RNA–Protein interactions for RNA: ENST00000550589.1

CCDC59-204, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-204ENST00000550589 PDZD11Q5EBL8 140 aa3.5□□□□□ -1.85
CCDC59-204ENST00000550589 PYY3Q5JQD4 70 aa3.5□□□□□ -1.85
CCDC59-204ENST00000550589 IBA57Q5T440 356 aaKnown RBP3.5□□□□□ -1.85
CCDC59-204ENST00000550589 LYPD2Q6UXB3 125 aa3.5□□□□□ -1.85
CCDC59-204ENST00000550589 C1orf122Q6ZSJ8 110 aa3.5□□□□□ -1.85
CCDC59-204ENST00000550589 LINC00305Q7Z4B0 112 aa3.5□□□□□ -1.85
CCDC59-204ENST00000550589 THAP8Q8NA92 274 aa3.5□□□□□ -1.85
CCDC59-204ENST00000550589 TMEM116Q8NCL8 245 aa3.5□□□□□ -1.85
CCDC59-204ENST00000550589 OR5AU1Q8NGC0 362 aa3.5□□□□□ -1.85
CCDC59-204ENST00000550589 OR10W1Q8NGF6 305 aa3.5□□□□□ -1.85
CCDC59-204ENST00000550589 NPIPB3Q92617 1050 aa3.5□□□□□ -1.85
CCDC59-204ENST00000550589 HIST1H2BLQ99880 126 aa3.5□□□□□ -1.85
CCDC59-204ENST00000550589 GNB1LQ9BYB4 327 aa3.5□□□□□ -1.85
CCDC59-204ENST00000550589 DCAF16Q9NXF7 216 aa3.5□□□□□ -1.85
CCDC59-204ENST00000550589 THYN1Q9P016 225 aa3.5□□□□□ -1.85
CCDC59-204ENST00000550589 DPM3Q9P2X0 92 aa3.5□□□□□ -1.85
CCDC59-204ENST00000550589 YTHDF2Q9Y5A9 579 aaKnown RBP3.5□□□□□ -1.85
CCDC59-204ENST00000550589 RIF1Q5UIP0 2472 aaKnown RBP3.5□□□□□ -1.85
CCDC59-204ENST00000550589 FAM90A27PA6NNH2 459 aa3.5□□□□□ -1.85
CCDC59-204ENST00000550589 OOSP1A8MZH6 123 aa3.5□□□□□ -1.85
CCDC59-204ENST00000550589 K7EQM0 130 aa3.5□□□□□ -1.85
CCDC59-204ENST00000550589 FCN1O00602 326 aa3.5□□□□□ -1.85
CCDC59-204ENST00000550589 HYPMO75409 117 aa3.5□□□□□ -1.85
CCDC59-204ENST00000550589 FOXH1O75593 365 aa3.5□□□□□ -1.85
CCDC59-204ENST00000550589 IGLV1-47P01700 117 aa3.5□□□□□ -1.85
CCDC59-204ENST00000550589 IGLV2-23P01705 113 aa3.5□□□□□ -1.85
CCDC59-204ENST00000550589 HLA-DQA1P01909 254 aa3.5□□□□□ -1.85
CCDC59-204ENST00000550589 MGST1P10620 155 aaKnown RBP3.5□□□□□ -1.85
CCDC59-204ENST00000550589 LGALS4P56470 323 aa3.5□□□□□ -1.85
CCDC59-204ENST00000550589 TPPP2P59282 170 aa3.5□□□□□ -1.85
CCDC59-204ENST00000550589 JOSD1Q15040 202 aaPredicted RBP3.5□□□□□ -1.85
CCDC59-204ENST00000550589 CENPWQ5EE01 88 aa3.5□□□□□ -1.85
CCDC59-204ENST00000550589 FAM162BQ5T6X4 162 aa3.5□□□□□ -1.85
CCDC59-204ENST00000550589 OR2T6Q8NHC8 308 aa3.5□□□□□ -1.85
CCDC59-204ENST00000550589 LINC01560Q8TB33 94 aa3.5□□□□□ -1.85
CCDC59-204ENST00000550589 NOL4LQ96MY1 436 aaPredicted RBP3.5□□□□□ -1.85
CCDC59-204ENST00000550589 CLUHP3Q96NS8 147 aa3.5□□□□□ -1.85
CCDC59-204ENST00000550589 RASL11BQ9BPW5 248 aa3.5□□□□□ -1.85
CCDC59-204ENST00000550589 DERL1Q9BUN8 251 aa3.5□□□□□ -1.85
CCDC59-204ENST00000550589 ZNF331Q9NQX6 463 aaPredicted RBP3.5□□□□□ -1.85
CCDC59-204ENST00000550589 ZNF355PQ9NSJ1 428 aa3.5□□□□□ -1.85
CCDC59-204ENST00000550589 SERTAD4Q9NUC0 356 aa3.5□□□□□ -1.85
CCDC59-204ENST00000550589 CTSZQ9UBR2 303 aa3.5□□□□□ -1.85
CCDC59-204ENST00000550589 SIGLEC9Q9Y336 463 aa3.5□□□□□ -1.85
CCDC59-204ENST00000550589 ASPMQ8IZT6 3477 aa3.49□□□□□ -1.85
CCDC59-204ENST00000550589 MAP1BP46821 2468 aaKnown RBP3.49□□□□□ -1.85
CCDC59-204ENST00000550589 IGKV1OR2-108A0A075B7D4 117 aa3.49□□□□□ -1.85
CCDC59-204ENST00000550589 A0A1W2PPI3 338 aa3.49□□□□□ -1.85
CCDC59-204ENST00000550589 ZNF705GA8MUZ8 300 aaPredicted RBP3.49□□□□□ -1.85
CCDC59-204ENST00000550589 ZNF561-AS1K7EIQ3 104 aa3.49□□□□□ -1.85
CCDC59-204ENST00000550589 PHOX2AO14813 284 aa3.49□□□□□ -1.85
CCDC59-204ENST00000550589 GATCO43716 136 aaKnown RBP3.49□□□□□ -1.85
CCDC59-204ENST00000550589 IGHV2-70P01814 119 aa3.49□□□□□ -1.85
CCDC59-204ENST00000550589 CRYGCP07315 174 aa3.49□□□□□ -1.85
CCDC59-204ENST00000550589 CRISP2P16562 243 aa3.49□□□□□ -1.85
CCDC59-204ENST00000550589 ORM2P19652 201 aa3.49□□□□□ -1.85
CCDC59-204ENST00000550589 PLP1P60201 277 aa3.49□□□□□ -1.85
CCDC59-204ENST00000550589 CX3CL1P78423 397 aa3.49□□□□□ -1.85
CCDC59-204ENST00000550589 WT1-ASQ06250 92 aa3.49□□□□□ -1.85
CCDC59-204ENST00000550589 MMDQ15546 238 aa3.49□□□□□ -1.85
CCDC59-204ENST00000550589 CLEC12BQ2HXU8 276 aa3.49□□□□□ -1.85
CCDC59-204ENST00000550589 LBHQ53QV2 105 aaPredicted RBP3.49□□□□□ -1.85
CCDC59-204ENST00000550589 TM4SF20Q53R12 229 aa3.49□□□□□ -1.85
CCDC59-204ENST00000550589 FAM231DQ6ZW35 169 aa3.49□□□□□ -1.85
CCDC59-204ENST00000550589 BAGE3Q86Y29 109 aa3.49□□□□□ -1.85
CCDC59-204ENST00000550589 BAGE2Q86Y30 109 aa3.49□□□□□ -1.85
CCDC59-204ENST00000550589 OR11H6Q8NGC7 330 aa3.49□□□□□ -1.85
CCDC59-204ENST00000550589 OR1B1Q8NGR6 318 aa3.49□□□□□ -1.85
CCDC59-204ENST00000550589 CMTM2Q8TAZ6 248 aa3.49□□□□□ -1.85
CCDC59-204ENST00000550589 MBD6Q96DN6 1003 aa3.49□□□□□ -1.85
CCDC59-204ENST00000550589 DAZAP1Q96EP5 407 aaKnown RBP3.49□□□□□ -1.85
CCDC59-204ENST00000550589 ELOVL1Q9BW60 279 aa3.49□□□□□ -1.85
CCDC59-204ENST00000550589 SSBP3Q9BWW4 388 aaPredicted RBP3.49□□□□□ -1.85
CCDC59-204ENST00000550589 C1RLQ9NZP8 487 aa3.49□□□□□ -1.85
CCDC59-204ENST00000550589 ONECUT1Q9UBC0 465 aa3.49□□□□□ -1.85
CCDC59-204ENST00000550589 F11RQ9Y624 299 aaKnown RBP3.49□□□□□ -1.85
CCDC59-204ENST00000550589 CADP27708 2225 aa3.49□□□□□ -1.85
CCDC59-204ENST00000550589 RP1L1Q8IWN7 2480 aaPredicted RBP3.49□□□□□ -1.85
CCDC59-204ENST00000550589 LOC400499M0QZD8 3231 aa3.49□□□□□ -1.85
CCDC59-204ENST00000550589 TRBV20OR9-2A0A075B6H5 130 aa3.49□□□□□ -1.85
CCDC59-204ENST00000550589 LOC105371242A0A075B767 164 aa3.49□□□□□ -1.85
CCDC59-204ENST00000550589 SNURFLB1AK76 121 aa3.49□□□□□ -1.85
CCDC59-204ENST00000550589 MOSP00540 346 aa3.49□□□□□ -1.85
CCDC59-204ENST00000550589 NBEAP1P0C6P0 100 aa3.49□□□□□ -1.85
CCDC59-204ENST00000550589 MYOD1P15172 320 aa3.49□□□□□ -1.85
CCDC59-204ENST00000550589 GATA2P23769 480 aaPredicted RBP3.49□□□□□ -1.85
CCDC59-204ENST00000550589 PRTN3P24158 256 aa3.49□□□□□ -1.85
CCDC59-204ENST00000550589 COL8A2P25067 703 aa3.49□□□□□ -1.85
CCDC59-204ENST00000550589 CTAG1AP78358 180 aa3.49□□□□□ -1.85
CCDC59-204ENST00000550589 USF2Q15853 346 aaPredicted RBP3.49□□□□□ -1.85
CCDC59-204ENST00000550589 OR10J3Q5JRS4 329 aa3.49□□□□□ -1.85
CCDC59-204ENST00000550589 UTF1Q5T230 341 aa3.49□□□□□ -1.85
CCDC59-204ENST00000550589 MINOS1Q5TGZ0 78 aa3.49□□□□□ -1.85
CCDC59-204ENST00000550589 SPATA31B1PQ5VZV4 182 aa3.49□□□□□ -1.85
CCDC59-204ENST00000550589 CYB5R2Q6BCY4 276 aa3.49□□□□□ -1.85
CCDC59-204ENST00000550589 PVRIGQ6DKI7 326 aa3.49□□□□□ -1.85
CCDC59-204ENST00000550589 HCP5Q6MZN7 132 aa3.49□□□□□ -1.85
CCDC59-204ENST00000550589 ZNF841Q6ZN19 808 aa3.49□□□□□ -1.85
CCDC59-204ENST00000550589 ATP5L2Q7Z4Y8 100 aa3.49□□□□□ -1.85
CCDC59-204ENST00000550589 LYPD1Q8N2G4 141 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms