RNA–Protein interactions for RNA: ENST00000552188.1

CCDC65-204, Transcript of coiled-coil domain containing 65, humanhuman

TSL 3

Gene CCDC65, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-204ENST00000552188 WRBO00258 174 aa4.46□□□□□ -1.7
CCDC65-204ENST00000552188 SFT2D2O95562 160 aa4.46□□□□□ -1.7
CCDC65-204ENST00000552188 IFNA21P01568 189 aa4.46□□□□□ -1.7
CCDC65-204ENST00000552188 IFNA4P05014 189 aa4.46□□□□□ -1.7
CCDC65-204ENST00000552188 CTSGP08311 255 aa4.46□□□□□ -1.7
CCDC65-204ENST00000552188 HOXB5P09067 269 aa4.46□□□□□ -1.7
CCDC65-204ENST00000552188 IGHV4-30-4P0DP06 118 aa4.46□□□□□ -1.7
CCDC65-204ENST00000552188 RNASE2P10153 161 aaKnown RBP4.46□□□□□ -1.7
CCDC65-204ENST00000552188 IL7P13232 177 aa4.46□□□□□ -1.7
CCDC65-204ENST00000552188 EDN2P20800 178 aa4.46□□□□□ -1.7
CCDC65-204ENST00000552188 NPY1RP25929 384 aa4.46□□□□□ -1.7
CCDC65-204ENST00000552188 UBE2MP61081 183 aaKnown RBP4.46□□□□□ -1.7
CCDC65-204ENST00000552188 RAB11AP62491 216 aa4.46□□□□□ -1.7
CCDC65-204ENST00000552188 SUPT4H1P63272 117 aaKnown RBP4.46□□□□□ -1.7
CCDC65-204ENST00000552188 PAFAH1B2P68402 229 aa4.46□□□□□ -1.7
CCDC65-204ENST00000552188 RPP30P78346 268 aaKnown RBP4.46□□□□□ -1.7
CCDC65-204ENST00000552188 TNFRSF9Q07011 255 aa4.46□□□□□ -1.7
CCDC65-204ENST00000552188 CNPY1Q3B7I2 92 aa4.46□□□□□ -1.7
CCDC65-204ENST00000552188 C11orf87Q6NUJ2 197 aa4.46□□□□□ -1.7
CCDC65-204ENST00000552188 ZNF600Q6ZNG1 722 aa4.46□□□□□ -1.7
CCDC65-204ENST00000552188 Q6ZRM9 215 aa4.46□□□□□ -1.7
CCDC65-204ENST00000552188 TMEM116Q8NCL8 245 aa4.46□□□□□ -1.7
CCDC65-204ENST00000552188 SLC24A4Q8NFF2 622 aa4.46□□□□□ -1.7
CCDC65-204ENST00000552188 RNASEH2CQ8TDP1 164 aaKnown RBP4.46□□□□□ -1.7
CCDC65-204ENST00000552188 DTD1Q8TEA8 209 aa4.46□□□□□ -1.7
CCDC65-204ENST00000552188 S100ZQ8WXG8 99 aa4.46□□□□□ -1.7
CCDC65-204ENST00000552188 TMEM190Q8WZ59 177 aa4.46□□□□□ -1.7
CCDC65-204ENST00000552188 C16orf92Q96LL3 132 aa4.46□□□□□ -1.7
CCDC65-204ENST00000552188 TMEM231Q9H6L2 316 aa4.46□□□□□ -1.7
CCDC65-204ENST00000552188 MLXQ9UH92 298 aa4.46□□□□□ -1.7
CCDC65-204ENST00000552188 TMED3Q9Y3Q3 217 aa4.46□□□□□ -1.7
CCDC65-204ENST00000552188 TGP01266 2768 aa4.46□□□□□ -1.7
CCDC65-204ENST00000552188 IGKV3-7A0A075B6H7 116 aa4.45□□□□□ -1.7
CCDC65-204ENST00000552188 IGHV3-49A0A0A0MS15 119 aa4.45□□□□□ -1.7
CCDC65-204ENST00000552188 IGHV7-4-1A0A0J9YVY3 117 aa4.45□□□□□ -1.7
CCDC65-204ENST00000552188 A0A1W2PS18 150 aa4.45□□□□□ -1.7
CCDC65-204ENST00000552188 A4D1N5 150 aa4.45□□□□□ -1.7
CCDC65-204ENST00000552188 OR4C46A6NHA9 309 aa4.45□□□□□ -1.7
CCDC65-204ENST00000552188 C15orf62A8K5M9 175 aa4.45□□□□□ -1.7
CCDC65-204ENST00000552188 ZNF785A8K8V0 405 aa4.45□□□□□ -1.7
CCDC65-204ENST00000552188 DNASE2O00115 360 aaPredicted RBP4.45□□□□□ -1.7
CCDC65-204ENST00000552188 CLN5O75503 358 aa4.45□□□□□ -1.7
CCDC65-204ENST00000552188 TMEM50AO95807 157 aa4.45□□□□□ -1.7
CCDC65-204ENST00000552188 CD7P09564 240 aa4.45□□□□□ -1.7
CCDC65-204ENST00000552188 SLC25A4P12235 298 aa4.45□□□□□ -1.7
CCDC65-204ENST00000552188 NPPCP23582 126 aa4.45□□□□□ -1.7
CCDC65-204ENST00000552188 FCGR2BP31994 310 aaPredicted RBP4.45□□□□□ -1.7
CCDC65-204ENST00000552188 PPP1R1AQ13522 171 aa4.45□□□□□ -1.7
CCDC65-204ENST00000552188 C2orf83Q53S99 150 aa4.45□□□□□ -1.7
CCDC65-204ENST00000552188 ADAMTSL5Q6ZMM2 481 aa4.45□□□□□ -1.7
CCDC65-204ENST00000552188 SBSPONQ8IVN8 264 aa4.45□□□□□ -1.7
CCDC65-204ENST00000552188 TMEM61Q8N0U2 210 aa4.45□□□□□ -1.7
CCDC65-204ENST00000552188 Q8N1Y9 231 aa4.45□□□□□ -1.7
CCDC65-204ENST00000552188 DEFB125Q8N687 156 aa4.45□□□□□ -1.7
CCDC65-204ENST00000552188 Q8WTZ3 238 aa4.45□□□□□ -1.7
CCDC65-204ENST00000552188 ACY3Q96HD9 319 aa4.45□□□□□ -1.7
CCDC65-204ENST00000552188 GRAMD2BQ96HH9 432 aa4.45□□□□□ -1.7
CCDC65-204ENST00000552188 SLC35E1Q96K37 410 aa4.45□□□□□ -1.7
CCDC65-204ENST00000552188 WWC2-AS2Q96NR7 200 aa4.45□□□□□ -1.7
CCDC65-204ENST00000552188 RBKSQ9H477 322 aa4.45□□□□□ -1.7
CCDC65-204ENST00000552188 SMPXQ9UHP9 88 aa4.45□□□□□ -1.7
CCDC65-204ENST00000552188 CHTOPQ9Y3Y2 248 aaKnown RBP4.45□□□□□ -1.7
CCDC65-204ENST00000552188 PUS1Q9Y606 427 aaKnown RBP eCLIP4.45□□□□□ -1.7
CCDC65-204ENST00000552188 U3KQ87 197 aa4.45□□□□□ -1.7
CCDC65-204ENST00000552188 PRKDCP78527 4128 aaKnown RBP4.44□□□□□ -1.7
CCDC65-204ENST00000552188 IGHV3OR16-13A0A075B7E8 117 aa4.44□□□□□ -1.7
CCDC65-204ENST00000552188 IGHV3-74A0A0B4J1X5 117 aa4.44□□□□□ -1.7
CCDC65-204ENST00000552188 C9orf170A2RU37 121 aa4.44□□□□□ -1.7
CCDC65-204ENST00000552188 FAM90A26D6RGX4 464 aa4.44□□□□□ -1.7
CCDC65-204ENST00000552188 L7N2F9 121 aa4.44□□□□□ -1.7
CCDC65-204ENST00000552188 PAX4O43316 350 aa4.44□□□□□ -1.7
CCDC65-204ENST00000552188 LYRM1O43325 122 aa4.44□□□□□ -1.7
CCDC65-204ENST00000552188 NDUFB6O95139 128 aa4.44□□□□□ -1.7
CCDC65-204ENST00000552188 CD5P06127 495 aa4.44□□□□□ -1.7
CCDC65-204ENST00000552188 OR4E1P0C645 316 aa4.44□□□□□ -1.7
CCDC65-204ENST00000552188 C8orf88P0DMB2 117 aa4.44□□□□□ -1.7
CCDC65-204ENST00000552188 IAPPP10997 89 aa4.44□□□□□ -1.7
CCDC65-204ENST00000552188 SLC25A6P12236 298 aa4.44□□□□□ -1.7
CCDC65-204ENST00000552188 TFPI2P48307 235 aa4.44□□□□□ -1.7
CCDC65-204ENST00000552188 EIF2B2P49770 351 aaKnown RBP4.44□□□□□ -1.7
CCDC65-204ENST00000552188 RND2P52198 227 aa4.44□□□□□ -1.7
CCDC65-204ENST00000552188 CMC4P56277 68 aaPredicted RBP4.44□□□□□ -1.7
CCDC65-204ENST00000552188 ATP5IP56385 69 aaPredicted RBP4.44□□□□□ -1.7
CCDC65-204ENST00000552188 SRSF3P84103 164 aaKnown RBP4.44□□□□□ -1.7
CCDC65-204ENST00000552188 ZNF846Q147U1 533 aa4.44□□□□□ -1.7
CCDC65-204ENST00000552188 TIGITQ495A1 244 aa4.44□□□□□ -1.7
CCDC65-204ENST00000552188 NMSQ5H8A3 153 aa4.44□□□□□ -1.7
CCDC65-204ENST00000552188 PET117Q6UWS5 81 aa4.44□□□□□ -1.7
CCDC65-204ENST00000552188 TOMM20LQ6UXN7 152 aa4.44□□□□□ -1.7
CCDC65-204ENST00000552188 LYG2Q86SG7 212 aa4.44□□□□□ -1.7
CCDC65-204ENST00000552188 LRTM2Q8N967 370 aa4.44□□□□□ -1.7
CCDC65-204ENST00000552188 OR1S2Q8NGQ3 325 aa4.44□□□□□ -1.7
CCDC65-204ENST00000552188 OR4X1Q8NH49 305 aa4.44□□□□□ -1.7
CCDC65-204ENST00000552188 SUN5Q8TC36 379 aa4.44□□□□□ -1.7
CCDC65-204ENST00000552188 RCHY1Q96PM5 261 aa4.44□□□□□ -1.7
CCDC65-204ENST00000552188 CIB3Q96Q77 187 aaPredicted RBP4.44□□□□□ -1.7
CCDC65-204ENST00000552188 METTL26Q96S19 204 aa4.44□□□□□ -1.7
CCDC65-204ENST00000552188 SPAG8Q99932 426 aaPredicted RBP4.44□□□□□ -1.7
CCDC65-204ENST00000552188 SPATA25Q9BR10 227 aa4.44□□□□□ -1.7
CCDC65-204ENST00000552188 CCDC32Q9BV29 185 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms