RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 TENM2Q9NT68 2774 aa13.1□□□□□ -0.31
CDK4-208ENST00000551706 C5orf51A6NDU8 294 aa13.09□□□□□ -0.31
CDK4-208ENST00000551706 FAM25EA8MYX2 175 aa13.09□□□□□ -0.31
CDK4-208ENST00000551706 C3orf84H3BNL1 204 aa13.09□□□□□ -0.31
CDK4-208ENST00000551706 SSSCA1O60232 199 aa13.09□□□□□ -0.31
CDK4-208ENST00000551706 EDN2P20800 178 aa13.09□□□□□ -0.31
CDK4-208ENST00000551706 SPANXN5Q5MJ07 72 aa13.09□□□□□ -0.31
CDK4-208ENST00000551706 ACY3Q96HD9 319 aa13.09□□□□□ -0.31
CDK4-208ENST00000551706 SLC35E1Q96K37 410 aa13.09□□□□□ -0.31
CDK4-208ENST00000551706 RAB40CQ96S21 281 aa13.09□□□□□ -0.31
CDK4-208ENST00000551706 PAIP2BQ9ULR5 123 aaKnown RBP13.09□□□□□ -0.31
CDK4-208ENST00000551706 STRAPQ9Y3F4 350 aaKnown RBP13.09□□□□□ -0.31
CDK4-208ENST00000551706 LSM4Q9Y4Z0 139 aaKnown RBP13.09□□□□□ -0.31
CDK4-208ENST00000551706 CCSO14618 274 aa13.08□□□□□ -0.32
CDK4-208ENST00000551706 SCGB1D2O95969 90 aa13.08□□□□□ -0.32
CDK4-208ENST00000551706 IGKV1-17P01599 117 aa13.08□□□□□ -0.32
CDK4-208ENST00000551706 IGLC1P0CG04 106 aa13.08□□□□□ -0.32
CDK4-208ENST00000551706 OR10J1P30954 320 aa13.08□□□□□ -0.32
CDK4-208ENST00000551706 BMI1P35226 326 aa13.08□□□□□ -0.32
CDK4-208ENST00000551706 BTNL8Q6UX41 500 aa13.08□□□□□ -0.32
CDK4-208ENST00000551706 TOMM20LQ6UXN7 152 aa13.08□□□□□ -0.32
CDK4-208ENST00000551706 GSG1LQ6UXU4 331 aa13.08□□□□□ -0.32
CDK4-208ENST00000551706 GTSCR1Q86UQ5 136 aa13.08□□□□□ -0.32
CDK4-208ENST00000551706 NPIPB3Q92617 1050 aa13.08□□□□□ -0.32
CDK4-208ENST00000551706 ZNF414Q96IQ9 312 aa13.08□□□□□ -0.32
CDK4-208ENST00000551706 SMIM8Q96KF7 97 aa13.08□□□□□ -0.32
CDK4-208ENST00000551706 MLXQ9UH92 298 aa13.08□□□□□ -0.32
CDK4-208ENST00000551706 PUS1Q9Y606 427 aaKnown RBP eCLIP13.08□□□□□ -0.32
CDK4-208ENST00000551706 IGHV3OR16-8A0A075B7F1 116 aa13.07□□□□□ -0.32
CDK4-208ENST00000551706 TRAV14DV4A0A0A6YYC5 116 aa13.07□□□□□ -0.32
CDK4-208ENST00000551706 TRAV25A0A0B4J276 109 aa13.07□□□□□ -0.32
CDK4-208ENST00000551706 IZUMO1RA6ND01 250 aa13.07□□□□□ -0.32
CDK4-208ENST00000551706 TAS2R30P59541 319 aa13.07□□□□□ -0.32
CDK4-208ENST00000551706 YPEL3P61236 119 aaPredicted RBP13.07□□□□□ -0.32
CDK4-208ENST00000551706 C2orf50Q96LR7 162 aa13.07□□□□□ -0.32
CDK4-208ENST00000551706 PSENENQ9NZ42 101 aa13.07□□□□□ -0.32
CDK4-208ENST00000551706 SMAD5-AS1Q9Y6J3 95 aa13.07□□□□□ -0.32
CDK4-208ENST00000551706 IGHV7-4-1A0A0J9YVY3 117 aa13.06□□□□□ -0.32
CDK4-208ENST00000551706 H3BP45 60 aa13.06□□□□□ -0.32
CDK4-208ENST00000551706 ZNF207O43670 478 aaKnown RBP13.06□□□□□ -0.32
CDK4-208ENST00000551706 PTTG1O95997 202 aa13.06□□□□□ -0.32
CDK4-208ENST00000551706 MBPP02686 304 aaPredicted RBP13.06□□□□□ -0.32
CDK4-208ENST00000551706 GAMTQ14353 236 aa13.06□□□□□ -0.32
CDK4-208ENST00000551706 RGS21Q2M5E4 152 aa13.06□□□□□ -0.32
CDK4-208ENST00000551706 TIGITQ495A1 244 aa13.06□□□□□ -0.32
CDK4-208ENST00000551706 LAMTOR1Q6IAA8 161 aa13.06□□□□□ -0.32
CDK4-208ENST00000551706 RBPMS2Q6ZRY4 209 aaKnown RBP13.06□□□□□ -0.32
CDK4-208ENST00000551706 Q8WTZ3 238 aa13.06□□□□□ -0.32
CDK4-208ENST00000551706 ZFAND3Q9H8U3 227 aa13.06□□□□□ -0.32
CDK4-208ENST00000551706 SMPXQ9UHP9 88 aa13.06□□□□□ -0.32
CDK4-208ENST00000551706 SACSQ9NZJ4 4579 aa13.05□□□□□ -0.32
CDK4-208ENST00000551706 SORL1Q92673 2214 aa13.05□□□□□ -0.32
CDK4-208ENST00000551706 TSC22D2O75157 780 aa13.05□□□□□ -0.32
CDK4-208ENST00000551706 GUCA2BQ16661 112 aa13.05□□□□□ -0.32
CDK4-208ENST00000551706 TMEM61Q8N0U2 210 aa13.05□□□□□ -0.32
CDK4-208ENST00000551706 RCL1Q9Y2P8 373 aaKnown RBP13.05□□□□□ -0.32
CDK4-208ENST00000551706 ZNF785A8K8V0 405 aa13.04□□□□□ -0.32
CDK4-208ENST00000551706 L7N2F9 121 aa13.04□□□□□ -0.32
CDK4-208ENST00000551706 CD5P06127 495 aa13.04□□□□□ -0.32
CDK4-208ENST00000551706 FABP1P07148 127 aa13.04□□□□□ -0.32
CDK4-208ENST00000551706 PAX9P55771 341 aa13.04□□□□□ -0.32
CDK4-208ENST00000551706 VAMP2P63027 116 aa13.04□□□□□ -0.32
CDK4-208ENST00000551706 WDR89Q96FK6 387 aaPredicted RBP13.04□□□□□ -0.32
CDK4-208ENST00000551706 METTL26Q96S19 204 aa13.04□□□□□ -0.32
CDK4-208ENST00000551706 RHPN1-AS1Q9BWJ2 59 aa13.04□□□□□ -0.32
CDK4-208ENST00000551706 TMEM231Q9H6L2 316 aa13.04□□□□□ -0.32
CDK4-208ENST00000551706 U3KQK5 164 aa13.04□□□□□ -0.32
CDK4-208ENST00000551706 ZFP92A6NM28 416 aa13.03□□□□□ -0.32
CDK4-208ENST00000551706 PRSS46E5RG02 174 aa13.03□□□□□ -0.32
CDK4-208ENST00000551706 CHEK1O14757 476 aa13.03□□□□□ -0.32
CDK4-208ENST00000551706 TOMM40O96008 361 aa13.03□□□□□ -0.32
CDK4-208ENST00000551706 RD3LP0DJH9 198 aa13.03□□□□□ -0.32
CDK4-208ENST00000551706 PVALBP20472 110 aaPredicted RBP13.03□□□□□ -0.32
CDK4-208ENST00000551706 NPPCP23582 126 aa13.03□□□□□ -0.32
CDK4-208ENST00000551706 TMEM14EPQ6UXP3 125 aa13.03□□□□□ -0.32
CDK4-208ENST00000551706 Q8N1Y9 231 aa13.03□□□□□ -0.32
CDK4-208ENST00000551706 NARS2Q96I59 477 aaKnown RBP13.03□□□□□ -0.32
CDK4-208ENST00000551706 SPAG8Q99932 426 aaPredicted RBP13.03□□□□□ -0.32
CDK4-208ENST00000551706 A0A1W2PS18 150 aa13.02□□□□□ -0.33
CDK4-208ENST00000551706 C7orf66A4D0T2 115 aa13.02□□□□□ -0.33
CDK4-208ENST00000551706 K7EPK0 472 aa13.02□□□□□ -0.33
CDK4-208ENST00000551706 TSPAN4O14817 238 aa13.02□□□□□ -0.33
CDK4-208ENST00000551706 SCAF4O95104 1147 aaKnown RBP13.02□□□□□ -0.33
CDK4-208ENST00000551706 CD81P60033 236 aa13.02□□□□□ -0.33
CDK4-208ENST00000551706 LSM5Q9Y4Y9 91 aaKnown RBP13.02□□□□□ -0.33
CDK4-208ENST00000551706 GOSR2O14653 212 aa13.01□□□□□ -0.33
CDK4-208ENST00000551706 SSNA1O43805 119 aa13.01□□□□□ -0.33
CDK4-208ENST00000551706 NHLRC4P0CG21 123 aaPredicted RBP13.01□□□□□ -0.33
CDK4-208ENST00000551706 CRYBB3P26998 211 aa13.01□□□□□ -0.33
CDK4-208ENST00000551706 CYCSP99999 105 aaKnown RBP13.01□□□□□ -0.33
CDK4-208ENST00000551706 IL15RAQ13261 267 aa13.01□□□□□ -0.33
CDK4-208ENST00000551706 ACOT7LQ6ZUV0 252 aa13.01□□□□□ -0.33
CDK4-208ENST00000551706 THAP8Q8NA92 274 aa13.01□□□□□ -0.33
CDK4-208ENST00000551706 OR10P1Q8NGE3 313 aa13.01□□□□□ -0.33
CDK4-208ENST00000551706 OR51G1Q8NGK1 321 aa13.01□□□□□ -0.33
CDK4-208ENST00000551706 TRGV9Q99603 122 aa13.01□□□□□ -0.33
CDK4-208ENST00000551706 NEURL2Q9BR09 285 aa13.01□□□□□ -0.33
CDK4-208ENST00000551706 VSIRQ9H7M9 311 aa13.01□□□□□ -0.33
CDK4-208ENST00000551706 SELENOKQ9Y6D0 94 aa13.01□□□□□ -0.33
CDK4-208ENST00000551706 LYSTQ99698 3801 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms