RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 SPINK9Q5DT21 86 aa7.04□□□□□ -1.28
TRAFD1-207ENST00000550051 ZNF705AQ6ZN79 300 aaPredicted RBP7.04□□□□□ -1.28
TRAFD1-207ENST00000550051 ZNF767PQ75MW2 155 aa7.04□□□□□ -1.28
TRAFD1-207ENST00000550051 GLMPQ8WWB7 406 aa7.04□□□□□ -1.28
TRAFD1-207ENST00000550051 ZNF705FA8MVS1 300 aaPredicted RBP7.03□□□□□ -1.28
TRAFD1-207ENST00000550051 ATG12O94817 140 aa7.03□□□□□ -1.28
TRAFD1-207ENST00000550051 ZNF705DP0CH99 300 aaPredicted RBP7.03□□□□□ -1.28
TRAFD1-207ENST00000550051 ZNF705BP0CI00 300 aaPredicted RBP7.03□□□□□ -1.28
TRAFD1-207ENST00000550051 RPS19P39019 145 aaKnown RBP7.03□□□□□ -1.28
TRAFD1-207ENST00000550051 OPRK1P41145 380 aa7.03□□□□□ -1.28
TRAFD1-207ENST00000550051 YPEL3P61236 119 aaPredicted RBP7.03□□□□□ -1.28
TRAFD1-207ENST00000550051 SNRPD3P62318 126 aaKnown RBP7.03□□□□□ -1.28
TRAFD1-207ENST00000550051 PSMG4Q5JS54 123 aa7.03□□□□□ -1.28
TRAFD1-207ENST00000550051 SOHLH1Q5JUK2 328 aa7.03□□□□□ -1.28
TRAFD1-207ENST00000550051 SLC35G3Q8N808 338 aa7.03□□□□□ -1.28
TRAFD1-207ENST00000550051 SAMD12Q8N8I0 201 aa7.03□□□□□ -1.28
TRAFD1-207ENST00000550051 Q8WTZ3 238 aa7.03□□□□□ -1.28
TRAFD1-207ENST00000550051 ZNF486Q96H40 463 aaPredicted RBP7.03□□□□□ -1.28
TRAFD1-207ENST00000550051 SCPEP1Q9HB40 452 aa7.03□□□□□ -1.28
TRAFD1-207ENST00000550051 XCL2Q9UBD3 114 aa7.03□□□□□ -1.28
TRAFD1-207ENST00000550051 FAM90A26D6RGX4 464 aa7.02□□□□□ -1.29
TRAFD1-207ENST00000550051 HNRNPCP07910 306 aaKnown RBP eCLIP7.02□□□□□ -1.29
TRAFD1-207ENST00000550051 IGLC1P0CG04 106 aa7.02□□□□□ -1.29
TRAFD1-207ENST00000550051 HOXA1P49639 335 aaPredicted RBP7.02□□□□□ -1.29
TRAFD1-207ENST00000550051 TIGITQ495A1 244 aa7.02□□□□□ -1.29
TRAFD1-207ENST00000550051 AARDQ4LEZ3 155 aa7.02□□□□□ -1.29
TRAFD1-207ENST00000550051 Q6ZRM9 215 aa7.02□□□□□ -1.29
TRAFD1-207ENST00000550051 OR1S2Q8NGQ3 325 aa7.02□□□□□ -1.29
TRAFD1-207ENST00000550051 CLUHP3Q96NS8 147 aa7.02□□□□□ -1.29
TRAFD1-207ENST00000550051 PDCD10Q9BUL8 212 aa7.02□□□□□ -1.29
TRAFD1-207ENST00000550051 NACAE9PAV3 2078 aa7.01□□□□□ -1.29
TRAFD1-207ENST00000550051 IGLV2-18A0A075B6J9 118 aa7.01□□□□□ -1.29
TRAFD1-207ENST00000550051 TEX48A0A1B0GUV7 120 aa7.01□□□□□ -1.29
TRAFD1-207ENST00000550051 SMIM31A0A1B0GVY4 71 aa7.01□□□□□ -1.29
TRAFD1-207ENST00000550051 RPS10-NUDT3A0A1W2PQS6 291 aa7.01□□□□□ -1.29
TRAFD1-207ENST00000550051 BUB3O43684 328 aa7.01□□□□□ -1.29
TRAFD1-207ENST00000550051 SLC25A4P12235 298 aa7.01□□□□□ -1.29
TRAFD1-207ENST00000550051 HLA-DRB4P13762 266 aa7.01□□□□□ -1.29
TRAFD1-207ENST00000550051 HTR2BP41595 481 aa7.01□□□□□ -1.29
TRAFD1-207ENST00000550051 NKX2-1P43699 371 aaPredicted RBP7.01□□□□□ -1.29
TRAFD1-207ENST00000550051 DHODHQ02127 395 aa7.01□□□□□ -1.29
TRAFD1-207ENST00000550051 OXA1LQ15070 435 aa7.01□□□□□ -1.29
TRAFD1-207ENST00000550051 LHFPL1Q86WI0 220 aa7.01□□□□□ -1.29
TRAFD1-207ENST00000550051 ZNF575Q86XF7 245 aa7.01□□□□□ -1.29
TRAFD1-207ENST00000550051 OR52E5Q8NH55 327 aa7.01□□□□□ -1.29
TRAFD1-207ENST00000550051 TP53RKQ96S44 253 aa7.01□□□□□ -1.29
TRAFD1-207ENST00000550051 ENY2Q9NPA8 101 aa7.01□□□□□ -1.29
TRAFD1-207ENST00000550051 NRN1Q9NPD7 142 aa7.01□□□□□ -1.29
TRAFD1-207ENST00000550051 DKK2Q9UBU2 259 aa7.01□□□□□ -1.29
TRAFD1-207ENST00000550051 HLA-DRB4X5D2U9 266 aa7.01□□□□□ -1.29
TRAFD1-207ENST00000550051 DYNC1H1Q14204 4646 aaKnown RBP7□□□□□ -1.29
TRAFD1-207ENST00000550051 DNAH11Q96DT5 4516 aa7□□□□□ -1.29
TRAFD1-207ENST00000550051 C3orf85A0A1B0GTC6 90 aa7□□□□□ -1.29
TRAFD1-207ENST00000550051 CDK2AP2O75956 126 aa7□□□□□ -1.29
TRAFD1-207ENST00000550051 APOA1P02647 267 aa7□□□□□ -1.29
TRAFD1-207ENST00000550051 RCVRNP35243 200 aa7□□□□□ -1.29
TRAFD1-207ENST00000550051 AKR1C2P52895 323 aa7□□□□□ -1.29
TRAFD1-207ENST00000550051 PIGPP57054 158 aa7□□□□□ -1.29
TRAFD1-207ENST00000550051 FAM3BP58499 235 aaPredicted RBP7□□□□□ -1.29
TRAFD1-207ENST00000550051 SPCS3P61009 180 aa7□□□□□ -1.29
TRAFD1-207ENST00000550051 C2orf83Q53S99 150 aa7□□□□□ -1.29
TRAFD1-207ENST00000550051 C1orf134Q5TEV5 83 aa7□□□□□ -1.29
TRAFD1-207ENST00000550051 PRSS54Q6PEW0 395 aa7□□□□□ -1.29
TRAFD1-207ENST00000550051 UBE2DNLQ8IWF7 75 aa7□□□□□ -1.29
TRAFD1-207ENST00000550051 RNASEH2CQ8TDP1 164 aaKnown RBP7□□□□□ -1.29
TRAFD1-207ENST00000550051 RRNAD1Q96FB5 475 aaKnown RBP7□□□□□ -1.29
TRAFD1-207ENST00000550051 NIPSNAP3BQ9BS92 247 aa7□□□□□ -1.29
TRAFD1-207ENST00000550051 Q9H521 79 aa7□□□□□ -1.29
TRAFD1-207ENST00000550051 RFNGQ9Y644 331 aa7□□□□□ -1.29
TRAFD1-207ENST00000550051 RGS13O14921 159 aa6.99□□□□□ -1.29
TRAFD1-207ENST00000550051 B3GALNT1O75752 331 aa6.99□□□□□ -1.29
TRAFD1-207ENST00000550051 PGAM2P15259 253 aa6.99□□□□□ -1.29
TRAFD1-207ENST00000550051 PI3P19957 117 aa6.99□□□□□ -1.29
TRAFD1-207ENST00000550051 UCP1P25874 307 aa6.99□□□□□ -1.29
TRAFD1-207ENST00000550051 OR10J1P30954 320 aa6.99□□□□□ -1.29
TRAFD1-207ENST00000550051 TGFBR1P36897 503 aa6.99□□□□□ -1.29
TRAFD1-207ENST00000550051 NEDD8Q15843 81 aa6.99□□□□□ -1.29
TRAFD1-207ENST00000550051 USF2Q15853 346 aaPredicted RBP6.99□□□□□ -1.29
TRAFD1-207ENST00000550051 SIGLEC15Q6ZMC9 328 aa6.99□□□□□ -1.29
TRAFD1-207ENST00000550051 FAM219AQ8IW50 185 aa6.99□□□□□ -1.29
TRAFD1-207ENST00000550051 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.99□□□□□ -1.29
TRAFD1-207ENST00000550051 A0A0G2JRQ6 117 aa6.98□□□□□ -1.29
TRAFD1-207ENST00000550051 M0QYG6 137 aa6.98□□□□□ -1.29
TRAFD1-207ENST00000550051 GSTZ1O43708 216 aaPredicted RBP6.98□□□□□ -1.29
TRAFD1-207ENST00000550051 CDS2O95674 445 aa6.98□□□□□ -1.29
TRAFD1-207ENST00000550051 TOMM40O96008 361 aa6.98□□□□□ -1.29
TRAFD1-207ENST00000550051 IL4P05112 153 aa6.98□□□□□ -1.29
TRAFD1-207ENST00000550051 RD3LP0DJH9 198 aa6.98□□□□□ -1.29
TRAFD1-207ENST00000550051 RND2P52198 227 aa6.98□□□□□ -1.29
TRAFD1-207ENST00000550051 EMP1P54849 157 aa6.98□□□□□ -1.29
TRAFD1-207ENST00000550051 TRIM16LQ309B1 348 aa6.98□□□□□ -1.29
TRAFD1-207ENST00000550051 SP6Q3SY56 376 aa6.98□□□□□ -1.29
TRAFD1-207ENST00000550051 GDF5OSQ5U4N7 250 aa6.98□□□□□ -1.29
TRAFD1-207ENST00000550051 FAM222AQ5U5X8 452 aa6.98□□□□□ -1.29
TRAFD1-207ENST00000550051 SPATA31B1PQ5VZV4 182 aa6.98□□□□□ -1.29
TRAFD1-207ENST00000550051 ETFRF1Q6IPR1 90 aa6.98□□□□□ -1.29
TRAFD1-207ENST00000550051 ARRDC1Q8N5I2 433 aa6.98□□□□□ -1.29
TRAFD1-207ENST00000550051 ZNF709Q8N972 641 aa6.98□□□□□ -1.29
TRAFD1-207ENST00000550051 ZFAND1Q8TCF1 268 aa6.98□□□□□ -1.29
TRAFD1-207ENST00000550051 SAV1Q9H4B6 383 aaPredicted RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms