RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 GPX8Q8TED1 209 aa10.14□□□□□ -0.79
CHMP1A-210ENST00000551981 ZNF486Q96H40 463 aaPredicted RBP10.14□□□□□ -0.79
CHMP1A-210ENST00000551981 KRTAP4-5Q9BYR2 181 aa10.14□□□□□ -0.79
CHMP1A-210ENST00000551981 Q9H521 79 aa10.14□□□□□ -0.79
CHMP1A-210ENST00000551981 SCPEP1Q9HB40 452 aa10.14□□□□□ -0.79
CHMP1A-210ENST00000551981 NRN1Q9NPD7 142 aa10.14□□□□□ -0.79
CHMP1A-210ENST00000551981 RFNGQ9Y644 331 aa10.14□□□□□ -0.79
CHMP1A-210ENST00000551981 SMIM31A0A1B0GVY4 71 aa10.13□□□□□ -0.79
CHMP1A-210ENST00000551981 GSTZ1O43708 216 aaPredicted RBP10.13□□□□□ -0.79
CHMP1A-210ENST00000551981 P0C879 139 aa10.13□□□□□ -0.79
CHMP1A-210ENST00000551981 HLA-DRB4P13762 266 aa10.13□□□□□ -0.79
CHMP1A-210ENST00000551981 NEDD8Q15843 81 aa10.13□□□□□ -0.79
CHMP1A-210ENST00000551981 MLANAQ16655 118 aa10.13□□□□□ -0.79
CHMP1A-210ENST00000551981 C1orf134Q5TEV5 83 aa10.13□□□□□ -0.79
CHMP1A-210ENST00000551981 RRNAD1Q96FB5 475 aaKnown RBP10.13□□□□□ -0.79
CHMP1A-210ENST00000551981 HLA-DRB4X5D2U9 266 aa10.13□□□□□ -0.79
CHMP1A-210ENST00000551981 ZNF705FA8MVS1 300 aaPredicted RBP10.12□□□□□ -0.79
CHMP1A-210ENST00000551981 IGLC1P0CG04 106 aa10.12□□□□□ -0.79
CHMP1A-210ENST00000551981 ZNF705DP0CH99 300 aaPredicted RBP10.12□□□□□ -0.79
CHMP1A-210ENST00000551981 ZNF705BP0CI00 300 aaPredicted RBP10.12□□□□□ -0.79
CHMP1A-210ENST00000551981 SLC25A4P12235 298 aa10.12□□□□□ -0.79
CHMP1A-210ENST00000551981 OR10J1P30954 320 aa10.12□□□□□ -0.79
CHMP1A-210ENST00000551981 HTR2BP41595 481 aa10.12□□□□□ -0.79
CHMP1A-210ENST00000551981 PIGPP57054 158 aa10.12□□□□□ -0.79
CHMP1A-210ENST00000551981 YPEL3P61236 119 aaPredicted RBP10.12□□□□□ -0.79
CHMP1A-210ENST00000551981 TRIM16LQ309B1 348 aa10.12□□□□□ -0.79
CHMP1A-210ENST00000551981 BSXQ3C1V8 233 aa10.12□□□□□ -0.79
CHMP1A-210ENST00000551981 SIGLEC15Q6ZMC9 328 aa10.12□□□□□ -0.79
CHMP1A-210ENST00000551981 RNASE11Q8TAA1 199 aaKnown RBP10.12□□□□□ -0.79
CHMP1A-210ENST00000551981 TP53RKQ96S44 253 aa10.12□□□□□ -0.79
CHMP1A-210ENST00000551981 NIPSNAP3BQ9BS92 247 aa10.12□□□□□ -0.79
CHMP1A-210ENST00000551981 IGHV3OR16-12A0A075B7B8 117 aa10.11□□□□□ -0.79
CHMP1A-210ENST00000551981 C3orf85A0A1B0GTC6 90 aa10.11□□□□□ -0.79
CHMP1A-210ENST00000551981 IL4P05112 153 aa10.11□□□□□ -0.79
CHMP1A-210ENST00000551981 RPS19P39019 145 aaKnown RBP10.11□□□□□ -0.79
CHMP1A-210ENST00000551981 NKX2-1P43699 371 aaPredicted RBP10.11□□□□□ -0.79
CHMP1A-210ENST00000551981 RND2P52198 227 aa10.11□□□□□ -0.79
CHMP1A-210ENST00000551981 DHODHQ02127 395 aa10.11□□□□□ -0.79
CHMP1A-210ENST00000551981 PRSS54Q6PEW0 395 aa10.11□□□□□ -0.79
CHMP1A-210ENST00000551981 SNX29P2Q8IUI4 249 aa10.11□□□□□ -0.79
CHMP1A-210ENST00000551981 DKK2Q9UBU2 259 aa10.11□□□□□ -0.79
CHMP1A-210ENST00000551981 M0QYG6 137 aa10.1□□□□□ -0.79
CHMP1A-210ENST00000551981 HTN3P15516 51 aa10.1□□□□□ -0.79
CHMP1A-210ENST00000551981 PI3P19957 117 aa10.1□□□□□ -0.79
CHMP1A-210ENST00000551981 NUP62P37198 522 aaPredicted RBP10.1□□□□□ -0.79
CHMP1A-210ENST00000551981 SPCS3P61009 180 aa10.1□□□□□ -0.79
CHMP1A-210ENST00000551981 OXA1LQ15070 435 aa10.1□□□□□ -0.79
CHMP1A-210ENST00000551981 USF2Q15853 346 aaPredicted RBP10.1□□□□□ -0.79
CHMP1A-210ENST00000551981 FAM222AQ5U5X8 452 aa10.1□□□□□ -0.79
CHMP1A-210ENST00000551981 RNASEH2CQ8TDP1 164 aaKnown RBP10.1□□□□□ -0.79
CHMP1A-210ENST00000551981 HEYLQ9NQ87 328 aaPredicted RBP10.1□□□□□ -0.79
CHMP1A-210ENST00000551981 COPZ2Q9P299 210 aa10.1□□□□□ -0.79
CHMP1A-210ENST00000551981 TMED3Q9Y3Q3 217 aa10.1□□□□□ -0.79
CHMP1A-210ENST00000551981 LRP1BQ9NZR2 4599 aa10.1□□□□□ -0.79
CHMP1A-210ENST00000551981 NACAE9PAV3 2078 aa10.1□□□□□ -0.79
CHMP1A-210ENST00000551981 C16orf90A8MZG2 172 aa10.09□□□□□ -0.79
CHMP1A-210ENST00000551981 BUB3O43684 328 aa10.09□□□□□ -0.79
CHMP1A-210ENST00000551981 CDK2AP2O75956 126 aa10.09□□□□□ -0.79
CHMP1A-210ENST00000551981 IGKV3-20P01619 116 aa10.09□□□□□ -0.79
CHMP1A-210ENST00000551981 APOA1P02647 267 aa10.09□□□□□ -0.79
CHMP1A-210ENST00000551981 TGFBR1P36897 503 aa10.09□□□□□ -0.79
CHMP1A-210ENST00000551981 FAM3BP58499 235 aaPredicted RBP10.09□□□□□ -0.79
CHMP1A-210ENST00000551981 ETFRF1Q6IPR1 90 aa10.09□□□□□ -0.79
CHMP1A-210ENST00000551981 CCDC71LQ8N9Z2 235 aa10.09□□□□□ -0.79
CHMP1A-210ENST00000551981 OR52E5Q8NH55 327 aa10.09□□□□□ -0.79
CHMP1A-210ENST00000551981 PFDN2Q9UHV9 154 aa10.09□□□□□ -0.79
CHMP1A-210ENST00000551981 B3GALNT1O75752 331 aa10.08□□□□□ -0.8
CHMP1A-210ENST00000551981 RD3LP0DJH9 198 aa10.08□□□□□ -0.8
CHMP1A-210ENST00000551981 ID1P41134 155 aa10.08□□□□□ -0.8
CHMP1A-210ENST00000551981 FXYD7P58549 80 aa10.08□□□□□ -0.8
CHMP1A-210ENST00000551981 C2orf83Q53S99 150 aa10.08□□□□□ -0.8
CHMP1A-210ENST00000551981 RNASE10Q5GAN6 216 aaKnown RBP10.08□□□□□ -0.8
CHMP1A-210ENST00000551981 FOXI2Q6ZQN5 318 aa10.08□□□□□ -0.8
CHMP1A-210ENST00000551981 FAM219AQ8IW50 185 aa10.08□□□□□ -0.8
CHMP1A-210ENST00000551981 ARRDC1Q8N5I2 433 aa10.08□□□□□ -0.8
CHMP1A-210ENST00000551981 LINC00052Q96N35 136 aa10.08□□□□□ -0.8
CHMP1A-210ENST00000551981 SAV1Q9H4B6 383 aaPredicted RBP10.08□□□□□ -0.8
CHMP1A-210ENST00000551981 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.08□□□□□ -0.8
CHMP1A-210ENST00000551981 COMMD3Q9UBI1 195 aa10.08□□□□□ -0.8
CHMP1A-210ENST00000551981 GOLT1BQ9Y3E0 138 aa10.08□□□□□ -0.8
CHMP1A-210ENST00000551981 TOMM40O96008 361 aa10.07□□□□□ -0.8
CHMP1A-210ENST00000551981 HBE1P02100 147 aa10.07□□□□□ -0.8
CHMP1A-210ENST00000551981 UCP1P25874 307 aa10.07□□□□□ -0.8
CHMP1A-210ENST00000551981 LSM3P62310 102 aaKnown RBP10.07□□□□□ -0.8
CHMP1A-210ENST00000551981 SP6Q3SY56 376 aa10.07□□□□□ -0.8
CHMP1A-210ENST00000551981 AARDQ4LEZ3 155 aa10.07□□□□□ -0.8
CHMP1A-210ENST00000551981 GDF5OSQ5U4N7 250 aa10.07□□□□□ -0.8
CHMP1A-210ENST00000551981 SPATA31B1PQ5VZV4 182 aa10.07□□□□□ -0.8
CHMP1A-210ENST00000551981 TMEM88Q6PEY1 159 aa10.07□□□□□ -0.8
CHMP1A-210ENST00000551981 NOXA1Q86UR1 476 aa10.07□□□□□ -0.8
CHMP1A-210ENST00000551981 LHFPL1Q86WI0 220 aa10.07□□□□□ -0.8
CHMP1A-210ENST00000551981 MAPKAPK5-AS1Q8N8E1 139 aa10.07□□□□□ -0.8
CHMP1A-210ENST00000551981 C15orf53Q8NAA6 179 aa10.07□□□□□ -0.8
CHMP1A-210ENST00000551981 SLC24A4Q8NFF2 622 aa10.07□□□□□ -0.8
CHMP1A-210ENST00000551981 COQ8AQ8NI60 647 aa10.07□□□□□ -0.8
CHMP1A-210ENST00000551981 ZFAND1Q8TCF1 268 aa10.07□□□□□ -0.8
CHMP1A-210ENST00000551981 ACY3Q96HD9 319 aa10.07□□□□□ -0.8
CHMP1A-210ENST00000551981 CLUHP3Q96NS8 147 aa10.07□□□□□ -0.8
CHMP1A-210ENST00000551981 C7orf50Q9BRJ6 194 aaKnown RBP10.07□□□□□ -0.8
CHMP1A-210ENST00000551981 A0A0G2JRQ6 117 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms