RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 USF2Q15853 346 aaPredicted RBP15.38■□□□□ 0.05
SMARCD1-212ENST00000551966 RNF212Q495C1 297 aa15.38■□□□□ 0.05
SMARCD1-212ENST00000551966 GDF5OSQ5U4N7 250 aa15.38■□□□□ 0.05
SMARCD1-212ENST00000551966 PRSS54Q6PEW0 395 aa15.38■□□□□ 0.05
SMARCD1-212ENST00000551966 Q8WTZ3 238 aa15.38■□□□□ 0.05
SMARCD1-212ENST00000551966 DKK2Q9UBU2 259 aa15.38■□□□□ 0.05
SMARCD1-212ENST00000551966 SMIM9A6NGZ8 99 aa15.37■□□□□ 0.05
SMARCD1-212ENST00000551966 M0QYG6 137 aa15.37■□□□□ 0.05
SMARCD1-212ENST00000551966 HLA-DRB4P13762 266 aa15.37■□□□□ 0.05
SMARCD1-212ENST00000551966 AKR1C2P52895 323 aa15.37■□□□□ 0.05
SMARCD1-212ENST00000551966 FXYD7P58549 80 aa15.37■□□□□ 0.05
SMARCD1-212ENST00000551966 YPEL3P61236 119 aaPredicted RBP15.37■□□□□ 0.05
SMARCD1-212ENST00000551966 SNRPD3P62318 126 aaKnown RBP15.37■□□□□ 0.05
SMARCD1-212ENST00000551966 NEDD8Q15843 81 aa15.37■□□□□ 0.05
SMARCD1-212ENST00000551966 C1orf134Q5TEV5 83 aa15.37■□□□□ 0.05
SMARCD1-212ENST00000551966 PDCD10Q9BUL8 212 aa15.37■□□□□ 0.05
SMARCD1-212ENST00000551966 NRN1Q9NPD7 142 aa15.37■□□□□ 0.05
SMARCD1-212ENST00000551966 HLA-DRB4X5D2U9 266 aa15.37■□□□□ 0.05
SMARCD1-212ENST00000551966 TMEM189A5PLL7 270 aa15.36■□□□□ 0.05
SMARCD1-212ENST00000551966 BUB3O43684 328 aa15.36■□□□□ 0.05
SMARCD1-212ENST00000551966 PGAM2P15259 253 aa15.36■□□□□ 0.05
SMARCD1-212ENST00000551966 PIGPP57054 158 aa15.36■□□□□ 0.05
SMARCD1-212ENST00000551966 SP6Q3SY56 376 aa15.36■□□□□ 0.05
SMARCD1-212ENST00000551966 SOHLH1Q5JUK2 328 aa15.36■□□□□ 0.05
SMARCD1-212ENST00000551966 OR1S2Q8NGQ3 325 aa15.36■□□□□ 0.05
SMARCD1-212ENST00000551966 ENY2Q9NPA8 101 aa15.36■□□□□ 0.05
SMARCD1-212ENST00000551966 NACAE9PAV3 2078 aa15.36■□□□□ 0.05
SMARCD1-212ENST00000551966 IGHV3OR16-12A0A075B7B8 117 aa15.35■□□□□ 0.05
SMARCD1-212ENST00000551966 C3orf85A0A1B0GTC6 90 aa15.35■□□□□ 0.05
SMARCD1-212ENST00000551966 SCGB2A1O75556 95 aa15.35■□□□□ 0.05
SMARCD1-212ENST00000551966 IGKV3-20P01619 116 aa15.35■□□□□ 0.05
SMARCD1-212ENST00000551966 RND2P52198 227 aa15.35■□□□□ 0.05
SMARCD1-212ENST00000551966 FAM222AQ5U5X8 452 aa15.35■□□□□ 0.05
SMARCD1-212ENST00000551966 ZNF486Q96H40 463 aaPredicted RBP15.35■□□□□ 0.05
SMARCD1-212ENST00000551966 NIPSNAP3BQ9BS92 247 aa15.35■□□□□ 0.05
SMARCD1-212ENST00000551966 SCPEP1Q9HB40 452 aa15.35■□□□□ 0.05
SMARCD1-212ENST00000551966 NXPH3O95157 252 aa15.34■□□□□ 0.05
SMARCD1-212ENST00000551966 OR10J1P30954 320 aa15.34■□□□□ 0.05
SMARCD1-212ENST00000551966 RCVRNP35243 200 aa15.34■□□□□ 0.05
SMARCD1-212ENST00000551966 NKX2-1P43699 371 aaPredicted RBP15.34■□□□□ 0.05
SMARCD1-212ENST00000551966 SIGLEC15Q6ZMC9 328 aa15.34■□□□□ 0.05
SMARCD1-212ENST00000551966 LHFPL1Q86WI0 220 aa15.34■□□□□ 0.05
SMARCD1-212ENST00000551966 SNX29P2Q8IUI4 249 aa15.34■□□□□ 0.05
SMARCD1-212ENST00000551966 RFNGQ9Y644 331 aa15.34■□□□□ 0.05
SMARCD1-212ENST00000551966 RPS10-NUDT3A0A1W2PQS6 291 aa15.33■□□□□ 0.04
SMARCD1-212ENST00000551966 IL4P05112 153 aa15.33■□□□□ 0.04
SMARCD1-212ENST00000551966 LSM3P62310 102 aaKnown RBP15.33■□□□□ 0.04
SMARCD1-212ENST00000551966 TNP2Q05952 138 aa15.33■□□□□ 0.04
SMARCD1-212ENST00000551966 AARDQ4LEZ3 155 aa15.33■□□□□ 0.04
SMARCD1-212ENST00000551966 TMEM170AQ8WVE7 144 aa15.33■□□□□ 0.04
SMARCD1-212ENST00000551966 CDK2AP2O75956 126 aa15.32■□□□□ 0.04
SMARCD1-212ENST00000551966 ATG12O94817 140 aa15.32■□□□□ 0.04
SMARCD1-212ENST00000551966 HTN3P15516 51 aa15.32■□□□□ 0.04
SMARCD1-212ENST00000551966 HTR2BP41595 481 aa15.32■□□□□ 0.04
SMARCD1-212ENST00000551966 SPCS3P61009 180 aa15.32■□□□□ 0.04
SMARCD1-212ENST00000551966 OXA1LQ15070 435 aa15.32■□□□□ 0.04
SMARCD1-212ENST00000551966 TRIM16LQ309B1 348 aa15.32■□□□□ 0.04
SMARCD1-212ENST00000551966 ZNF709Q8N972 641 aa15.32■□□□□ 0.04
SMARCD1-212ENST00000551966 SLC25A4P12235 298 aa15.31■□□□□ 0.04
SMARCD1-212ENST00000551966 UCP1P25874 307 aa15.31■□□□□ 0.04
SMARCD1-212ENST00000551966 C2orf83Q53S99 150 aa15.31■□□□□ 0.04
SMARCD1-212ENST00000551966 TMEM88Q6PEY1 159 aa15.31■□□□□ 0.04
SMARCD1-212ENST00000551966 GSG1LQ6UXU4 331 aa15.31■□□□□ 0.04
SMARCD1-212ENST00000551966 C1orf158Q8N1D5 194 aa15.31■□□□□ 0.04
SMARCD1-212ENST00000551966 MAPKAPK5-AS1Q8N8E1 139 aa15.31■□□□□ 0.04
SMARCD1-212ENST00000551966 OR52E5Q8NH55 327 aa15.31■□□□□ 0.04
SMARCD1-212ENST00000551966 NPIPB3Q92617 1050 aa15.31■□□□□ 0.04
SMARCD1-212ENST00000551966 RRNAD1Q96FB5 475 aaKnown RBP15.31■□□□□ 0.04
SMARCD1-212ENST00000551966 COMMD3Q9UBI1 195 aa15.31■□□□□ 0.04
SMARCD1-212ENST00000551966 SMIM31A0A1B0GVY4 71 aa15.3■□□□□ 0.04
SMARCD1-212ENST00000551966 C16orf90A8MZG2 172 aa15.3■□□□□ 0.04
SMARCD1-212ENST00000551966 RNASEH2CQ8TDP1 164 aaKnown RBP15.3■□□□□ 0.04
SMARCD1-212ENST00000551966 WDR12Q9GZL7 423 aaKnown RBP15.3■□□□□ 0.04
SMARCD1-212ENST00000551966 SLC35B3Q9H1N7 401 aa15.3■□□□□ 0.04
SMARCD1-212ENST00000551966 SAV1Q9H4B6 383 aaPredicted RBP15.3■□□□□ 0.04
SMARCD1-212ENST00000551966 LRP1BQ9NZR2 4599 aa15.3■□□□□ 0.04
SMARCD1-212ENST00000551966 TOMM40O96008 361 aa15.29■□□□□ 0.04
SMARCD1-212ENST00000551966 APOA1P02647 267 aa15.29■□□□□ 0.04
SMARCD1-212ENST00000551966 RD3LP0DJH9 198 aa15.29■□□□□ 0.04
SMARCD1-212ENST00000551966 YIPF6Q96EC8 236 aa15.29■□□□□ 0.04
SMARCD1-212ENST00000551966 LINC00052Q96N35 136 aa15.29■□□□□ 0.04
SMARCD1-212ENST00000551966 CLUHP3Q96NS8 147 aa15.29■□□□□ 0.04
SMARCD1-212ENST00000551966 HEYLQ9NQ87 328 aaPredicted RBP15.29■□□□□ 0.04
SMARCD1-212ENST00000551966 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.29■□□□□ 0.04
SMARCD1-212ENST00000551966 KLK11Q9UBX7 282 aa15.29■□□□□ 0.04
SMARCD1-212ENST00000551966 YTHDF2Q9Y5A9 579 aaKnown RBP15.29■□□□□ 0.04
SMARCD1-212ENST00000551966 TEX48A0A1B0GUV7 120 aa15.28■□□□□ 0.04
SMARCD1-212ENST00000551966 PSG1P11464 419 aa15.28■□□□□ 0.04
SMARCD1-212ENST00000551966 ELK1P19419 428 aa15.28■□□□□ 0.04
SMARCD1-212ENST00000551966 OR51G1Q8NGK1 321 aa15.28■□□□□ 0.04
SMARCD1-212ENST00000551966 LHFPL5Q8TAF8 219 aa15.28■□□□□ 0.04
SMARCD1-212ENST00000551966 COPZ2Q9P299 210 aa15.28■□□□□ 0.04
SMARCD1-212ENST00000551966 CD3DP04234 171 aa15.27■□□□□ 0.04
SMARCD1-212ENST00000551966 ZNF79Q15937 498 aa15.27■□□□□ 0.04
SMARCD1-212ENST00000551966 RNASE12Q5GAN4 147 aaKnown RBP15.27■□□□□ 0.04
SMARCD1-212ENST00000551966 FOXI2Q6ZQN5 318 aa15.27■□□□□ 0.04
SMARCD1-212ENST00000551966 OR4B1Q8NGF8 309 aa15.27■□□□□ 0.04
SMARCD1-212ENST00000551966 Q9H521 79 aa15.27■□□□□ 0.04
SMARCD1-212ENST00000551966 LOC102723971A0A1B0GUV8 181 aa15.26■□□□□ 0.03
SMARCD1-212ENST00000551966 SOCS3O14543 225 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms