RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 TMEM238C9JI98 176 aa2.45□□□□□ -2.02
LIMA1-205ENST00000550592 I3L521 148 aa2.45□□□□□ -2.02
LIMA1-205ENST00000550592 PLPP3O14495 311 aa2.45□□□□□ -2.02
LIMA1-205ENST00000550592 PHYHO14832 338 aa2.45□□□□□ -2.02
LIMA1-205ENST00000550592 CST4P01036 141 aa2.45□□□□□ -2.02
LIMA1-205ENST00000550592 IGHMP01871 453 aa2.45□□□□□ -2.02
LIMA1-205ENST00000550592 GUSBP08236 651 aa2.45□□□□□ -2.02
LIMA1-205ENST00000550592 IFI30P13284 250 aa2.45□□□□□ -2.02
LIMA1-205ENST00000550592 NQO2P16083 231 aa2.45□□□□□ -2.02
LIMA1-205ENST00000550592 CBR1P16152 277 aa2.45□□□□□ -2.02
LIMA1-205ENST00000550592 KCNJ3P48549 501 aa2.45□□□□□ -2.02
LIMA1-205ENST00000550592 ZNF140P52738 457 aaPredicted RBP2.45□□□□□ -2.02
LIMA1-205ENST00000550592 UBE2G2P60604 165 aa2.45□□□□□ -2.02
LIMA1-205ENST00000550592 CXCR4P61073 352 aa2.45□□□□□ -2.02
LIMA1-205ENST00000550592 ARF6P62330 175 aa2.45□□□□□ -2.02
LIMA1-205ENST00000550592 EBPQ15125 230 aaKnown RBP2.45□□□□□ -2.02
LIMA1-205ENST00000550592 UBE2NLQ5JXB2 153 aa2.45□□□□□ -2.02
LIMA1-205ENST00000550592 GLYATQ6IB77 296 aa2.45□□□□□ -2.02
LIMA1-205ENST00000550592 BRD3OSQ6XYD6 125 aa2.45□□□□□ -2.02
LIMA1-205ENST00000550592 GALNT10Q86SR1 603 aa2.45□□□□□ -2.02
LIMA1-205ENST00000550592 CALHM3Q86XJ0 350 aa2.45□□□□□ -2.02
LIMA1-205ENST00000550592 C10orf107Q8IVU9 208 aa2.45□□□□□ -2.02
LIMA1-205ENST00000550592 SELENOHQ8IZQ5 122 aaKnown RBP2.45□□□□□ -2.02
LIMA1-205ENST00000550592 C4orf33Q8N1A6 199 aa2.45□□□□□ -2.02
LIMA1-205ENST00000550592 OR8G5Q8NG78 346 aa2.45□□□□□ -2.02
LIMA1-205ENST00000550592 OR1M1Q8NGA1 313 aa2.45□□□□□ -2.02
LIMA1-205ENST00000550592 OR5D18Q8NGL1 313 aa2.45□□□□□ -2.02
LIMA1-205ENST00000550592 OR4C13Q8NGP0 309 aa2.45□□□□□ -2.02
LIMA1-205ENST00000550592 TMEM239Q8WW34 195 aa2.45□□□□□ -2.02
LIMA1-205ENST00000550592 CNBD2Q96M20 576 aa2.45□□□□□ -2.02
LIMA1-205ENST00000550592 ZNF75AQ96N20 296 aa2.45□□□□□ -2.02
LIMA1-205ENST00000550592 C7orf50Q9BRJ6 194 aaKnown RBP2.45□□□□□ -2.02
LIMA1-205ENST00000550592 C2orf88Q9BSF0 95 aa2.45□□□□□ -2.02
LIMA1-205ENST00000550592 TMBIM4Q9HC24 238 aa2.45□□□□□ -2.02
LIMA1-205ENST00000550592 RBM12B-AS1Q9P1G2 102 aa2.45□□□□□ -2.02
LIMA1-205ENST00000550592 ZNF492Q9P255 531 aa2.45□□□□□ -2.02
LIMA1-205ENST00000550592 NUBP2Q9Y5Y2 271 aa2.45□□□□□ -2.02
LIMA1-205ENST00000550592 ZNF780BQ9Y6R6 833 aa2.45□□□□□ -2.02
LIMA1-205ENST00000550592 SORL1Q92673 2214 aa2.45□□□□□ -2.02
LIMA1-205ENST00000550592 PLECQ15149 4684 aaKnown RBP2.44□□□□□ -2.02
LIMA1-205ENST00000550592 RBFOX3A6NFN3 312 aa2.44□□□□□ -2.02
LIMA1-205ENST00000550592 LEUTXA8MZ59 168 aa2.44□□□□□ -2.02
LIMA1-205ENST00000550592 CLDN25C9JDP6 229 aa2.44□□□□□ -2.02
LIMA1-205ENST00000550592 TRAPPC2LH3BP13 241 aa2.44□□□□□ -2.02
LIMA1-205ENST00000550592 M0R233 179 aa2.44□□□□□ -2.02
LIMA1-205ENST00000550592 SULT1C2O00338 296 aa2.44□□□□□ -2.02
LIMA1-205ENST00000550592 CCL22O00626 93 aa2.44□□□□□ -2.02
LIMA1-205ENST00000550592 OR1I1O60431 355 aa2.44□□□□□ -2.02
LIMA1-205ENST00000550592 SNAPC5O75971 98 aa2.44□□□□□ -2.02
LIMA1-205ENST00000550592 PSMG1O95456 288 aa2.44□□□□□ -2.02
LIMA1-205ENST00000550592 IFNGP01579 166 aa2.44□□□□□ -2.02
LIMA1-205ENST00000550592 CTXN2P0C2S0 81 aa2.44□□□□□ -2.02
LIMA1-205ENST00000550592 CECR9P0C854 216 aa2.44□□□□□ -2.02
LIMA1-205ENST00000550592 PRB4P10163 310 aaPredicted RBP2.44□□□□□ -2.02
LIMA1-205ENST00000550592 PTHLHP12272 177 aa2.44□□□□□ -2.02
LIMA1-205ENST00000550592 CD36P16671 472 aa2.44□□□□□ -2.02
LIMA1-205ENST00000550592 SPI1P17947 270 aa2.44□□□□□ -2.02
LIMA1-205ENST00000550592 PSMB6P28072 239 aa2.44□□□□□ -2.02
LIMA1-205ENST00000550592 ERP29P30040 261 aaKnown RBP2.44□□□□□ -2.02
LIMA1-205ENST00000550592 EVX1P49640 407 aa2.44□□□□□ -2.02
LIMA1-205ENST00000550592 RBP2P50120 134 aa2.44□□□□□ -2.02
LIMA1-205ENST00000550592 DEFA1P59665 94 aa2.44□□□□□ -2.02
LIMA1-205ENST00000550592 DEFA3P59666 94 aa2.44□□□□□ -2.02
LIMA1-205ENST00000550592 GUK1Q16774 197 aa2.44□□□□□ -2.02
LIMA1-205ENST00000550592 AKIRIN2Q53H80 203 aa2.44□□□□□ -2.02
LIMA1-205ENST00000550592 HBMQ6B0K9 141 aa2.44□□□□□ -2.02
LIMA1-205ENST00000550592 IZUMO2Q6UXV1 221 aa2.44□□□□□ -2.02
LIMA1-205ENST00000550592 TMEM144Q7Z5S9 345 aa2.44□□□□□ -2.02
LIMA1-205ENST00000550592 C17orf78Q8N4C9 275 aa2.44□□□□□ -2.02
LIMA1-205ENST00000550592 MMGT1Q8N4V1 131 aa2.44□□□□□ -2.02
LIMA1-205ENST00000550592 OR2V1Q8NHB1 315 aa2.44□□□□□ -2.02
LIMA1-205ENST00000550592 NEK7Q8TDX7 302 aa2.44□□□□□ -2.02
LIMA1-205ENST00000550592 CCL17Q92583 94 aa2.44□□□□□ -2.02
LIMA1-205ENST00000550592 GTF2H4Q92759 462 aa2.44□□□□□ -2.02
LIMA1-205ENST00000550592 RBPMSQ93062 196 aaKnown RBP2.44□□□□□ -2.02
LIMA1-205ENST00000550592 TMEM203Q969S6 136 aa2.44□□□□□ -2.02
LIMA1-205ENST00000550592 PPWD1Q96BP3 646 aaKnown RBP2.44□□□□□ -2.02
LIMA1-205ENST00000550592 FMC1Q96HJ9 113 aa2.44□□□□□ -2.02
LIMA1-205ENST00000550592 AIF1LQ9BQI0 150 aa2.44□□□□□ -2.02
LIMA1-205ENST00000550592 PARD6GQ9BYG4 376 aaPredicted RBP2.44□□□□□ -2.02
LIMA1-205ENST00000550592 DSN1Q9H410 356 aa2.44□□□□□ -2.02
LIMA1-205ENST00000550592 TMEM138Q9NPI0 162 aa2.44□□□□□ -2.02
LIMA1-205ENST00000550592 COPZ2Q9P299 210 aa2.44□□□□□ -2.02
LIMA1-205ENST00000550592 OR5V1Q9UGF6 321 aa2.44□□□□□ -2.02
LIMA1-205ENST00000550592 NAGKQ9UJ70 344 aa2.44□□□□□ -2.02
LIMA1-205ENST00000550592 ZNF706Q9Y5V0 76 aaPredicted RBP2.44□□□□□ -2.02
LIMA1-205ENST00000550592 IGKV1OR2-108A0A075B7D4 117 aa2.43□□□□□ -2.02
LIMA1-205ENST00000550592 IGKV2-24A0A0C4DH68 120 aa2.43□□□□□ -2.02
LIMA1-205ENST00000550592 A0A1B0GV72 72 aa2.43□□□□□ -2.02
LIMA1-205ENST00000550592 C4orf51C9J302 202 aa2.43□□□□□ -2.02
LIMA1-205ENST00000550592 TSTD3H0UI37 97 aa2.43□□□□□ -2.02
LIMA1-205ENST00000550592 H3BSA7 217 aa2.43□□□□□ -2.02
LIMA1-205ENST00000550592 BHLHE40O14503 412 aa2.43□□□□□ -2.02
LIMA1-205ENST00000550592 SCN2BO60939 215 aa2.43□□□□□ -2.02
LIMA1-205ENST00000550592 DEDDO75618 318 aa2.43□□□□□ -2.02
LIMA1-205ENST00000550592 IFNA21P01568 189 aa2.43□□□□□ -2.02
LIMA1-205ENST00000550592 TRAPPC2P0DI81 140 aa2.43□□□□□ -2.02
LIMA1-205ENST00000550592 TRAPPC2BP0DI82 140 aa2.43□□□□□ -2.02
LIMA1-205ENST00000550592 HIST1H1TP22492 207 aaPredicted RBP2.43□□□□□ -2.02
LIMA1-205ENST00000550592 SERPINB10P48595 397 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms