RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 ATMQ13315 3056 aa0.43□□□□□ -2.34
CCDC38-206ENST00000548771 ABCA12Q86UK0 2595 aa0.43□□□□□ -2.34
CCDC38-206ENST00000548771 CHD9Q3L8U1 2897 aa0.43□□□□□ -2.34
CCDC38-206ENST00000548771 IGKV1D-42A0A075B6H8 117 aa0.43□□□□□ -2.34
CCDC38-206ENST00000548771 LOC110117498A0A087WWA1 95 aa0.43□□□□□ -2.34
CCDC38-206ENST00000548771 A0A0A6YYH2 397 aa0.43□□□□□ -2.34
CCDC38-206ENST00000548771 A6NJ64 397 aa0.43□□□□□ -2.34
CCDC38-206ENST00000548771 H0Y980 276 aa0.43□□□□□ -2.34
CCDC38-206ENST00000548771 M0QX08 132 aa0.43□□□□□ -2.34
CCDC38-206ENST00000548771 CXCR6O00574 342 aa0.43□□□□□ -2.34
CCDC38-206ENST00000548771 HYPMO75409 117 aa0.43□□□□□ -2.34
CCDC38-206ENST00000548771 CLPSP04118 112 aa0.43□□□□□ -2.34
CCDC38-206ENST00000548771 ASAH2BP0C7U1 165 aa0.43□□□□□ -2.34
CCDC38-206ENST00000548771 OCM2P0CE71 109 aa0.43□□□□□ -2.34
CCDC38-206ENST00000548771 FKBP2P26885 142 aaKnown RBP0.43□□□□□ -2.34
CCDC38-206ENST00000548771 NAA20P61599 178 aa0.43□□□□□ -2.34
CCDC38-206ENST00000548771 OGFRL1Q5TC84 451 aaPredicted RBP0.43□□□□□ -2.34
CCDC38-206ENST00000548771 FAM151BQ6UXP7 276 aa0.43□□□□□ -2.34
CCDC38-206ENST00000548771 DPPA3Q6W0C5 159 aa0.43□□□□□ -2.34
CCDC38-206ENST00000548771 Q6ZQT0 140 aa0.43□□□□□ -2.34
CCDC38-206ENST00000548771 ZNF826PQ6ZT77 177 aa0.43□□□□□ -2.34
CCDC38-206ENST00000548771 PHF13Q86YI8 300 aaPredicted RBP0.43□□□□□ -2.34
CCDC38-206ENST00000548771 C1orf158Q8N1D5 194 aa0.43□□□□□ -2.34
CCDC38-206ENST00000548771 RAB8BQ92930 207 aa0.43□□□□□ -2.34
CCDC38-206ENST00000548771 SCGB3A1Q96QR1 104 aa0.43□□□□□ -2.34
CCDC38-206ENST00000548771 DERL1Q9BUN8 251 aa0.43□□□□□ -2.34
CCDC38-206ENST00000548771 WDR61Q9GZS3 305 aaKnown RBP0.43□□□□□ -2.34
CCDC38-206ENST00000548771 SOGA1O94964 1423 aa0.43□□□□□ -2.34
CCDC38-206ENST00000548771 TRAPPC8Q9Y2L5 1435 aa0.43□□□□□ -2.34
CCDC38-206ENST00000548771 UNC13BO14795 1591 aa0.43□□□□□ -2.34
CCDC38-206ENST00000548771 KDM5CP41229 1560 aa0.43□□□□□ -2.34
CCDC38-206ENST00000548771 DNMBPQ6XZF7 1577 aa0.43□□□□□ -2.34
CCDC38-206ENST00000548771 HERC2O95714 4834 aa0.43□□□□□ -2.34
CCDC38-206ENST00000548771 DOPEY1Q5JWR5 2465 aa0.43□□□□□ -2.34
CCDC38-206ENST00000548771 ANK2Q01484 3957 aa0.43□□□□□ -2.34
CCDC38-206ENST00000548771 DLC1Q96QB1 1528 aa0.43□□□□□ -2.34
CCDC38-206ENST00000548771 KDM5DQ9BY66 1539 aa0.43□□□□□ -2.34
CCDC38-206ENST00000548771 HERC1Q15751 4861 aa0.43□□□□□ -2.34
CCDC38-206ENST00000548771 ANAPC1Q9H1A4 1944 aa0.42□□□□□ -2.34
CCDC38-206ENST00000548771 MAST2Q6P0Q8 1798 aa0.42□□□□□ -2.34
CCDC38-206ENST00000548771 HECW1Q76N89 1606 aa0.42□□□□□ -2.34
CCDC38-206ENST00000548771 NRXN3Q9Y4C0 1643 aa0.42□□□□□ -2.34
CCDC38-206ENST00000548771 UHRF1BP1LA0JNW5 1464 aa0.42□□□□□ -2.34
CCDC38-206ENST00000548771 MED14O60244 1454 aa0.42□□□□□ -2.34
CCDC38-206ENST00000548771 NRXN1Q9ULB1 1477 aa0.42□□□□□ -2.34
CCDC38-206ENST00000548771 FSIP2Q5CZC0 6907 aa0.42□□□□□ -2.34
CCDC38-206ENST00000548771 MAP1BP46821 2468 aaKnown RBP0.42□□□□□ -2.34
CCDC38-206ENST00000548771 POLR1AO95602 1720 aaPredicted RBP0.42□□□□□ -2.34
CCDC38-206ENST00000548771 DSPP15924 2871 aaKnown RBP0.42□□□□□ -2.34
CCDC38-206ENST00000548771 FMN2Q9NZ56 1722 aa0.42□□□□□ -2.34
CCDC38-206ENST00000548771 SYNMO15061 1565 aa0.42□□□□□ -2.34
CCDC38-206ENST00000548771 ABCC8Q09428 1581 aa0.42□□□□□ -2.34
CCDC38-206ENST00000548771 TIAM1Q13009 1591 aa0.42□□□□□ -2.34
CCDC38-206ENST00000548771 SVEP1Q4LDE5 3571 aa0.42□□□□□ -2.34
CCDC38-206ENST00000548771 DCCP43146 1447 aa0.42□□□□□ -2.34
CCDC38-206ENST00000548771 FGD6Q6ZV73 1430 aa0.42□□□□□ -2.34
CCDC38-206ENST00000548771 LINC00854A0A1B0GVQ3 168 aa0.42□□□□□ -2.34
CCDC38-206ENST00000548771 INMT-MINDY4F8WBC2 141 aa0.42□□□□□ -2.34
CCDC38-206ENST00000548771 ACOX3O15254 700 aa0.42□□□□□ -2.34
CCDC38-206ENST00000548771 CRYGAP11844 174 aa0.42□□□□□ -2.34
CCDC38-206ENST00000548771 SPI1P17947 270 aa0.42□□□□□ -2.34
CCDC38-206ENST00000548771 HIST1H2BOP23527 126 aa0.42□□□□□ -2.34
CCDC38-206ENST00000548771 HIST1H2BBP33778 126 aa0.42□□□□□ -2.34
CCDC38-206ENST00000548771 HIST1H2BDP58876 126 aa0.42□□□□□ -2.34
CCDC38-206ENST00000548771 HIST1H2BCP62807 126 aa0.42□□□□□ -2.34
CCDC38-206ENST00000548771 HIST2H2BEQ16778 126 aa0.42□□□□□ -2.34
CCDC38-206ENST00000548771 SPANXN3Q5MJ09 141 aa0.42□□□□□ -2.34
CCDC38-206ENST00000548771 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.42□□□□□ -2.34
CCDC38-206ENST00000548771 PDPK2PQ6A1A2 396 aa0.42□□□□□ -2.34
CCDC38-206ENST00000548771 RPL22L1Q6P5R6 122 aaKnown RBP0.42□□□□□ -2.34
CCDC38-206ENST00000548771 LINC00311Q8N616 119 aa0.42□□□□□ -2.34
CCDC38-206ENST00000548771 Q8N814 137 aa0.42□□□□□ -2.34
CCDC38-206ENST00000548771 OR4E2Q8NGC2 313 aa0.42□□□□□ -2.34
CCDC38-206ENST00000548771 OR51D1Q8NGF3 324 aa0.42□□□□□ -2.34
CCDC38-206ENST00000548771 HIST1H2BHQ93079 126 aa0.42□□□□□ -2.34
CCDC38-206ENST00000548771 CFAP53Q96M91 514 aa0.42□□□□□ -2.34
CCDC38-206ENST00000548771 HIST1H2BNQ99877 126 aa0.42□□□□□ -2.34
CCDC38-206ENST00000548771 HIST1H2BMQ99879 126 aa0.42□□□□□ -2.34
CCDC38-206ENST00000548771 PRO3102Q9H379 93 aa0.42□□□□□ -2.34
CCDC38-206ENST00000548771 ACER3Q9NUN7 267 aa0.42□□□□□ -2.34
CCDC38-206ENST00000548771 TPRP12270 2363 aaKnown RBP0.42□□□□□ -2.34
CCDC38-206ENST00000548771 ZDBF2Q9HCK1 2354 aa0.42□□□□□ -2.34
CCDC38-206ENST00000548771 CROCC2H7BZ55 1655 aa0.42□□□□□ -2.34
CCDC38-206ENST00000548771 TET3O43151 1660 aa0.42□□□□□ -2.34
CCDC38-206ENST00000548771 ITSN2Q9NZM3 1697 aa0.42□□□□□ -2.34
CCDC38-206ENST00000548771 MDN1Q9NU22 5596 aa0.42□□□□□ -2.34
CCDC38-206ENST00000548771 PIEZO2Q9H5I5 2752 aa0.42□□□□□ -2.34
CCDC38-206ENST00000548771 ABCC1P33527 1531 aa0.42□□□□□ -2.34
CCDC38-206ENST00000548771 PRDM15P57071 1507 aaPredicted RBP0.42□□□□□ -2.34
CCDC38-206ENST00000548771 ZFYVE16Q7Z3T8 1539 aa0.42□□□□□ -2.34
CCDC38-206ENST00000548771 CEP290O15078 2479 aa0.42□□□□□ -2.34
CCDC38-206ENST00000548771 PRKDCP78527 4128 aaKnown RBP0.42□□□□□ -2.34
CCDC38-206ENST00000548771 MAP3K5Q99683 1374 aa0.42□□□□□ -2.34
CCDC38-206ENST00000548771 PREX2Q70Z35 1606 aa0.42□□□□□ -2.34
CCDC38-206ENST00000548771 FANCAO15360 1455 aa0.41□□□□□ -2.34
CCDC38-206ENST00000548771 ATP10BO94823 1461 aa0.41□□□□□ -2.34
CCDC38-206ENST00000548771 ZCCHC6Q5VYS8 1495 aaKnown RBP0.41□□□□□ -2.34
CCDC38-206ENST00000548771 ADGRG4Q8IZF6 3080 aa0.41□□□□□ -2.34
CCDC38-206ENST00000548771 SPHKAPQ2M3C7 1700 aa0.41□□□□□ -2.34
CCDC38-206ENST00000548771 ARHGEF28Q8N1W1 1705 aaKnown RBP0.41□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms