RNA–Protein interactions for RNA: ENST00000550280.1

SMARCD1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-208ENST00000550280 FAM231AP0DMU4 169 aa8.25□□□□□ -1.09
SMARCD1-208ENST00000550280 FAM231CP0DMU5 169 aa8.25□□□□□ -1.09
SMARCD1-208ENST00000550280 PGAM2P15259 253 aa8.25□□□□□ -1.09
SMARCD1-208ENST00000550280 UCP1P25874 307 aa8.25□□□□□ -1.09
SMARCD1-208ENST00000550280 S100GP29377 79 aa8.25□□□□□ -1.09
SMARCD1-208ENST00000550280 RND2P52198 227 aa8.25□□□□□ -1.09
SMARCD1-208ENST00000550280 AKR1C2P52895 323 aa8.25□□□□□ -1.09
SMARCD1-208ENST00000550280 NCS1P62166 190 aa8.25□□□□□ -1.09
SMARCD1-208ENST00000550280 DHODHQ02127 395 aa8.25□□□□□ -1.09
SMARCD1-208ENST00000550280 LGALS9BQ3B8N2 356 aa8.25□□□□□ -1.09
SMARCD1-208ENST00000550280 RNASE12Q5GAN4 147 aaKnown RBP8.25□□□□□ -1.09
SMARCD1-208ENST00000550280 TMEM230Q96A57 120 aa8.25□□□□□ -1.09
SMARCD1-208ENST00000550280 PLA2G2EQ9NZK7 142 aa8.25□□□□□ -1.09
SMARCD1-208ENST00000550280 MUC4Q99102 2169 aa8.25□□□□□ -1.09
SMARCD1-208ENST00000550280 IGLV2-18A0A075B6J9 118 aa8.24□□□□□ -1.09
SMARCD1-208ENST00000550280 HPGDSO60760 199 aa8.24□□□□□ -1.09
SMARCD1-208ENST00000550280 HNRNPCP07910 306 aaKnown RBP eCLIP8.24□□□□□ -1.09
SMARCD1-208ENST00000550280 ZNF486Q96H40 463 aaPredicted RBP8.24□□□□□ -1.09
SMARCD1-208ENST00000550280 NDUFAF3Q9BU61 184 aa8.24□□□□□ -1.09
SMARCD1-208ENST00000550280 Q9H521 79 aa8.24□□□□□ -1.09
SMARCD1-208ENST00000550280 BUB3O43684 328 aa8.23□□□□□ -1.09
SMARCD1-208ENST00000550280 HLA-DRB4P13762 266 aa8.23□□□□□ -1.09
SMARCD1-208ENST00000550280 SUB1P53999 127 aaKnown RBP eCLIP8.23□□□□□ -1.09
SMARCD1-208ENST00000550280 YPEL3P61236 119 aaPredicted RBP8.23□□□□□ -1.09
SMARCD1-208ENST00000550280 OR13C8Q8NGS7 320 aa8.23□□□□□ -1.09
SMARCD1-208ENST00000550280 OR52I2Q8NH67 350 aa8.23□□□□□ -1.09
SMARCD1-208ENST00000550280 NEU1Q99519 415 aa8.23□□□□□ -1.09
SMARCD1-208ENST00000550280 HLA-DRB4X5D2U9 266 aa8.23□□□□□ -1.09
SMARCD1-208ENST00000550280 TRAV30A0A087WSZ9 112 aa8.22□□□□□ -1.09
SMARCD1-208ENST00000550280 IL4P05112 153 aa8.22□□□□□ -1.09
SMARCD1-208ENST00000550280 OR10J1P30954 320 aa8.22□□□□□ -1.09
SMARCD1-208ENST00000550280 FXYD7P58549 80 aa8.22□□□□□ -1.09
SMARCD1-208ENST00000550280 SPCS3P61009 180 aa8.22□□□□□ -1.09
SMARCD1-208ENST00000550280 VBP1P61758 197 aa8.22□□□□□ -1.09
SMARCD1-208ENST00000550280 TRIM16LQ309B1 348 aa8.22□□□□□ -1.09
SMARCD1-208ENST00000550280 C2orf83Q53S99 150 aa8.22□□□□□ -1.09
SMARCD1-208ENST00000550280 RNASE10Q5GAN6 216 aaKnown RBP8.22□□□□□ -1.09
SMARCD1-208ENST00000550280 ARRDC1Q8N5I2 433 aa8.22□□□□□ -1.09
SMARCD1-208ENST00000550280 ZNF709Q8N972 641 aa8.22□□□□□ -1.09
SMARCD1-208ENST00000550280 OR1S2Q8NGQ3 325 aa8.22□□□□□ -1.09
SMARCD1-208ENST00000550280 GLYATL2Q8WU03 294 aa8.22□□□□□ -1.09
SMARCD1-208ENST00000550280 GPR146Q96CH1 333 aa8.22□□□□□ -1.09
SMARCD1-208ENST00000550280 ABHD1Q96SE0 405 aa8.22□□□□□ -1.09
SMARCD1-208ENST00000550280 WDR12Q9GZL7 423 aaKnown RBP8.22□□□□□ -1.09
SMARCD1-208ENST00000550280 NRN1Q9NPD7 142 aa8.22□□□□□ -1.09
SMARCD1-208ENST00000550280 DNAH5Q8TE73 4624 aa8.22□□□□□ -1.09
SMARCD1-208ENST00000550280 SOCS3O14543 225 aa8.21□□□□□ -1.1
SMARCD1-208ENST00000550280 CDS2O95674 445 aa8.21□□□□□ -1.1
SMARCD1-208ENST00000550280 OR5AC1P0C628 307 aa8.21□□□□□ -1.1
SMARCD1-208ENST00000550280 HTR2BP41595 481 aa8.21□□□□□ -1.1
SMARCD1-208ENST00000550280 EMP1P54849 157 aa8.21□□□□□ -1.1
SMARCD1-208ENST00000550280 MEF2DQ14814 521 aa8.21□□□□□ -1.1
SMARCD1-208ENST00000550280 FAAP20Q6NZ36 180 aa8.21□□□□□ -1.1
SMARCD1-208ENST00000550280 SIGLEC15Q6ZMC9 328 aa8.21□□□□□ -1.1
SMARCD1-208ENST00000550280 SELENOHQ8IZQ5 122 aaKnown RBP8.21□□□□□ -1.1
SMARCD1-208ENST00000550280 C1orf158Q8N1D5 194 aa8.21□□□□□ -1.1
SMARCD1-208ENST00000550280 OR52E5Q8NH55 327 aa8.21□□□□□ -1.1
SMARCD1-208ENST00000550280 MARCH1Q8TCQ1 289 aa8.21□□□□□ -1.1
SMARCD1-208ENST00000550280 Q8WTZ3 238 aa8.21□□□□□ -1.1
SMARCD1-208ENST00000550280 NPIPB3Q92617 1050 aa8.21□□□□□ -1.1
SMARCD1-208ENST00000550280 NARS2Q96I59 477 aaKnown RBP8.21□□□□□ -1.1
SMARCD1-208ENST00000550280 RTBDNQ9BSG5 229 aaPredicted RBP8.21□□□□□ -1.1
SMARCD1-208ENST00000550280 PDCD10Q9BUL8 212 aa8.21□□□□□ -1.1
SMARCD1-208ENST00000550280 TMEM222Q9H0R3 208 aa8.21□□□□□ -1.1
SMARCD1-208ENST00000550280 SEPSECSQ9HD40 501 aaKnown RBP8.21□□□□□ -1.1
SMARCD1-208ENST00000550280 DKK2Q9UBU2 259 aa8.21□□□□□ -1.1
SMARCD1-208ENST00000550280 MTFP1Q9UDX5 166 aa8.21□□□□□ -1.1
SMARCD1-208ENST00000550280 SMIM31A0A1B0GVY4 71 aa8.2□□□□□ -1.1
SMARCD1-208ENST00000550280 TOMM40O96008 361 aa8.2□□□□□ -1.1
SMARCD1-208ENST00000550280 IGKV3-20P01619 116 aa8.2□□□□□ -1.1
SMARCD1-208ENST00000550280 PSG1P11464 419 aa8.2□□□□□ -1.1
SMARCD1-208ENST00000550280 SLC25A4P12235 298 aa8.2□□□□□ -1.1
SMARCD1-208ENST00000550280 NKX2-1P43699 371 aaPredicted RBP8.2□□□□□ -1.1
SMARCD1-208ENST00000550280 AP2S1P53680 142 aaPredicted RBP8.2□□□□□ -1.1
SMARCD1-208ENST00000550280 FAM222AQ5U5X8 452 aa8.2□□□□□ -1.1
SMARCD1-208ENST00000550280 SLC24A4Q8NFF2 622 aa8.2□□□□□ -1.1
SMARCD1-208ENST00000550280 OR51G1Q8NGK1 321 aa8.2□□□□□ -1.1
SMARCD1-208ENST00000550280 TERB2Q8NHR7 220 aa8.2□□□□□ -1.1
SMARCD1-208ENST00000550280 RNASEH2CQ8TDP1 164 aaKnown RBP8.2□□□□□ -1.1
SMARCD1-208ENST00000550280 RRNAD1Q96FB5 475 aaKnown RBP8.2□□□□□ -1.1
SMARCD1-208ENST00000550280 C17orf77Q96MU5 243 aa8.2□□□□□ -1.1
SMARCD1-208ENST00000550280 FUNDC2Q9BWH2 189 aa8.2□□□□□ -1.1
SMARCD1-208ENST00000550280 C1QTNF4Q9BXJ3 329 aa8.2□□□□□ -1.1
SMARCD1-208ENST00000550280 SLC35B3Q9H1N7 401 aa8.2□□□□□ -1.1
SMARCD1-208ENST00000550280 ENY2Q9NPA8 101 aa8.2□□□□□ -1.1
SMARCD1-208ENST00000550280 COPZ2Q9P299 210 aa8.2□□□□□ -1.1
SMARCD1-208ENST00000550280 CACNG5Q9UF02 275 aa8.2□□□□□ -1.1
SMARCD1-208ENST00000550280 NACAE9PAV3 2078 aa8.19□□□□□ -1.1
SMARCD1-208ENST00000550280 IGKV1D-37A0A075B6S9 117 aa8.19□□□□□ -1.1
SMARCD1-208ENST00000550280 IGHV3OR16-12A0A075B7B8 117 aa8.19□□□□□ -1.1
SMARCD1-208ENST00000550280 RPS10-NUDT3A0A1W2PQS6 291 aa8.19□□□□□ -1.1
SMARCD1-208ENST00000550280 F6UB75 175 aa8.19□□□□□ -1.1
SMARCD1-208ENST00000550280 SPART-AS1P0CW21 52 aa8.19□□□□□ -1.1
SMARCD1-208ENST00000550280 NPY1RP25929 384 aa8.19□□□□□ -1.1
SMARCD1-208ENST00000550280 EIF2B2P49770 351 aaKnown RBP8.19□□□□□ -1.1
SMARCD1-208ENST00000550280 NUTF2P61970 127 aaKnown RBP8.19□□□□□ -1.1
SMARCD1-208ENST00000550280 SNRPD3P62318 126 aaKnown RBP8.19□□□□□ -1.1
SMARCD1-208ENST00000550280 NMSQ5H8A3 153 aa8.19□□□□□ -1.1
SMARCD1-208ENST00000550280 CENPSQ8N2Z9 138 aa8.19□□□□□ -1.1
SMARCD1-208ENST00000550280 ACY3Q96HD9 319 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms