RNA–Protein interactions for RNA: ENST00000550755.5

LETMD1-226, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 552 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-226ENST00000550755 ZNF222Q9UK12 451 aa3.26□□□□□ -1.89
LETMD1-226ENST00000550755 SHANK3Q9BYB0 1731 aa3.26□□□□□ -1.89
LETMD1-226ENST00000550755 BCL9O00512 1426 aa3.26□□□□□ -1.89
LETMD1-226ENST00000550755 RTL9Q8NET4 1388 aa3.25□□□□□ -1.89
LETMD1-226ENST00000550755 MED23Q9ULK4 1368 aa3.25□□□□□ -1.89
LETMD1-226ENST00000550755 NUP210Q8TEM1 1887 aaPredicted RBP3.25□□□□□ -1.89
LETMD1-226ENST00000550755 C1orf167Q5SNV9 1468 aa3.25□□□□□ -1.89
LETMD1-226ENST00000550755 PXDNQ92626 1479 aa3.25□□□□□ -1.89
LETMD1-226ENST00000550755 IGHV3-21A0A0B4J1V1 117 aa3.25□□□□□ -1.89
LETMD1-226ENST00000550755 TRAV41A0A0B4J266 112 aa3.25□□□□□ -1.89
LETMD1-226ENST00000550755 TRDV1A0A1B0GX56 115 aa3.25□□□□□ -1.89
LETMD1-226ENST00000550755 I3L521 148 aa3.25□□□□□ -1.89
LETMD1-226ENST00000550755 IFNA10P01566 189 aa3.25□□□□□ -1.89
LETMD1-226ENST00000550755 OR5AC1P0C628 307 aa3.25□□□□□ -1.89
LETMD1-226ENST00000550755 BCL2P10415 239 aa3.25□□□□□ -1.89
LETMD1-226ENST00000550755 PTHLHP12272 177 aa3.25□□□□□ -1.89
LETMD1-226ENST00000550755 SRIP30626 198 aa3.25□□□□□ -1.89
LETMD1-226ENST00000550755 S100A11P31949 105 aa3.25□□□□□ -1.89
LETMD1-226ENST00000550755 CCR2P41597 374 aa3.25□□□□□ -1.89
LETMD1-226ENST00000550755 EVX1P49640 407 aa3.25□□□□□ -1.89
LETMD1-226ENST00000550755 RRAS2P62070 204 aaPredicted RBP3.25□□□□□ -1.89
LETMD1-226ENST00000550755 SP6Q3SY56 376 aa3.25□□□□□ -1.89
LETMD1-226ENST00000550755 KTN1-AS1Q86SY8 53 aa3.25□□□□□ -1.89
LETMD1-226ENST00000550755 PACRGLQ8N7B6 248 aa3.25□□□□□ -1.89
LETMD1-226ENST00000550755 DAND5Q8N907 189 aa3.25□□□□□ -1.89
LETMD1-226ENST00000550755 ISOC1Q96CN7 298 aa3.25□□□□□ -1.89
LETMD1-226ENST00000550755 TM2D3Q9BRN9 247 aa3.25□□□□□ -1.89
LETMD1-226ENST00000550755 SMIM3Q9BZL3 60 aa3.25□□□□□ -1.89
LETMD1-226ENST00000550755 FAM60AQ9NP50 221 aa3.25□□□□□ -1.89
LETMD1-226ENST00000550755 NUP188Q5SRE5 1749 aa3.24□□□□□ -1.89
LETMD1-226ENST00000550755 DOCK8Q8NF50 2099 aa3.24□□□□□ -1.89
LETMD1-226ENST00000550755 AFDNP55196 1824 aaKnown RBP3.24□□□□□ -1.89
LETMD1-226ENST00000550755 WNK3Q9BYP7 1800 aa3.24□□□□□ -1.89
LETMD1-226ENST00000550755 DOCK4Q8N1I0 1966 aa3.24□□□□□ -1.89
LETMD1-226ENST00000550755 NHSL1Q5SYE7 1610 aa3.24□□□□□ -1.89
LETMD1-226ENST00000550755 TRAV38-1A0A0B4J264 116 aa3.24□□□□□ -1.89
LETMD1-226ENST00000550755 IGHV1-3A0A0C4DH29 117 aa3.24□□□□□ -1.89
LETMD1-226ENST00000550755 A0A1B0GW54 56 aa3.24□□□□□ -1.89
LETMD1-226ENST00000550755 LEUTXA8MZ59 168 aa3.24□□□□□ -1.89
LETMD1-226ENST00000550755 FAM25AB3EWG3 89 aa3.24□□□□□ -1.89
LETMD1-226ENST00000550755 FAM25CB3EWG5 89 aa3.24□□□□□ -1.89
LETMD1-226ENST00000550755 FAM25GB3EWG6 89 aa3.24□□□□□ -1.89
LETMD1-226ENST00000550755 C9JAW5 83 aa3.24□□□□□ -1.89
LETMD1-226ENST00000550755 UBE2L6O14933 153 aa3.24□□□□□ -1.89
LETMD1-226ENST00000550755 ZNF324O75467 553 aaPredicted RBP3.24□□□□□ -1.89
LETMD1-226ENST00000550755 TNFSF15O95150 251 aa3.24□□□□□ -1.89
LETMD1-226ENST00000550755 OR2H2O95918 312 aa3.24□□□□□ -1.89
LETMD1-226ENST00000550755 LINC00869P0C866 280 aa3.24□□□□□ -1.89
LETMD1-226ENST00000550755 IL1RNP18510 177 aa3.24□□□□□ -1.89
LETMD1-226ENST00000550755 HIST1H2BOP23527 126 aa3.24□□□□□ -1.89
LETMD1-226ENST00000550755 CASP1P29466 404 aa3.24□□□□□ -1.89
LETMD1-226ENST00000550755 HIST1H2BBP33778 126 aa3.24□□□□□ -1.89
LETMD1-226ENST00000550755 CXCL12P48061 93 aa3.24□□□□□ -1.89
LETMD1-226ENST00000550755 HIST1H2BDP58876 126 aa3.24□□□□□ -1.89
LETMD1-226ENST00000550755 HIST1H2BCP62807 126 aa3.24□□□□□ -1.89
LETMD1-226ENST00000550755 HIST1H1AQ02539 215 aaPredicted RBP3.24□□□□□ -1.89
LETMD1-226ENST00000550755 EBI3Q14213 229 aa3.24□□□□□ -1.89
LETMD1-226ENST00000550755 HIST2H2BEQ16778 126 aa3.24□□□□□ -1.89
LETMD1-226ENST00000550755 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.24□□□□□ -1.89
LETMD1-226ENST00000550755 SSX8Q7RTT4 187 aa3.24□□□□□ -1.89
LETMD1-226ENST00000550755 TCTE3Q8IZS6 198 aa3.24□□□□□ -1.89
LETMD1-226ENST00000550755 H1FXQ92522 213 aaKnown RBP3.24□□□□□ -1.89
LETMD1-226ENST00000550755 HIST1H2BHQ93079 126 aa3.24□□□□□ -1.89
LETMD1-226ENST00000550755 RNASE6Q93091 150 aaKnown RBP3.24□□□□□ -1.89
LETMD1-226ENST00000550755 HIST1H2BNQ99877 126 aa3.24□□□□□ -1.89
LETMD1-226ENST00000550755 HIST1H2BMQ99879 126 aa3.24□□□□□ -1.89
LETMD1-226ENST00000550755 RTL8AQ9BWD3 113 aa3.24□□□□□ -1.89
LETMD1-226ENST00000550755 TP73-AS1Q9UF72 201 aa3.24□□□□□ -1.89
LETMD1-226ENST00000550755 HIGD1AQ9Y241 93 aa3.24□□□□□ -1.89
LETMD1-226ENST00000550755 PHLDA3Q9Y5J5 127 aa3.24□□□□□ -1.89
LETMD1-226ENST00000550755 TMEM14AQ9Y6G1 99 aa3.24□□□□□ -1.89
LETMD1-226ENST00000550755 ARFGEF2Q9Y6D5 1785 aa3.24□□□□□ -1.89
LETMD1-226ENST00000550755 NUP214P35658 2090 aaPredicted RBP3.24□□□□□ -1.89
LETMD1-226ENST00000550755 NUP210LQ5VU65 1888 aa3.24□□□□□ -1.89
LETMD1-226ENST00000550755 DSCAMO60469 2012 aa3.24□□□□□ -1.89
LETMD1-226ENST00000550755 PLCH1Q4KWH8 1693 aa3.24□□□□□ -1.89
LETMD1-226ENST00000550755 MEIKINA0A087WXM9 373 aa3.23□□□□□ -1.89
LETMD1-226ENST00000550755 IGKV1D-43A0A0B4J1Z2 117 aa3.23□□□□□ -1.89
LETMD1-226ENST00000550755 TRAV5A0A0B4J249 113 aa3.23□□□□□ -1.89
LETMD1-226ENST00000550755 H7BYZ3 331 aa3.23□□□□□ -1.89
LETMD1-226ENST00000550755 OVOL1O14753 267 aa3.23□□□□□ -1.89
LETMD1-226ENST00000550755 ZNF73O43830 326 aaPredicted RBP3.23□□□□□ -1.89
LETMD1-226ENST00000550755 NRASP01111 189 aa3.23□□□□□ -1.89
LETMD1-226ENST00000550755 HRASP01112 189 aa3.23□□□□□ -1.89
LETMD1-226ENST00000550755 KRASP01116 189 aa3.23□□□□□ -1.89
LETMD1-226ENST00000550755 IFNGP01579 166 aa3.23□□□□□ -1.89
LETMD1-226ENST00000550755 IGKV1-5P01602 117 aa3.23□□□□□ -1.89
LETMD1-226ENST00000550755 AKR1C2P52895 323 aa3.23□□□□□ -1.89
LETMD1-226ENST00000550755 KLF3P57682 345 aaPredicted RBP3.23□□□□□ -1.89
LETMD1-226ENST00000550755 TAS2R30P59541 319 aa3.23□□□□□ -1.89
LETMD1-226ENST00000550755 RPL30P62888 115 aaKnown RBP3.23□□□□□ -1.89
LETMD1-226ENST00000550755 CCL20P78556 96 aa3.23□□□□□ -1.89
LETMD1-226ENST00000550755 TJP1Q07157 1748 aa3.23□□□□□ -1.89
LETMD1-226ENST00000550755 NEDD8Q15843 81 aa3.23□□□□□ -1.89
LETMD1-226ENST00000550755 DNLZQ5SXM8 178 aa3.23□□□□□ -1.89
LETMD1-226ENST00000550755 FAM104BQ5XKR9 115 aa3.23□□□□□ -1.89
LETMD1-226ENST00000550755 TNS3Q68CZ2 1445 aa3.23□□□□□ -1.89
LETMD1-226ENST00000550755 RPL22L1Q6P5R6 122 aaKnown RBP3.23□□□□□ -1.89
LETMD1-226ENST00000550755 SLC25A34Q6PIV7 304 aa3.23□□□□□ -1.89
LETMD1-226ENST00000550755 RASL11AQ6T310 242 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms