RNA–Protein interactions for RNA: ENST00000548097.5

KRT4-201, Transcript of keratin 4, humanhuman

TSL 1 (best)

Gene KRT4, Length 1,839 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4-201ENST00000548097 TREML4Q6UXN2 200 aa13.2□□□□□ -0.3
KRT4-201ENST00000548097 TMEM116Q8NCL8 245 aa13.2□□□□□ -0.3
KRT4-201ENST00000548097 IGKV1D-37A0A075B6S9 117 aa13.2□□□□□ -0.3
KRT4-201ENST00000548097 HMSDA8MTL9 139 aa13.2□□□□□ -0.3
KRT4-201ENST00000548097 BMPR1BO00238 502 aa13.2□□□□□ -0.3
KRT4-201ENST00000548097 CTSGP08311 255 aa13.2□□□□□ -0.3
KRT4-201ENST00000548097 ZNF90Q03938 601 aa13.2□□□□□ -0.3
KRT4-201ENST00000548097 LGALSLQ3ZCW2 172 aaPredicted RBP13.2□□□□□ -0.3
KRT4-201ENST00000548097 RAX2Q96IS3 184 aa13.2□□□□□ -0.3
KRT4-201ENST00000548097 IGHV3OR16-8A0A075B7F1 116 aa13.19□□□□□ -0.3
KRT4-201ENST00000548097 ZFP92A6NM28 416 aa13.19□□□□□ -0.3
KRT4-201ENST00000548097 OR2C1O95371 312 aa13.19□□□□□ -0.3
KRT4-201ENST00000548097 IGLC1P0CG04 106 aa13.19□□□□□ -0.3
KRT4-201ENST00000548097 NPBWR1P48145 328 aa13.19□□□□□ -0.3
KRT4-201ENST00000548097 NDUFA11Q86Y39 141 aa13.19□□□□□ -0.3
KRT4-201ENST00000548097 UQCC1Q9NVA1 299 aa13.19□□□□□ -0.3
KRT4-201ENST00000548097 TGOLN2O43493 480 aa13.18□□□□□ -0.3
KRT4-201ENST00000548097 GATA2P23769 480 aaPredicted RBP13.18□□□□□ -0.3
KRT4-201ENST00000548097 OR10J1P30954 320 aa13.18□□□□□ -0.3
KRT4-201ENST00000548097 SLURP1P55000 103 aa13.18□□□□□ -0.3
KRT4-201ENST00000548097 TMEM182Q6ZP80 229 aaPredicted RBP13.18□□□□□ -0.3
KRT4-201ENST00000548097 ZNF414Q96IQ9 312 aa13.18□□□□□ -0.3
KRT4-201ENST00000548097 HYLS1Q96M11 299 aa13.18□□□□□ -0.3
KRT4-201ENST00000548097 ATP5SQ99766 215 aa13.18□□□□□ -0.3
KRT4-201ENST00000548097 TMEM147Q9BVK8 224 aa13.18□□□□□ -0.3
KRT4-201ENST00000548097 NPVFQ9HCQ7 196 aa13.18□□□□□ -0.3
KRT4-201ENST00000548097 IGKV1-17P01599 117 aa13.18□□□□□ -0.3
KRT4-201ENST00000548097 VWC2Q2TAL6 325 aa13.18□□□□□ -0.3
KRT4-201ENST00000548097 OR1N2Q8NGR9 330 aa13.18□□□□□ -0.3
KRT4-201ENST00000548097 GGACTQ9BVM4 153 aa13.18□□□□□ -0.3
KRT4-201ENST00000548097 RFNGQ9Y644 331 aa13.18□□□□□ -0.3
KRT4-201ENST00000548097 TRRAPQ9Y4A5 3859 aa13.17□□□□□ -0.3
KRT4-201ENST00000548097 NUPL2O15504 423 aaKnown RBP13.17□□□□□ -0.3
KRT4-201ENST00000548097 HSPB1P04792 205 aaKnown RBP13.17□□□□□ -0.3
KRT4-201ENST00000548097 FCGR2BP31994 310 aaPredicted RBP13.17□□□□□ -0.3
KRT4-201ENST00000548097 OR2F1Q13607 317 aa13.17□□□□□ -0.3
KRT4-201ENST00000548097 TMEM144Q7Z5S9 345 aa13.17□□□□□ -0.3
KRT4-201ENST00000548097 TXN2Q99757 166 aa13.17□□□□□ -0.3
KRT4-201ENST00000548097 CCL24O00175 119 aa13.16□□□□□ -0.3
KRT4-201ENST00000548097 FGF7P21781 194 aa13.16□□□□□ -0.3
KRT4-201ENST00000548097 HOXD3P31249 432 aaPredicted RBP13.16□□□□□ -0.3
KRT4-201ENST00000548097 ATP6V1FQ16864 119 aa13.16□□□□□ -0.3
KRT4-201ENST00000548097 RPL7L1Q6DKI1 246 aaKnown RBP13.16□□□□□ -0.3
KRT4-201ENST00000548097 LAMTOR1Q6IAA8 161 aa13.16□□□□□ -0.3
KRT4-201ENST00000548097 C9orf62Q8N4C0 152 aa13.16□□□□□ -0.3
KRT4-201ENST00000548097 KCNRGQ8N5I3 272 aa13.16□□□□□ -0.3
KRT4-201ENST00000548097 MGST2Q99735 147 aa13.16□□□□□ -0.3
KRT4-201ENST00000548097 ARL6Q9H0F7 186 aa13.16□□□□□ -0.3
KRT4-201ENST00000548097 LINC01619G3V211 115 aa13.16□□□□□ -0.3
KRT4-201ENST00000548097 RUNX1Q01196 453 aa13.16□□□□□ -0.3
KRT4-201ENST00000548097 TEPPQ6URK8 271 aa13.16□□□□□ -0.3
KRT4-201ENST00000548097 BTNL8Q6UX41 500 aa13.16□□□□□ -0.3
KRT4-201ENST00000548097 TMUB2Q71RG4 321 aa13.16□□□□□ -0.3
KRT4-201ENST00000548097 THAP8Q8NA92 274 aa13.16□□□□□ -0.3
KRT4-201ENST00000548097 DPF1Q92782 380 aa13.16□□□□□ -0.3
KRT4-201ENST00000548097 WDR83OSQ9Y284 106 aa13.16□□□□□ -0.3
KRT4-201ENST00000548097 BOLA1Q9Y3E2 137 aa13.16□□□□□ -0.3
KRT4-201ENST00000548097 LSM4Q9Y4Z0 139 aaKnown RBP13.16□□□□□ -0.3
KRT4-201ENST00000548097 GGCTO75223 188 aaKnown RBP13.15□□□□□ -0.3
KRT4-201ENST00000548097 ZNF616Q08AN1 781 aa13.15□□□□□ -0.3
KRT4-201ENST00000548097 ZNF345Q14585 488 aa13.15□□□□□ -0.3
KRT4-201ENST00000548097 NDUFA5Q16718 116 aa13.15□□□□□ -0.3
KRT4-201ENST00000548097 RPEL1Q2QD12 228 aa13.15□□□□□ -0.3
KRT4-201ENST00000548097 UNQ9165/PRO28630Q6UXU0 137 aa13.15□□□□□ -0.3
KRT4-201ENST00000548097 SPATA3Q8NHX4 192 aa13.15□□□□□ -0.3
KRT4-201ENST00000548097 RCC1LQ96I51 464 aaKnown RBP13.15□□□□□ -0.3
KRT4-201ENST00000548097 CYTL1Q9NRR1 136 aa13.15□□□□□ -0.3
KRT4-201ENST00000548097 WNK1Q9H4A3 2382 aa13.15□□□□□ -0.31
KRT4-201ENST00000548097 FNDC10F2Z333 226 aa13.14□□□□□ -0.31
KRT4-201ENST00000548097 AGPAT2O15120 278 aa13.14□□□□□ -0.31
KRT4-201ENST00000548097 YIF1AO95070 293 aa13.14□□□□□ -0.31
KRT4-201ENST00000548097 SCAF4O95104 1147 aaKnown RBP13.14□□□□□ -0.31
KRT4-201ENST00000548097 SHISA2Q6UWI4 295 aa13.14□□□□□ -0.31
KRT4-201ENST00000548097 RSG1Q9BU20 258 aa13.14□□□□□ -0.31
KRT4-201ENST00000548097 WDR61Q9GZS3 305 aaKnown RBP13.14□□□□□ -0.31
KRT4-201ENST00000548097 PUS1Q9Y606 427 aaKnown RBP eCLIP13.14□□□□□ -0.31
KRT4-201ENST00000548097 A0A0D9SG52 128 aa13.13□□□□□ -0.31
KRT4-201ENST00000548097 ZNF207O43670 478 aaKnown RBP13.13□□□□□ -0.31
KRT4-201ENST00000548097 DFFBO76075 338 aa13.13□□□□□ -0.31
KRT4-201ENST00000548097 TSPAN15O95858 294 aa13.13□□□□□ -0.31
KRT4-201ENST00000548097 PSG1P11464 419 aa13.13□□□□□ -0.31
KRT4-201ENST00000548097 EDN2P20800 178 aa13.13□□□□□ -0.31
KRT4-201ENST00000548097 SYNJ2BPP57105 145 aa13.13□□□□□ -0.31
KRT4-201ENST00000548097 HSD17B11Q8NBQ5 300 aa13.13□□□□□ -0.31
KRT4-201ENST00000548097 DLX4Q92988 240 aaPredicted RBP13.13□□□□□ -0.31
KRT4-201ENST00000548097 ARPC5LQ9BPX5 153 aa13.13□□□□□ -0.31
KRT4-201ENST00000548097 GAR1Q9NY12 217 aaKnown RBP13.13□□□□□ -0.31
KRT4-201ENST00000548097 VWFP04275 2813 aa13.13□□□□□ -0.31
KRT4-201ENST00000548097 TRAV30A0A087WSZ9 112 aa13.13□□□□□ -0.31
KRT4-201ENST00000548097 ZNF320A2RRD8 509 aa13.13□□□□□ -0.31
KRT4-201ENST00000548097 CAMLGP49069 296 aa13.13□□□□□ -0.31
KRT4-201ENST00000548097 FAM209BQ5JX69 171 aa13.13□□□□□ -0.31
KRT4-201ENST00000548097 SPSB3Q6PJ21 355 aa13.13□□□□□ -0.31
KRT4-201ENST00000548097 CYP2G1PQ6ZSU1 146 aa13.13□□□□□ -0.31
KRT4-201ENST00000548097 BPIFCQ8NFQ6 507 aa13.13□□□□□ -0.31
KRT4-201ENST00000548097 TRGV9Q99603 122 aa13.13□□□□□ -0.31
KRT4-201ENST00000548097 C20orf24Q9BUV8 137 aa13.13□□□□□ -0.31
KRT4-201ENST00000548097 NPCDR1Q9BY65 106 aa13.13□□□□□ -0.31
KRT4-201ENST00000548097 ANK2Q01484 3957 aa13.12□□□□□ -0.31
KRT4-201ENST00000548097 BCL2L11O43521 198 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms