RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 PPP1R1AQ13522 171 aa10.35□□□□□ -0.75
PTCH1-217ENST00000548420 SMCO1Q147U7 214 aa10.35□□□□□ -0.75
PTCH1-217ENST00000548420 LYG2Q86SG7 212 aa10.35□□□□□ -0.75
PTCH1-217ENST00000548420 GTSCR1Q86UQ5 136 aa10.35□□□□□ -0.75
PTCH1-217ENST00000548420 CENPSQ8N2Z9 138 aa10.35□□□□□ -0.75
PTCH1-217ENST00000548420 UBAC2Q8NBM4 344 aa10.35□□□□□ -0.75
PTCH1-217ENST00000548420 DYNLRB2Q8TF09 96 aa10.35□□□□□ -0.75
PTCH1-217ENST00000548420 TMEM170AQ8WVE7 144 aa10.35□□□□□ -0.75
PTCH1-217ENST00000548420 PINX1Q96BK5 328 aaKnown RBP10.35□□□□□ -0.75
PTCH1-217ENST00000548420 OR10C1Q96KK4 312 aa10.35□□□□□ -0.75
PTCH1-217ENST00000548420 DAZ1Q9NQZ3 744 aaKnown RBP10.35□□□□□ -0.75
PTCH1-217ENST00000548420 TRAV25A0A0B4J276 109 aa10.34□□□□□ -0.75
PTCH1-217ENST00000548420 NPBWR1P48145 328 aa10.34□□□□□ -0.75
PTCH1-217ENST00000548420 INPP1P49441 399 aa10.34□□□□□ -0.75
PTCH1-217ENST00000548420 RELQ04864 619 aaPredicted RBP10.34□□□□□ -0.75
PTCH1-217ENST00000548420 MLANAQ16655 118 aa10.34□□□□□ -0.75
PTCH1-217ENST00000548420 TMEM61Q8N0U2 210 aa10.34□□□□□ -0.75
PTCH1-217ENST00000548420 DUSP18Q8NEJ0 188 aa10.34□□□□□ -0.75
PTCH1-217ENST00000548420 OR4X1Q8NH49 305 aa10.34□□□□□ -0.75
PTCH1-217ENST00000548420 WDR89Q96FK6 387 aaPredicted RBP10.34□□□□□ -0.75
PTCH1-217ENST00000548420 HEYLQ9NQ87 328 aaPredicted RBP10.34□□□□□ -0.75
PTCH1-217ENST00000548420 MRPL36Q9P0J6 103 aaKnown RBP10.34□□□□□ -0.75
PTCH1-217ENST00000548420 CENPXA8MT69 81 aa10.33□□□□□ -0.76
PTCH1-217ENST00000548420 CEBPZOSA8MTT3 80 aa10.33□□□□□ -0.76
PTCH1-217ENST00000548420 GNG7O60262 68 aa10.33□□□□□ -0.76
PTCH1-217ENST00000548420 RNASEH2CQ8TDP1 164 aaKnown RBP10.33□□□□□ -0.76
PTCH1-217ENST00000548420 RNF183Q96D59 192 aa10.33□□□□□ -0.76
PTCH1-217ENST00000548420 FLVCR2Q9UPI3 526 aa10.33□□□□□ -0.76
PTCH1-217ENST00000548420 TMED3Q9Y3Q3 217 aa10.33□□□□□ -0.76
PTCH1-217ENST00000548420 C9orf170A2RU37 121 aa10.32□□□□□ -0.76
PTCH1-217ENST00000548420 CLN5O75503 358 aa10.32□□□□□ -0.76
PTCH1-217ENST00000548420 CD7P09564 240 aa10.32□□□□□ -0.76
PTCH1-217ENST00000548420 RBMY1A1P0DJD3 496 aaKnown RBP10.32□□□□□ -0.76
PTCH1-217ENST00000548420 VAMP1P23763 118 aa10.32□□□□□ -0.76
PTCH1-217ENST00000548420 ATP5IP56385 69 aaPredicted RBP10.32□□□□□ -0.76
PTCH1-217ENST00000548420 CNPY1Q3B7I2 92 aa10.32□□□□□ -0.76
PTCH1-217ENST00000548420 BTNL8Q6UX41 500 aa10.32□□□□□ -0.76
PTCH1-217ENST00000548420 SLC24A4Q8NFF2 622 aa10.32□□□□□ -0.76
PTCH1-217ENST00000548420 NEURL2Q9BR09 285 aa10.32□□□□□ -0.76
PTCH1-217ENST00000548420 SMPXQ9UHP9 88 aa10.32□□□□□ -0.76
PTCH1-217ENST00000548420 U3KQ87 197 aa10.32□□□□□ -0.76
PTCH1-217ENST00000548420 FLG2Q5D862 2391 aaPredicted RBP10.32□□□□□ -0.76
PTCH1-217ENST00000548420 LINC00854A0A1B0GVQ3 168 aa10.31□□□□□ -0.76
PTCH1-217ENST00000548420 FAM90A26D6RGX4 464 aa10.31□□□□□ -0.76
PTCH1-217ENST00000548420 OPRK1P41145 380 aa10.31□□□□□ -0.76
PTCH1-217ENST00000548420 TOMM20LQ6UXN7 152 aa10.31□□□□□ -0.76
PTCH1-217ENST00000548420 NOXA1Q86UR1 476 aa10.31□□□□□ -0.76
PTCH1-217ENST00000548420 TMEM116Q8NCL8 245 aa10.31□□□□□ -0.76
PTCH1-217ENST00000548420 DTD1Q8TEA8 209 aa10.31□□□□□ -0.76
PTCH1-217ENST00000548420 CCDC32Q9BV29 185 aa10.31□□□□□ -0.76
PTCH1-217ENST00000548420 RBKSQ9H477 322 aa10.31□□□□□ -0.76
PTCH1-217ENST00000548420 SRD5A3Q9H8P0 318 aa10.31□□□□□ -0.76
PTCH1-217ENST00000548420 IGHV3OR16-8A0A075B7F1 116 aa10.3□□□□□ -0.76
PTCH1-217ENST00000548420 IGHV7-4-1A0A0J9YVY3 117 aa10.3□□□□□ -0.76
PTCH1-217ENST00000548420 RPS10-NUDT3A0A1W2PQS6 291 aa10.3□□□□□ -0.76
PTCH1-217ENST00000548420 TSPAN4O14817 238 aa10.3□□□□□ -0.76
PTCH1-217ENST00000548420 NXPH3O95157 252 aa10.3□□□□□ -0.76
PTCH1-217ENST00000548420 IGKV1-17P01599 117 aa10.3□□□□□ -0.76
PTCH1-217ENST00000548420 OR4E1P0C645 316 aa10.3□□□□□ -0.76
PTCH1-217ENST00000548420 SLC25A4P12235 298 aa10.3□□□□□ -0.76
PTCH1-217ENST00000548420 NPY1RP25929 384 aa10.3□□□□□ -0.76
PTCH1-217ENST00000548420 CD81P60033 236 aa10.3□□□□□ -0.76
PTCH1-217ENST00000548420 DHRS2Q13268 280 aa10.3□□□□□ -0.76
PTCH1-217ENST00000548420 GUCA2BQ16661 112 aa10.3□□□□□ -0.76
PTCH1-217ENST00000548420 PRSS54Q6PEW0 395 aa10.3□□□□□ -0.76
PTCH1-217ENST00000548420 ZNF600Q6ZNG1 722 aa10.3□□□□□ -0.76
PTCH1-217ENST00000548420 OR1S1Q8NH92 325 aa10.3□□□□□ -0.76
PTCH1-217ENST00000548420 C20orf24Q9BUV8 137 aa10.3□□□□□ -0.76
PTCH1-217ENST00000548420 ZFAND3Q9H8U3 227 aa10.3□□□□□ -0.76
PTCH1-217ENST00000548420 SELENOKQ9Y6D0 94 aa10.3□□□□□ -0.76
PTCH1-217ENST00000548420 TRAV30A0A087WSZ9 112 aa10.29□□□□□ -0.76
PTCH1-217ENST00000548420 TRAV14DV4A0A0A6YYC5 116 aa10.29□□□□□ -0.76
PTCH1-217ENST00000548420 CHEK1O14757 476 aa10.29□□□□□ -0.76
PTCH1-217ENST00000548420 LYRM1O43325 122 aa10.29□□□□□ -0.76
PTCH1-217ENST00000548420 ZNF207O43670 478 aaKnown RBP10.29□□□□□ -0.76
PTCH1-217ENST00000548420 SCAF4O95104 1147 aaKnown RBP10.29□□□□□ -0.76
PTCH1-217ENST00000548420 ATF4P18848 351 aaPredicted RBP10.29□□□□□ -0.76
PTCH1-217ENST00000548420 GGNBP1Q5YKI7 109 aa10.29□□□□□ -0.76
PTCH1-217ENST00000548420 S100ZQ8WXG8 99 aa10.29□□□□□ -0.76
PTCH1-217ENST00000548420 SPAG8Q99932 426 aaPredicted RBP10.29□□□□□ -0.76
PTCH1-217ENST00000548420 APLNQ9ULZ1 77 aa10.29□□□□□ -0.76
PTCH1-217ENST00000548420 HMCN2Q8NDA2 5059 aa10.29□□□□□ -0.76
PTCH1-217ENST00000548420 OR11H12B2RN74 326 aa10.28□□□□□ -0.76
PTCH1-217ENST00000548420 YIF1AO95070 293 aa10.28□□□□□ -0.76
PTCH1-217ENST00000548420 IFNA10P01566 189 aa10.28□□□□□ -0.76
PTCH1-217ENST00000548420 HOXB5P09067 269 aa10.28□□□□□ -0.76
PTCH1-217ENST00000548420 IGLC1P0CG04 106 aa10.28□□□□□ -0.76
PTCH1-217ENST00000548420 ANXA7P20073 488 aaKnown RBP10.28□□□□□ -0.76
PTCH1-217ENST00000548420 FAM90A2PQ658T7 463 aa10.28□□□□□ -0.76
PTCH1-217ENST00000548420 LAMTOR1Q6IAA8 161 aa10.28□□□□□ -0.76
PTCH1-217ENST00000548420 ETFRF1Q6IPR1 90 aa10.28□□□□□ -0.76
PTCH1-217ENST00000548420 RBPMS2Q6ZRY4 209 aaKnown RBP10.28□□□□□ -0.76
PTCH1-217ENST00000548420 SLC16A13Q7RTY0 426 aa10.28□□□□□ -0.76
PTCH1-217ENST00000548420 WFDC3Q8IUB2 231 aa10.28□□□□□ -0.76
PTCH1-217ENST00000548420 RHPN1-AS1Q9BWJ2 59 aa10.28□□□□□ -0.76
PTCH1-217ENST00000548420 VSIRQ9H7M9 311 aa10.28□□□□□ -0.76
PTCH1-217ENST00000548420 PTTG2Q9NZH5 202 aa10.28□□□□□ -0.76
PTCH1-217ENST00000548420 PUS1Q9Y606 427 aaKnown RBP eCLIP10.28□□□□□ -0.76
PTCH1-217ENST00000548420 FAT1Q14517 4588 aa10.27□□□□□ -0.76
PTCH1-217ENST00000548420 MED6O75586 246 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms