RNA–Protein interactions for RNA: ENST00000552162.5

RAB5C-209, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5C, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-209ENST00000552162 HLA-DRB4X5D2U9 266 aa11.62□□□□□ -0.55
RAB5C-209ENST00000552162 IGHV3OR16-12A0A075B7B8 117 aa11.61□□□□□ -0.55
RAB5C-209ENST00000552162 TEX48A0A1B0GUV7 120 aa11.61□□□□□ -0.55
RAB5C-209ENST00000552162 SMIM9A6NGZ8 99 aa11.61□□□□□ -0.55
RAB5C-209ENST00000552162 C16orf90A8MZG2 172 aa11.61□□□□□ -0.55
RAB5C-209ENST00000552162 IGLC1P0CG04 106 aa11.61□□□□□ -0.55
RAB5C-209ENST00000552162 TGFBR1P36897 503 aa11.61□□□□□ -0.55
RAB5C-209ENST00000552162 BSXQ3C1V8 233 aa11.61□□□□□ -0.55
RAB5C-209ENST00000552162 MAPKAPK5-AS1Q8N8E1 139 aa11.61□□□□□ -0.55
RAB5C-209ENST00000552162 OR1S2Q8NGQ3 325 aa11.61□□□□□ -0.55
RAB5C-209ENST00000552162 TP53RKQ96S44 253 aa11.61□□□□□ -0.55
RAB5C-209ENST00000552162 NIPSNAP3BQ9BS92 247 aa11.61□□□□□ -0.55
RAB5C-209ENST00000552162 SEPSECSQ9HD40 501 aaKnown RBP11.61□□□□□ -0.55
RAB5C-209ENST00000552162 DKK2Q9UBU2 259 aa11.61□□□□□ -0.55
RAB5C-209ENST00000552162 RFNGQ9Y644 331 aa11.61□□□□□ -0.55
RAB5C-209ENST00000552162 RPS10-NUDT3A0A1W2PQS6 291 aa11.6□□□□□ -0.55
RAB5C-209ENST00000552162 CDK2AP2O75956 126 aa11.6□□□□□ -0.55
RAB5C-209ENST00000552162 ATG12O94817 140 aa11.6□□□□□ -0.55
RAB5C-209ENST00000552162 PGAM2P15259 253 aa11.6□□□□□ -0.55
RAB5C-209ENST00000552162 HTN3P15516 51 aa11.6□□□□□ -0.55
RAB5C-209ENST00000552162 PI3P19957 117 aa11.6□□□□□ -0.55
RAB5C-209ENST00000552162 RND3P61587 244 aa11.6□□□□□ -0.55
RAB5C-209ENST00000552162 USF2Q15853 346 aaPredicted RBP11.6□□□□□ -0.55
RAB5C-209ENST00000552162 FAM222AQ5U5X8 452 aa11.6□□□□□ -0.55
RAB5C-209ENST00000552162 SIGLEC15Q6ZMC9 328 aa11.6□□□□□ -0.55
RAB5C-209ENST00000552162 Q8WTZ3 238 aa11.6□□□□□ -0.55
RAB5C-209ENST00000552162 IGKV3-20P01619 116 aa11.59□□□□□ -0.55
RAB5C-209ENST00000552162 IL4P05112 153 aa11.59□□□□□ -0.55
RAB5C-209ENST00000552162 OR10J1P30954 320 aa11.59□□□□□ -0.55
RAB5C-209ENST00000552162 RCVRNP35243 200 aa11.59□□□□□ -0.55
RAB5C-209ENST00000552162 NKX2-1P43699 371 aaPredicted RBP11.59□□□□□ -0.55
RAB5C-209ENST00000552162 RND2P52198 227 aa11.59□□□□□ -0.55
RAB5C-209ENST00000552162 PIGPP57054 158 aa11.59□□□□□ -0.55
RAB5C-209ENST00000552162 FXYD7P58549 80 aa11.59□□□□□ -0.55
RAB5C-209ENST00000552162 YPEL3P61236 119 aaPredicted RBP11.59□□□□□ -0.55
RAB5C-209ENST00000552162 DHODHQ02127 395 aa11.59□□□□□ -0.55
RAB5C-209ENST00000552162 NEDD8Q15843 81 aa11.59□□□□□ -0.55
RAB5C-209ENST00000552162 GDF5OSQ5U4N7 250 aa11.59□□□□□ -0.55
RAB5C-209ENST00000552162 ZNF486Q96H40 463 aaPredicted RBP11.59□□□□□ -0.55
RAB5C-209ENST00000552162 A0A0G2JRQ6 117 aa11.58□□□□□ -0.56
RAB5C-209ENST00000552162 BUB3O43684 328 aa11.58□□□□□ -0.56
RAB5C-209ENST00000552162 TRIM16LQ309B1 348 aa11.58□□□□□ -0.56
RAB5C-209ENST00000552162 PRSS54Q6PEW0 395 aa11.58□□□□□ -0.56
RAB5C-209ENST00000552162 SCPEP1Q9HB40 452 aa11.58□□□□□ -0.56
RAB5C-209ENST00000552162 LRP1BQ9NZR2 4599 aa11.57□□□□□ -0.56
RAB5C-209ENST00000552162 C3orf85A0A1B0GTC6 90 aa11.57□□□□□ -0.56
RAB5C-209ENST00000552162 M0QYG6 137 aa11.57□□□□□ -0.56
RAB5C-209ENST00000552162 GSTZ1O43708 216 aaPredicted RBP11.57□□□□□ -0.56
RAB5C-209ENST00000552162 SLC25A4P12235 298 aa11.57□□□□□ -0.56
RAB5C-209ENST00000552162 RPS19P39019 145 aaKnown RBP11.57□□□□□ -0.56
RAB5C-209ENST00000552162 HTR2BP41595 481 aa11.57□□□□□ -0.56
RAB5C-209ENST00000552162 DEFB1P60022 68 aa11.57□□□□□ -0.56
RAB5C-209ENST00000552162 TNP2Q05952 138 aa11.57□□□□□ -0.56
RAB5C-209ENST00000552162 OXA1LQ15070 435 aa11.57□□□□□ -0.56
RAB5C-209ENST00000552162 TMEM88Q6PEY1 159 aa11.57□□□□□ -0.56
RAB5C-209ENST00000552162 SNX29P2Q8IUI4 249 aa11.57□□□□□ -0.56
RAB5C-209ENST00000552162 RNASE11Q8TAA1 199 aaKnown RBP11.57□□□□□ -0.56
RAB5C-209ENST00000552162 RRNAD1Q96FB5 475 aaKnown RBP11.57□□□□□ -0.56
RAB5C-209ENST00000552162 YTHDF1Q9BYJ9 559 aaKnown RBP11.57□□□□□ -0.56
RAB5C-209ENST00000552162 SPCS3P61009 180 aa11.56□□□□□ -0.56
RAB5C-209ENST00000552162 SP6Q3SY56 376 aa11.56□□□□□ -0.56
RAB5C-209ENST00000552162 ZNF709Q8N972 641 aa11.56□□□□□ -0.56
RAB5C-209ENST00000552162 SAV1Q9H4B6 383 aaPredicted RBP11.56□□□□□ -0.56
RAB5C-209ENST00000552162 TMED3Q9Y3Q3 217 aa11.56□□□□□ -0.56
RAB5C-209ENST00000552162 TOMM40O96008 361 aa11.55□□□□□ -0.56
RAB5C-209ENST00000552162 FAM3BP58499 235 aaPredicted RBP11.55□□□□□ -0.56
RAB5C-209ENST00000552162 C2orf83Q53S99 150 aa11.55□□□□□ -0.56
RAB5C-209ENST00000552162 FOXI2Q6ZQN5 318 aa11.55□□□□□ -0.56
RAB5C-209ENST00000552162 LHFPL1Q86WI0 220 aa11.55□□□□□ -0.56
RAB5C-209ENST00000552162 RNASEH2CQ8TDP1 164 aaKnown RBP11.55□□□□□ -0.56
RAB5C-209ENST00000552162 HEYLQ9NQ87 328 aaPredicted RBP11.55□□□□□ -0.56
RAB5C-209ENST00000552162 YTHDF2Q9Y5A9 579 aaKnown RBP11.55□□□□□ -0.56
RAB5C-209ENST00000552162 LOC102723971A0A1B0GUV8 181 aa11.54□□□□□ -0.56
RAB5C-209ENST00000552162 SMIM31A0A1B0GVY4 71 aa11.54□□□□□ -0.56
RAB5C-209ENST00000552162 HBE1P02100 147 aa11.54□□□□□ -0.56
RAB5C-209ENST00000552162 RD3LP0DJH9 198 aa11.54□□□□□ -0.56
RAB5C-209ENST00000552162 UCP1P25874 307 aa11.54□□□□□ -0.56
RAB5C-209ENST00000552162 AARDQ4LEZ3 155 aa11.54□□□□□ -0.56
RAB5C-209ENST00000552162 SLC24A4Q8NFF2 622 aa11.54□□□□□ -0.56
RAB5C-209ENST00000552162 OR4B1Q8NGF8 309 aa11.54□□□□□ -0.56
RAB5C-209ENST00000552162 LINC00052Q96N35 136 aa11.54□□□□□ -0.56
RAB5C-209ENST00000552162 SLC35B3Q9H1N7 401 aa11.54□□□□□ -0.56
RAB5C-209ENST00000552162 Q9H521 79 aa11.54□□□□□ -0.56
RAB5C-209ENST00000552162 COPZ2Q9P299 210 aa11.54□□□□□ -0.56
RAB5C-209ENST00000552162 GOLT1BQ9Y3E0 138 aa11.54□□□□□ -0.56
RAB5C-209ENST00000552162 APOA1P02647 267 aa11.53□□□□□ -0.56
RAB5C-209ENST00000552162 DAD1P61803 113 aa11.53□□□□□ -0.56
RAB5C-209ENST00000552162 LSM3P62310 102 aaKnown RBP11.53□□□□□ -0.56
RAB5C-209ENST00000552162 RNASE10Q5GAN6 216 aaKnown RBP11.53□□□□□ -0.56
RAB5C-209ENST00000552162 ETFRF1Q6IPR1 90 aa11.53□□□□□ -0.56
RAB5C-209ENST00000552162 CCDC71LQ8N9Z2 235 aa11.53□□□□□ -0.56
RAB5C-209ENST00000552162 C15orf53Q8NAA6 179 aa11.53□□□□□ -0.56
RAB5C-209ENST00000552162 OR51G1Q8NGK1 321 aa11.53□□□□□ -0.56
RAB5C-209ENST00000552162 OR52E5Q8NH55 327 aa11.53□□□□□ -0.56
RAB5C-209ENST00000552162 NPIPB3Q92617 1050 aa11.53□□□□□ -0.56
RAB5C-209ENST00000552162 ACY3Q96HD9 319 aa11.53□□□□□ -0.56
RAB5C-209ENST00000552162 CLUHP3Q96NS8 147 aa11.53□□□□□ -0.56
RAB5C-209ENST00000552162 C7orf50Q9BRJ6 194 aaKnown RBP11.53□□□□□ -0.56
RAB5C-209ENST00000552162 ATG101Q9BSB4 218 aa11.53□□□□□ -0.56
RAB5C-209ENST00000552162 WDR12Q9GZL7 423 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms