RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 CLEC5AQ9NY25 188 aa11.58□□□□□ -0.55
CACNB3-209ENST00000548860 WASHC3Q9Y3C0 194 aa11.58□□□□□ -0.55
CACNB3-209ENST00000548860 UPK2O00526 184 aa11.58□□□□□ -0.56
CACNB3-209ENST00000548860 FXYD7P58549 80 aa11.58□□□□□ -0.56
CACNB3-209ENST00000548860 GBGT1Q8N5D6 347 aa11.58□□□□□ -0.56
CACNB3-209ENST00000548860 CBY3A6NI87 242 aa11.58□□□□□ -0.56
CACNB3-209ENST00000548860 CCDC168Q8NDH2 2452 aa11.58□□□□□ -0.56
CACNB3-209ENST00000548860 ZNF430Q9H8G1 570 aaPredicted RBP11.58□□□□□ -0.56
CACNB3-209ENST00000548860 CORTO00230 105 aa11.57□□□□□ -0.56
CACNB3-209ENST00000548860 PNKDQ8N490 385 aa11.57□□□□□ -0.56
CACNB3-209ENST00000548860 ZCCHC14Q8WYQ9 949 aaKnown RBP11.57□□□□□ -0.56
CACNB3-209ENST00000548860 EXPH5Q8NEV8 1989 aa11.57□□□□□ -0.56
CACNB3-209ENST00000548860 ZFYVE26Q68DK2 2539 aa11.57□□□□□ -0.56
CACNB3-209ENST00000548860 IGHV3OR16-10A0A075B7F0 116 aa11.57□□□□□ -0.56
CACNB3-209ENST00000548860 NPIPB11E5RHQ5 1161 aa11.57□□□□□ -0.56
CACNB3-209ENST00000548860 FAM168AQ92567 244 aa11.57□□□□□ -0.56
CACNB3-209ENST00000548860 OR8B2Q96RD0 313 aa11.57□□□□□ -0.56
CACNB3-209ENST00000548860 ISLRO14498 428 aa11.57□□□□□ -0.56
CACNB3-209ENST00000548860 AREGP15514 252 aa11.57□□□□□ -0.56
CACNB3-209ENST00000548860 NDUFAF3Q9BU61 184 aa11.57□□□□□ -0.56
CACNB3-209ENST00000548860 SPRY4Q9C004 299 aa11.57□□□□□ -0.56
CACNB3-209ENST00000548860 NRN1Q9NPD7 142 aa11.57□□□□□ -0.56
CACNB3-209ENST00000548860 TMEM106BQ9NUM4 274 aa11.57□□□□□ -0.56
CACNB3-209ENST00000548860 TMEM242Q9NWH2 141 aa11.57□□□□□ -0.56
CACNB3-209ENST00000548860 DLL1O00548 723 aa11.57□□□□□ -0.56
CACNB3-209ENST00000548860 S100A7P31151 101 aa11.57□□□□□ -0.56
CACNB3-209ENST00000548860 C17orf58Q2M2W7 97 aa11.57□□□□□ -0.56
CACNB3-209ENST00000548860 ACTL10Q5JWF8 245 aa11.57□□□□□ -0.56
CACNB3-209ENST00000548860 TCTEX1D1Q8N7M0 179 aa11.57□□□□□ -0.56
CACNB3-209ENST00000548860 OR4C13Q8NGP0 309 aa11.57□□□□□ -0.56
CACNB3-209ENST00000548860 HIGD1CA8MV81 97 aa11.56□□□□□ -0.56
CACNB3-209ENST00000548860 K7EN84 100 aa11.56□□□□□ -0.56
CACNB3-209ENST00000548860 FCGR2BP31994 310 aaPredicted RBP11.56□□□□□ -0.56
CACNB3-209ENST00000548860 TMEM200BQ69YZ2 307 aa11.56□□□□□ -0.56
CACNB3-209ENST00000548860 TMEM144Q7Z5S9 345 aa11.56□□□□□ -0.56
CACNB3-209ENST00000548860 C19orf67A6NJJ6 358 aa11.56□□□□□ -0.56
CACNB3-209ENST00000548860 HYPMO75409 117 aa11.56□□□□□ -0.56
CACNB3-209ENST00000548860 Q6ZVH6 145 aa11.56□□□□□ -0.56
CACNB3-209ENST00000548860 EXOC3-AS1Q8N2X6 119 aa11.56□□□□□ -0.56
CACNB3-209ENST00000548860 C11orf42Q8N5U0 333 aa11.56□□□□□ -0.56
CACNB3-209ENST00000548860 RASL11BQ9BPW5 248 aa11.56□□□□□ -0.56
CACNB3-209ENST00000548860 HIF1ANQ9NWT6 349 aa11.56□□□□□ -0.56
CACNB3-209ENST00000548860 DKK4Q9UBT3 224 aa11.56□□□□□ -0.56
CACNB3-209ENST00000548860 TACC2O95359 2948 aa11.56□□□□□ -0.56
CACNB3-209ENST00000548860 C17orf100A8MU93 164 aa11.56□□□□□ -0.56
CACNB3-209ENST00000548860 VDAC2P45880 294 aaPredicted RBP11.56□□□□□ -0.56
CACNB3-209ENST00000548860 RBPJQ06330 500 aa11.56□□□□□ -0.56
CACNB3-209ENST00000548860 IGFL4Q6B9Z1 124 aa11.56□□□□□ -0.56
CACNB3-209ENST00000548860 GAFA1Q96PS6 74 aa11.56□□□□□ -0.56
CACNB3-209ENST00000548860 PMS2P5A8MQ11 134 aa11.55□□□□□ -0.56
CACNB3-209ENST00000548860 J3QW42 95 aa11.55□□□□□ -0.56
CACNB3-209ENST00000548860 LCN2P80188 198 aa11.55□□□□□ -0.56
CACNB3-209ENST00000548860 DPRXA6NFQ7 191 aa11.55□□□□□ -0.56
CACNB3-209ENST00000548860 E7EUB6 86 aa11.55□□□□□ -0.56
CACNB3-209ENST00000548860 GGCTO75223 188 aaKnown RBP11.55□□□□□ -0.56
CACNB3-209ENST00000548860 CD3EP07766 207 aa11.55□□□□□ -0.56
CACNB3-209ENST00000548860 NBEAP1P0C6P0 100 aa11.55□□□□□ -0.56
CACNB3-209ENST00000548860 CT45A10P0DMU9 189 aa11.55□□□□□ -0.56
CACNB3-209ENST00000548860 LOXL3P58215 753 aa11.55□□□□□ -0.56
CACNB3-209ENST00000548860 PRSS3P2Q8NHM4 247 aa11.55□□□□□ -0.56
CACNB3-209ENST00000548860 RPUSD1Q9UJJ7 312 aaKnown RBP11.55□□□□□ -0.56
CACNB3-209ENST00000548860 SONP18583 2426 aaKnown RBP11.55□□□□□ -0.56
CACNB3-209ENST00000548860 GGTLC3B5MD39 225 aa11.55□□□□□ -0.56
CACNB3-209ENST00000548860 OR8A1Q8NGG7 326 aa11.55□□□□□ -0.56
CACNB3-209ENST00000548860 VSTM2AQ8TAG5 236 aa11.55□□□□□ -0.56
CACNB3-209ENST00000548860 SRSF12Q8WXF0 261 aaKnown RBP11.55□□□□□ -0.56
CACNB3-209ENST00000548860 POLR3KQ9Y2Y1 108 aaPredicted RBP11.54□□□□□ -0.56
CACNB3-209ENST00000548860 ZNF207O43670 478 aaKnown RBP11.54□□□□□ -0.56
CACNB3-209ENST00000548860 GNG7O60262 68 aa11.54□□□□□ -0.56
CACNB3-209ENST00000548860 MAS1LP35410 378 aa11.54□□□□□ -0.56
CACNB3-209ENST00000548860 CD69Q07108 199 aa11.54□□□□□ -0.56
CACNB3-209ENST00000548860 TMUB1Q9BVT8 246 aa11.54□□□□□ -0.56
CACNB3-209ENST00000548860 FAM215AQ9Y5M1 114 aa11.54□□□□□ -0.56
CACNB3-209ENST00000548860 CENPEQ02224 2701 aa11.54□□□□□ -0.56
CACNB3-209ENST00000548860 WDR73Q6P4I2 378 aa11.54□□□□□ -0.56
CACNB3-209ENST00000548860 A8MWP6 167 aa11.53□□□□□ -0.56
CACNB3-209ENST00000548860 TAS2R60P59551 318 aa11.53□□□□□ -0.56
CACNB3-209ENST00000548860 LOXL4Q96JB6 756 aa11.53□□□□□ -0.56
CACNB3-209ENST00000548860 AP1S3Q96PC3 154 aa11.53□□□□□ -0.56
CACNB3-209ENST00000548860 RCHY1Q96PM5 261 aa11.53□□□□□ -0.56
CACNB3-209ENST00000548860 SNHG12Q9BXW3 62 aa11.53□□□□□ -0.56
CACNB3-209ENST00000548860 PEX7O00628 323 aa11.53□□□□□ -0.56
CACNB3-209ENST00000548860 RPLP1P05386 114 aaKnown RBP11.53□□□□□ -0.56
CACNB3-209ENST00000548860 PRCDQ00LT1 54 aa11.53□□□□□ -0.56
CACNB3-209ENST00000548860 SEM1Q6ZVN7 128 aa11.53□□□□□ -0.56
CACNB3-209ENST00000548860 PERPQ96FX8 193 aa11.53□□□□□ -0.56
CACNB3-209ENST00000548860 RITA1Q96K30 269 aa11.53□□□□□ -0.56
CACNB3-209ENST00000548860 POLQO75417 2590 aa11.53□□□□□ -0.56
CACNB3-209ENST00000548860 DSCAMO60469 2012 aa11.53□□□□□ -0.56
CACNB3-209ENST00000548860 CCL21O00585 134 aa11.53□□□□□ -0.56
CACNB3-209ENST00000548860 PTTG1IPP53801 180 aa11.53□□□□□ -0.56
CACNB3-209ENST00000548860 ECSCRQ19T08 205 aa11.53□□□□□ -0.56
CACNB3-209ENST00000548860 Q6ZWC4 215 aa11.53□□□□□ -0.56
CACNB3-209ENST00000548860 PRR7Q8TB68 274 aa11.53□□□□□ -0.56
CACNB3-209ENST00000548860 DEFB104AQ8WTQ1 72 aa11.53□□□□□ -0.56
CACNB3-209ENST00000548860 FOXA2Q9Y261 457 aaPredicted RBP11.53□□□□□ -0.56
CACNB3-209ENST00000548860 IGKV1OR2-108A0A075B7D4 117 aa11.52□□□□□ -0.56
CACNB3-209ENST00000548860 IGHV1-69-2A0A0G2JMI3 117 aa11.52□□□□□ -0.56
CACNB3-209ENST00000548860 A0A0G2JNJ9 132 aa11.52□□□□□ -0.56
CACNB3-209ENST00000548860 AMY1AP04745 511 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms