RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, human

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB3-222	ENST00000552465	HTN3	P15516	51 aa		11.98	□□□□□ -0.49
CACNB3-222	ENST00000552465	PRSS3	P35030	304 aa		11.98	□□□□□ -0.49
CACNB3-222	ENST00000552465	HOXA1	P49639	335 aa	Predicted RBP	11.98	□□□□□ -0.49
CACNB3-222	ENST00000552465	OXA1L	Q15070	435 aa		11.98	□□□□□ -0.49
CACNB3-222	ENST00000552465		Q8N1X5	172 aa		11.98	□□□□□ -0.49
CACNB3-222	ENST00000552465		Q8WTZ3	238 aa		11.98	□□□□□ -0.49
CACNB3-222	ENST00000552465	NRN1	Q9NPD7	142 aa		11.98	□□□□□ -0.49
CACNB3-222	ENST00000552465	IGLC1	P0CG04	106 aa		11.97	□□□□□ -0.49
CACNB3-222	ENST00000552465	FAM3B	P58499	235 aa	Predicted RBP	11.97	□□□□□ -0.49
CACNB3-222	ENST00000552465	BSX	Q3C1V8	233 aa		11.97	□□□□□ -0.49
CACNB3-222	ENST00000552465	UBE2NL	Q5JXB2	153 aa		11.97	□□□□□ -0.49
CACNB3-222	ENST00000552465	OR1S2	Q8NGQ3	325 aa		11.97	□□□□□ -0.49
CACNB3-222	ENST00000552465	PDCD10	Q9BUL8	212 aa		11.97	□□□□□ -0.49
CACNB3-222	ENST00000552465	VCX3B	Q9H321	246 aa		11.97	□□□□□ -0.49
CACNB3-222	ENST00000552465	ENY2	Q9NPA8	101 aa		11.97	□□□□□ -0.49
CACNB3-222	ENST00000552465	NKX2-1	P43699	371 aa	Predicted RBP	11.96	□□□□□ -0.49
CACNB3-222	ENST00000552465	FXYD7	P58549	80 aa		11.96	□□□□□ -0.49
CACNB3-222	ENST00000552465	YPEL3	P61236	119 aa	Predicted RBP	11.96	□□□□□ -0.49
CACNB3-222	ENST00000552465	DHODH	Q02127	395 aa		11.96	□□□□□ -0.49
CACNB3-222	ENST00000552465	TMEM88	Q6PEY1	159 aa		11.96	□□□□□ -0.49
CACNB3-222	ENST00000552465	RPS10-NUDT3	A0A1W2PQS6	291 aa		11.95	□□□□□ -0.5
CACNB3-222	ENST00000552465	BUB3	O43684	328 aa		11.95	□□□□□ -0.5
CACNB3-222	ENST00000552465	IGKV3-20	P01619	116 aa		11.95	□□□□□ -0.5
CACNB3-222	ENST00000552465	AKR1C2	P52895	323 aa		11.95	□□□□□ -0.5
CACNB3-222	ENST00000552465	USF2	Q15853	346 aa	Predicted RBP	11.95	□□□□□ -0.5
CACNB3-222	ENST00000552465	GDF5OS	Q5U4N7	250 aa		11.95	□□□□□ -0.5
CACNB3-222	ENST00000552465	PRSS54	Q6PEW0	395 aa		11.95	□□□□□ -0.5
CACNB3-222	ENST00000552465	SIGLEC15	Q6ZMC9	328 aa		11.95	□□□□□ -0.5
CACNB3-222	ENST00000552465	SAMD12	Q8N8I0	201 aa		11.95	□□□□□ -0.5
CACNB3-222	ENST00000552465	GPX8	Q8TED1	209 aa		11.95	□□□□□ -0.5
CACNB3-222	ENST00000552465	RAB26	Q9ULW5	256 aa		11.95	□□□□□ -0.5
CACNB3-222	ENST00000552465	TMED3	Q9Y3Q3	217 aa		11.95	□□□□□ -0.5
CACNB3-222	ENST00000552465	ATG12	O94817	140 aa		11.94	□□□□□ -0.5
CACNB3-222	ENST00000552465	OR10J1	P30954	320 aa		11.94	□□□□□ -0.5
CACNB3-222	ENST00000552465	RND2	P52198	227 aa		11.94	□□□□□ -0.5
CACNB3-222	ENST00000552465	DEFB1	P60022	68 aa		11.94	□□□□□ -0.5
CACNB3-222	ENST00000552465	RND3	P61587	244 aa		11.94	□□□□□ -0.5
CACNB3-222	ENST00000552465	CROCCP3	Q8IVE0	287 aa		11.94	□□□□□ -0.5
CACNB3-222	ENST00000552465	TP53RK	Q96S44	253 aa		11.94	□□□□□ -0.5
CACNB3-222	ENST00000552465	YTHDF1	Q9BYJ9	559 aa	Known RBP	11.94	□□□□□ -0.5
CACNB3-222	ENST00000552465	YTHDF2	Q9Y5A9	579 aa	Known RBP	11.94	□□□□□ -0.5
CACNB3-222	ENST00000552465	IL4	P05112	153 aa		11.93	□□□□□ -0.5
CACNB3-222	ENST00000552465	C6orf223	Q8N319	242 aa		11.93	□□□□□ -0.5
CACNB3-222	ENST00000552465	ZNF709	Q8N972	641 aa		11.93	□□□□□ -0.5
CACNB3-222	ENST00000552465	CLUHP3	Q96NS8	147 aa		11.93	□□□□□ -0.5
CACNB3-222	ENST00000552465	SAV1	Q9H4B6	383 aa	Predicted RBP	11.93	□□□□□ -0.5
CACNB3-222	ENST00000552465	SCRT2	Q9NQ03	307 aa		11.93	□□□□□ -0.5
CACNB3-222	ENST00000552465	NACA	E9PAV3	2078 aa		11.92	□□□□□ -0.5
CACNB3-222	ENST00000552465	NBDY	A0A0U1RRE5	68 aa		11.92	□□□□□ -0.5
CACNB3-222	ENST00000552465	SLC25A4	P12235	298 aa		11.92	□□□□□ -0.5
CACNB3-222	ENST00000552465	PGAM2	P15259	253 aa		11.92	□□□□□ -0.5
CACNB3-222	ENST00000552465	PI3	P19957	117 aa		11.92	□□□□□ -0.5
CACNB3-222	ENST00000552465	HTR2B	P41595	481 aa		11.92	□□□□□ -0.5
CACNB3-222	ENST00000552465	C15orf53	Q8NAA6	179 aa		11.92	□□□□□ -0.5
CACNB3-222	ENST00000552465	ZNF486	Q96H40	463 aa	Predicted RBP	11.92	□□□□□ -0.5
CACNB3-222	ENST00000552465	LINC00052	Q96N35	136 aa		11.92	□□□□□ -0.5
CACNB3-222	ENST00000552465	ATG101	Q9BSB4	218 aa		11.92	□□□□□ -0.5
CACNB3-222	ENST00000552465	GOLT1B	Q9Y3E0	138 aa		11.92	□□□□□ -0.5
CACNB3-222	ENST00000552465		A0A0G2JRQ6	117 aa		11.91	□□□□□ -0.5
CACNB3-222	ENST00000552465	C3orf85	A0A1B0GTC6	90 aa		11.91	□□□□□ -0.5
CACNB3-222	ENST00000552465	LOC102723971	A0A1B0GUV8	181 aa		11.91	□□□□□ -0.5
CACNB3-222	ENST00000552465	GSTZ1	O43708	216 aa	Predicted RBP	11.91	□□□□□ -0.5
CACNB3-222	ENST00000552465	HBE1	P02100	147 aa		11.91	□□□□□ -0.5
CACNB3-222	ENST00000552465	PIGP	P57054	158 aa		11.91	□□□□□ -0.5
CACNB3-222	ENST00000552465	SPCS3	P61009	180 aa		11.91	□□□□□ -0.5
CACNB3-222	ENST00000552465	DAD1	P61803	113 aa		11.91	□□□□□ -0.5
CACNB3-222	ENST00000552465	FOXI2	Q6ZQN5	318 aa		11.91	□□□□□ -0.5
CACNB3-222	ENST00000552465	C1orf158	Q8N1D5	194 aa		11.91	□□□□□ -0.5
CACNB3-222	ENST00000552465	OR4B1	Q8NGF8	309 aa		11.91	□□□□□ -0.5
CACNB3-222	ENST00000552465	SLC35B3	Q9H1N7	401 aa		11.91	□□□□□ -0.5
CACNB3-222	ENST00000552465	SCPEP1	Q9HB40	452 aa		11.91	□□□□□ -0.5
CACNB3-222	ENST00000552465	TOMM40	O96008	361 aa		11.9	□□□□□ -0.5
CACNB3-222	ENST00000552465	RD3L	P0DJH9	198 aa		11.9	□□□□□ -0.5
CACNB3-222	ENST00000552465	RCVRN	P35243	200 aa		11.9	□□□□□ -0.5
CACNB3-222	ENST00000552465	TGFBR1	P36897	503 aa		11.9	□□□□□ -0.5
CACNB3-222	ENST00000552465	RPS19	P39019	145 aa	Known RBP	11.9	□□□□□ -0.5
CACNB3-222	ENST00000552465	TRIM16L	Q309B1	348 aa		11.9	□□□□□ -0.5
CACNB3-222	ENST00000552465	SP6	Q3SY56	376 aa		11.9	□□□□□ -0.5
CACNB3-222	ENST00000552465	C2orf83	Q53S99	150 aa		11.9	□□□□□ -0.5
CACNB3-222	ENST00000552465	GSG1L	Q6UXU4	331 aa		11.9	□□□□□ -0.5
CACNB3-222	ENST00000552465	ZNRF2	Q8NHG8	242 aa		11.9	□□□□□ -0.5
CACNB3-222	ENST00000552465	RNASEH2C	Q8TDP1	164 aa	Known RBP	11.9	□□□□□ -0.5
CACNB3-222	ENST00000552465	RRNAD1	Q96FB5	475 aa	Known RBP	11.9	□□□□□ -0.5
CACNB3-222	ENST00000552465	C7orf50	Q9BRJ6	194 aa	Known RBP	11.9	□□□□□ -0.5
CACNB3-222	ENST00000552465	WDR12	Q9GZL7	423 aa	Known RBP	11.9	□□□□□ -0.5
CACNB3-222	ENST00000552465		M0QYG6	137 aa		11.89	□□□□□ -0.51
CACNB3-222	ENST00000552465	NXPH3	O95157	252 aa		11.89	□□□□□ -0.51
CACNB3-222	ENST00000552465	ID1	P41134	155 aa		11.89	□□□□□ -0.51
CACNB3-222	ENST00000552465	PSG9	Q00887	426 aa		11.89	□□□□□ -0.51
CACNB3-222	ENST00000552465	ZNF79	Q15937	498 aa		11.89	□□□□□ -0.51
CACNB3-222	ENST00000552465	RRN3P1	Q2M238	152 aa		11.89	□□□□□ -0.51
CACNB3-222	ENST00000552465	AARD	Q4LEZ3	155 aa		11.89	□□□□□ -0.51
CACNB3-222	ENST00000552465	OR52E5	Q8NH55	327 aa		11.89	□□□□□ -0.51
CACNB3-222	ENST00000552465	NPIPB3	Q92617	1050 aa		11.89	□□□□□ -0.51
CACNB3-222	ENST00000552465	HEYL	Q9NQ87	328 aa	Predicted RBP	11.89	□□□□□ -0.51
CACNB3-222	ENST00000552465	KLK11	Q9UBX7	282 aa		11.89	□□□□□ -0.51
CACNB3-222	ENST00000552465	LRP1B	Q9NZR2	4599 aa		11.89	□□□□□ -0.51
CACNB3-222	ENST00000552465	PSG1	P11464	419 aa		11.88	□□□□□ -0.51
CACNB3-222	ENST00000552465	SPATA31B1P	Q5VZV4	182 aa		11.88	□□□□□ -0.51
CACNB3-222	ENST00000552465	ETFRF1	Q6IPR1	90 aa		11.88	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms