RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 RPS4Y1P22090 263 aaKnown RBP2.48□□□□□ -2.01
LIMA1-208ENST00000551691 PYCR1P32322 319 aa2.48□□□□□ -2.01
LIMA1-208ENST00000551691 POLR2IP36954 125 aaKnown RBP2.48□□□□□ -2.01
LIMA1-208ENST00000551691 ASIPP42127 132 aa2.48□□□□□ -2.01
LIMA1-208ENST00000551691 GABRA2P47869 451 aa2.48□□□□□ -2.01
LIMA1-208ENST00000551691 LGALS7P47929 136 aa2.48□□□□□ -2.01
LIMA1-208ENST00000551691 DYNLT3P51808 116 aa2.48□□□□□ -2.01
LIMA1-208ENST00000551691 ZNF133P52736 654 aaPredicted RBP2.48□□□□□ -2.01
LIMA1-208ENST00000551691 CEBPGP53567 150 aa2.48□□□□□ -2.01
LIMA1-208ENST00000551691 ESRRGP62508 458 aa2.48□□□□□ -2.01
LIMA1-208ENST00000551691 BAXQ07812 192 aa2.48□□□□□ -2.01
LIMA1-208ENST00000551691 UAP1Q16222 522 aaPredicted RBP2.48□□□□□ -2.01
LIMA1-208ENST00000551691 DEFB116Q30KQ4 102 aa2.48□□□□□ -2.01
LIMA1-208ENST00000551691 OGFRL1Q5TC84 451 aaPredicted RBP2.48□□□□□ -2.01
LIMA1-208ENST00000551691 KDM4DQ6B0I6 523 aa2.48□□□□□ -2.01
LIMA1-208ENST00000551691 C8orf74Q6P047 294 aa2.48□□□□□ -2.01
LIMA1-208ENST00000551691 SLC36A1Q7Z2H8 476 aa2.48□□□□□ -2.01
LIMA1-208ENST00000551691 OR5L1Q8NGL2 311 aa2.48□□□□□ -2.01
LIMA1-208ENST00000551691 OR1L1Q8NH94 360 aa2.48□□□□□ -2.01
LIMA1-208ENST00000551691 YIPF6Q96EC8 236 aa2.48□□□□□ -2.01
LIMA1-208ENST00000551691 YPEL4Q96NS1 127 aa2.48□□□□□ -2.01
LIMA1-208ENST00000551691 CCDC115Q96NT0 180 aa2.48□□□□□ -2.01
LIMA1-208ENST00000551691 WFDC1Q9HC57 220 aa2.48□□□□□ -2.01
LIMA1-208ENST00000551691 PLEKHJ1Q9NW61 149 aa2.48□□□□□ -2.01
LIMA1-208ENST00000551691 FAM206AQ9NX38 181 aa2.48□□□□□ -2.01
LIMA1-208ENST00000551691 NAGKQ9UJ70 344 aa2.48□□□□□ -2.01
LIMA1-208ENST00000551691 ANGPT4Q9Y264 503 aa2.48□□□□□ -2.01
LIMA1-208ENST00000551691 FIS1Q9Y3D6 152 aa2.48□□□□□ -2.01
LIMA1-208ENST00000551691 KIF25-AS1Q9Y6Z4 181 aa2.48□□□□□ -2.01
LIMA1-208ENST00000551691 A0A096LPI6 279 aa2.47□□□□□ -2.01
LIMA1-208ENST00000551691 IGHV7-4-1A0A0J9YVY3 117 aa2.47□□□□□ -2.01
LIMA1-208ENST00000551691 LOC389332A0A1B0GUA5 103 aa2.47□□□□□ -2.01
LIMA1-208ENST00000551691 A0A1B0GVX0 72 aa2.47□□□□□ -2.01
LIMA1-208ENST00000551691 F5H5K5 113 aa2.47□□□□□ -2.01
LIMA1-208ENST00000551691 RBFOX2O43251 390 aaKnown RBP eCLIP2.47□□□□□ -2.01
LIMA1-208ENST00000551691 COX7A2P2O60397 106 aa2.47□□□□□ -2.01
LIMA1-208ENST00000551691 MED6O75586 246 aa2.47□□□□□ -2.01
LIMA1-208ENST00000551691 HLA-DQA1P01909 254 aa2.47□□□□□ -2.01
LIMA1-208ENST00000551691 DBIP07108 87 aaKnown RBP2.47□□□□□ -2.01
LIMA1-208ENST00000551691 GUSBP08236 651 aa2.47□□□□□ -2.01
LIMA1-208ENST00000551691 CST2P09228 141 aa2.47□□□□□ -2.01
LIMA1-208ENST00000551691 RBP1P09455 135 aa2.47□□□□□ -2.01
LIMA1-208ENST00000551691 CD7P09564 240 aa2.47□□□□□ -2.01
LIMA1-208ENST00000551691 PIPP12273 146 aaPredicted RBP2.47□□□□□ -2.01
LIMA1-208ENST00000551691 MUC1P15941 1255 aaPredicted RBP2.47□□□□□ -2.01
LIMA1-208ENST00000551691 HIST1H1CP16403 213 aaKnown RBP2.47□□□□□ -2.01
LIMA1-208ENST00000551691 CELP19835 753 aa2.47□□□□□ -2.01
LIMA1-208ENST00000551691 HLA-DMAP28067 261 aa2.47□□□□□ -2.01
LIMA1-208ENST00000551691 OR10A3P58181 314 aa2.47□□□□□ -2.01
LIMA1-208ENST00000551691 RPL38P63173 70 aaKnown RBP2.47□□□□□ -2.01
LIMA1-208ENST00000551691 MRPS15P82914 257 aaKnown RBP2.47□□□□□ -2.01
LIMA1-208ENST00000551691 ZNF616Q08AN1 781 aa2.47□□□□□ -2.01
LIMA1-208ENST00000551691 C2orf83Q53S99 150 aa2.47□□□□□ -2.01
LIMA1-208ENST00000551691 TEX30Q5JUR7 227 aa2.47□□□□□ -2.01
LIMA1-208ENST00000551691 C10orf128Q5T292 105 aa2.47□□□□□ -2.01
LIMA1-208ENST00000551691 NXNL2Q5VZ03 156 aa2.47□□□□□ -2.01
LIMA1-208ENST00000551691 LPCAT4Q643R3 524 aa2.47□□□□□ -2.01
LIMA1-208ENST00000551691 SLC16A13Q7RTY0 426 aa2.47□□□□□ -2.01
LIMA1-208ENST00000551691 LYPD1Q8N2G4 141 aa2.47□□□□□ -2.01
LIMA1-208ENST00000551691 OR4P4Q8NGL7 312 aa2.47□□□□□ -2.01
LIMA1-208ENST00000551691 OR5H2Q8NGV7 314 aa2.47□□□□□ -2.01
LIMA1-208ENST00000551691 OR2T27Q8NH04 317 aa2.47□□□□□ -2.01
LIMA1-208ENST00000551691 OR5J2Q8NH18 312 aa2.47□□□□□ -2.01
LIMA1-208ENST00000551691 DTD1Q8TEA8 209 aa2.47□□□□□ -2.01
LIMA1-208ENST00000551691 C4orf3Q8WVX3 66 aa2.47□□□□□ -2.01
LIMA1-208ENST00000551691 FMC1Q96HJ9 113 aa2.47□□□□□ -2.01
LIMA1-208ENST00000551691 NARS2Q96I59 477 aaKnown RBP2.47□□□□□ -2.01
LIMA1-208ENST00000551691 ZNF414Q96IQ9 312 aa2.47□□□□□ -2.01
LIMA1-208ENST00000551691 FAM210AQ96ND0 272 aa2.47□□□□□ -2.01
LIMA1-208ENST00000551691 OR4C12Q96R67 309 aa2.47□□□□□ -2.01
LIMA1-208ENST00000551691 MARVELD1Q9BSK0 173 aa2.47□□□□□ -2.01
LIMA1-208ENST00000551691 TMEM208Q9BTX3 173 aa2.47□□□□□ -2.01
LIMA1-208ENST00000551691 C1orf50Q9BV19 199 aa2.47□□□□□ -2.01
LIMA1-208ENST00000551691 SAMD10Q9BYL1 202 aa2.47□□□□□ -2.01
LIMA1-208ENST00000551691 MRPS26Q9BYN8 205 aaKnown RBP2.47□□□□□ -2.01
LIMA1-208ENST00000551691 TXNIPQ9H3M7 391 aa2.47□□□□□ -2.01
LIMA1-208ENST00000551691 PARP11Q9NR21 331 aa2.47□□□□□ -2.01
LIMA1-208ENST00000551691 HHLA2Q9UM44 414 aa2.47□□□□□ -2.01
LIMA1-208ENST00000551691 ZNF443Q9Y2A4 671 aaPredicted RBP2.47□□□□□ -2.01
LIMA1-208ENST00000551691 TBL2Q9Y4P3 447 aaKnown RBP2.47□□□□□ -2.01
LIMA1-208ENST00000551691 IGLV4-69A0A075B6H9 119 aa2.46□□□□□ -2.02
LIMA1-208ENST00000551691 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.46□□□□□ -2.02
LIMA1-208ENST00000551691 IGKV1D-17A0A075B6S4 117 aa2.46□□□□□ -2.02
LIMA1-208ENST00000551691 A0A096LNJ9 63 aa2.46□□□□□ -2.02
LIMA1-208ENST00000551691 LOC102724200A0A096LPH7 203 aaPredicted RBP2.46□□□□□ -2.02
LIMA1-208ENST00000551691 A0A0U1RQV1 116 aa2.46□□□□□ -2.02
LIMA1-208ENST00000551691 A8MWL6 223 aa2.46□□□□□ -2.02
LIMA1-208ENST00000551691 KLLNB2CW77 178 aa2.46□□□□□ -2.02
LIMA1-208ENST00000551691 H0YJW9 148 aa2.46□□□□□ -2.02
LIMA1-208ENST00000551691 KPNA4O00629 521 aaPredicted RBP2.46□□□□□ -2.02
LIMA1-208ENST00000551691 RER1O15258 196 aa2.46□□□□□ -2.02
LIMA1-208ENST00000551691 TPST1O60507 370 aa2.46□□□□□ -2.02
LIMA1-208ENST00000551691 IGLV1-51P01701 117 aa2.46□□□□□ -2.02
LIMA1-208ENST00000551691 IGHG2P01859 326 aa2.46□□□□□ -2.02
LIMA1-208ENST00000551691 HLA-AP01891 365 aaKnown RBP2.46□□□□□ -2.02
LIMA1-208ENST00000551691 HLA-DQB1P01920 261 aa2.46□□□□□ -2.02
LIMA1-208ENST00000551691 TLX1NBP0CAT3 122 aa2.46□□□□□ -2.02
LIMA1-208ENST00000551691 PSG2P11465 335 aa2.46□□□□□ -2.02
LIMA1-208ENST00000551691 IL3RAP26951 378 aa2.46□□□□□ -2.02
LIMA1-208ENST00000551691 TSPOP30536 169 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms