215 753 aa3.95□□□□□ -1.78
LIMA1-214ENST00000552783 CCL8P80075 99 aa3.95□□□□□ -1.78
LIMA1-214ENST00000552783 FAM167A-AS1Q96KT0 104 aa3.95□□□□□ -1.78
LIMA1-214ENST00000552783 CXXC4Q9H2H0 198 aa3.95□□□□□ -1.78
LIMA1-214ENST00000552783 GSX1Q9H4S2 264 aaPredicted RBP3.95□□□□□ -1.78
LIMA1-214ENST00000552783 ZNF331Q9NQX6 463 aaPredicted RBP3.95□□□□□ -1.78
LIMA1-214ENST00000552783 BSNQ9UPA5 3926 aa3.94□□□□□ -1.78
LIMA1-214ENST00000552783 H3BTX0 84 aa3.94□□□□□ -1.78
LIMA1-214ENST00000552783 GOSR1O95249 250 aa3.94□□□□□ -1.78
LIMA1-214ENST00000552783 REG1BP48304 166 aa3.94□□□□□ -1.78
LIMA1-214ENST00000552783 ZNF137PP52743 207 aa3.94□□□□□ -1.78
LIMA1-214ENST00000552783 RAB31Q13636 194 aa3.94□□□□□ -1.78
LIMA1-214ENST00000552783 LRRC10Q5BKY1 277 aa3.94□□□□□ -1.78
LIMA1-214ENST00000552783 ZCCHC24Q8N2G6 241 aaKnown RBP3.94□□□□□ -1.78
LIMA1-214ENST00000552783 C9orf106Q8NAJ2 232 aa3.94□□□□□ -1.78
LIMA1-214ENST00000552783 OR2V2Q96R30 315 aa3.94□□□□□ -1.78
LIMA1-214ENST00000552783 ASCL2Q99929 193 aa3.94□□□□□ -1.78
LIMA1-214ENST00000552783 SLC25A2Q9BXI2 301 aa3.94□□□□□ -1.78
LIMA1-214ENST00000552783 CSTL1Q9H114 145 aa3.94□□□□□ -1.78
LIMA1-214ENST00000552783 MRPL27Q9P0M9 148 aaKnown RBP3.94□□□□□ -1.78
LIMA1-214ENST00000552783 ANKRD11Q6UB99 2663 aaPredicted RBP3.94□□□□□ -1.78
LIMA1-214ENST00000552783 DSCAML1Q8TD84 2053 aa3.94□□□□□ -1.78
LIMA1-214ENST00000552783 IGKV1D-17A0A075B6S4 117 aa3.94□□□□□ -1.78
LIMA1-214ENST00000552783 GAGE12BA1L429 117 aa3.94□□□□□ -1.78
LIMA1-214ENST00000552783 C15orf61A6NNL5 157 aa3.94□□□□□ -1.78
LIMA1-214ENST00000552783 PRSS47A8MTI9 375 aa3.94□□□□□ -1.78
LIMA1-214ENST00000552783 ENSAO43768 121 aaKnown RBP3.94□□□□□ -1.78
LIMA1-214ENST00000552783 ZADH2Q8N4Q0 377 aa3.94□□□□□ -1.78
LIMA1-214ENST00000552783 TEX45Q8NA69 505 aa3.94□□□□□ -1.78
LIMA1-214ENST00000552783 OR5B3Q8NH48 314 aa3.94□□□□□ -1.78
LIMA1-214ENST00000552783 GTSF1Q8WW33 167 aa3.94□□□□□ -1.78
LIMA1-214ENST00000552783 DDB2Q92466 427 aa3.94□□□□□ -1.78
LIMA1-214ENST00000552783 KRTAP3-3Q9BYR6 98 aa3.94□□□□□ -1.78
LIMA1-214ENST00000552783 KRTAP3-2Q9BYR7 98 aa3.94□□□□□ -1.78
LIMA1-214ENST00000552783 IDI2-AS1Q9NZ38 188 aa3.94□□□□□ -1.78
LIMA1-214ENST00000552783 SYS1-DBNDD2H3BUS1 97 aa3.94□□□□□ -1.78
LIMA1-214ENST00000552783 CDX4O14627 284 aaPredicted RBP3.94□□□□□ -1.78
LIMA1-214ENST00000552783 MSMPQ1L6U9 139 aa3.94□□□□□ -1.78
LIMA1-214ENST00000552783 CT45A1Q5HYN5 189 aa3.94□□□□□ -1.78
LIMA1-214ENST00000552783 INO80CQ6PI98 192 aaPredicted RBP3.94□□□□□ -1.78
LIMA1-214ENST00000552783 Q6ZT83 130 aa3.94□□□□□ -1.78
LIMA1-214ENST00000552783 SSX8Q7RTT4 187 aa3.94□□□□□ -1.78
LIMA1-214ENST00000552783 PNKDQ8N490 385 aa3.94□□□□□ -1.78
LIMA1-214ENST00000552783 DEFB125Q8N687 156 aa3.94□□□□□ -1.78
LIMA1-214ENST00000552783 CT45A3Q8NHU0 189 aa3.94□□□□□ -1.78
LIMA1-214ENST00000552783 ITLN1Q8WWA0 313 aa3.94□□□□□ -1.78
LIMA1-214ENST00000552783 SLC25A33Q9BSK2 321 aa3.94□□□□□ -1.78
LIMA1-214ENST00000552783 TMEM70Q9BUB7 260 aa3.94□□□□□ -1.78
LIMA1-214ENST00000552783 C7orf69Q9H7B7 122 aa3.94□□□□□ -1.78
LIMA1-214ENST00000552783 TMEM14BQ9NUH8 114 aa3.94□□□□□ -1.78
LIMA1-214ENST00000552783 MRPL36Q9P0J6 103 aaKnown RBP3.94□□□□□ -1.78
LIMA1-214ENST00000552783 NCOR2Q9Y618 2525 aa3.94□□□□□ -1.78
LIMA1-214ENST00000552783 PSMB11A5LHX3 300 aa3.93□□□□□ -1.78
LIMA1-214ENST00000552783 NCR2O95944 276 aa3.93□□□□□ -1.78
LIMA1-214ENST00000552783 SAA2P0DJI9 122 aaPredicted RBP3.93□□□□□ -1.78
LIMA1-214ENST00000552783 KLF5Q13887 457 aaPredicted RBP3.93□□□□□ -1.78
LIMA1-214ENST00000552783 GABRA6Q16445 453 aa3.93□□□□□ -1.78
LIMA1-214ENST00000552783 WDR31Q8NA23 367 aa3.93□□□□□ -1.78
LIMA1-214ENST00000552783 MALRD1Q5VYJ5 2156 aa3.93□□□□□ -1.78
LIMA1-214ENST00000552783 IQCF6A8MYZ5 107 aa3.93□□□□□ -1.78
LIMA1-214ENST00000552783 FTH1P19P0C7X4 201 aa3.93□□□□□ -1.78
LIMA1-214ENST00000552783 HSPE1P61604 102 aaKnown RBP3.93□□□□□ -1.78
LIMA1-214ENST00000552783 PRB3Q04118 309 aaPredicted RBP3.93□□□□□ -1.78
LIMA1-214ENST00000552783 PATE2Q6UY27 113 aa3.93□□□□□ -1.78
LIMA1-214ENST00000552783 C2orf91Q6ZV80 131 aa3.93□□□□□ -1.78
LIMA1-214ENST00000552783 BHLHA15Q7RTS1 189 aaPredicted RBP3.93□□□□□ -1.78
LIMA1-214ENST00000552783 TMEM116Q8NCL8 245 aa3.93□□□□□ -1.78
LIMA1-214ENST00000552783 CCL17Q92583 94 aa3.93□□□□□ -1.78
LIMA1-214ENST00000552783 JMJD8Q96S16 334 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms