RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 CHEK1O14757 476 aa14.05□□□□□ -0.16
PRPF40B-206ENST00000547764 H2AFB2P0C5Z0 115 aa14.05□□□□□ -0.16
PRPF40B-206ENST00000547764 IGLC1P0CG04 106 aa14.05□□□□□ -0.16
PRPF40B-206ENST00000547764 ID3Q02535 119 aa14.05□□□□□ -0.16
PRPF40B-206ENST00000547764 SLC16A13Q7RTY0 426 aa14.05□□□□□ -0.16
PRPF40B-206ENST00000547764 OR4D5Q8NGN0 318 aa14.05□□□□□ -0.16
PRPF40B-206ENST00000547764 NPIPB3Q92617 1050 aa14.05□□□□□ -0.16
PRPF40B-206ENST00000547764 CIB3Q96Q77 187 aaPredicted RBP14.05□□□□□ -0.16
PRPF40B-206ENST00000547764 GINS3Q9BRX5 216 aa14.05□□□□□ -0.16
PRPF40B-206ENST00000547764 RHPN1-AS1Q9BWJ2 59 aa14.05□□□□□ -0.16
PRPF40B-206ENST00000547764 IGHV3OR16-13A0A075B7E8 117 aa14.04□□□□□ -0.16
PRPF40B-206ENST00000547764 IGHV3-74A0A0B4J1X5 117 aa14.04□□□□□ -0.16
PRPF40B-206ENST00000547764 WRBO00258 174 aa14.04□□□□□ -0.16
PRPF40B-206ENST00000547764 OR10J1P30954 320 aa14.04□□□□□ -0.16
PRPF40B-206ENST00000547764 LAMTOR1Q6IAA8 161 aa14.04□□□□□ -0.16
PRPF40B-206ENST00000547764 OR1S2Q8NGQ3 325 aa14.04□□□□□ -0.16
PRPF40B-206ENST00000547764 ACY3Q96HD9 319 aa14.04□□□□□ -0.16
PRPF40B-206ENST00000547764 RNF2Q99496 336 aa14.04□□□□□ -0.16
PRPF40B-206ENST00000547764 SEC22CQ9BRL7 303 aa14.04□□□□□ -0.16
PRPF40B-206ENST00000547764 TUBA4BQ9H853 241 aa14.04□□□□□ -0.16
PRPF40B-206ENST00000547764 TSPAN4O14817 238 aa14.03□□□□□ -0.16
PRPF40B-206ENST00000547764 GPX4P36969 197 aaPredicted RBP14.03□□□□□ -0.16
PRPF40B-206ENST00000547764 NKX2-1P43699 371 aaPredicted RBP14.03□□□□□ -0.16
PRPF40B-206ENST00000547764 POLR2GP62487 172 aaKnown RBP eCLIP14.03□□□□□ -0.16
PRPF40B-206ENST00000547764 RAB11AP62491 216 aa14.03□□□□□ -0.16
PRPF40B-206ENST00000547764 IAH1Q2TAA2 248 aaPredicted RBP14.03□□□□□ -0.16
PRPF40B-206ENST00000547764 ZNF431Q8TF32 576 aaPredicted RBP14.03□□□□□ -0.16
PRPF40B-206ENST00000547764 SPAG8Q99932 426 aaPredicted RBP14.03□□□□□ -0.16
PRPF40B-206ENST00000547764 WFDC10AQ9H1F0 79 aa14.03□□□□□ -0.16
PRPF40B-206ENST00000547764 PAIP2BQ9ULR5 123 aaKnown RBP14.03□□□□□ -0.16
PRPF40B-206ENST00000547764 HUWE1Q7Z6Z7 4374 aaKnown RBP14.02□□□□□ -0.16
PRPF40B-206ENST00000547764 OR11H12B2RN74 326 aa14.02□□□□□ -0.17
PRPF40B-206ENST00000547764 APOHP02749 345 aaPredicted RBP14.02□□□□□ -0.17
PRPF40B-206ENST00000547764 YPEL3P61236 119 aaPredicted RBP14.02□□□□□ -0.17
PRPF40B-206ENST00000547764 RPP30P78346 268 aaKnown RBP14.02□□□□□ -0.17
PRPF40B-206ENST00000547764 DEFB125Q8N687 156 aa14.02□□□□□ -0.17
PRPF40B-206ENST00000547764 GAMTQ14353 236 aa14.01□□□□□ -0.17
PRPF40B-206ENST00000547764 SPANXN5Q5MJ07 72 aa14.01□□□□□ -0.17
PRPF40B-206ENST00000547764 ZBTB8BQ8NAP8 495 aaPredicted RBP14.01□□□□□ -0.17
PRPF40B-206ENST00000547764 ENKURQ8TC29 256 aa14.01□□□□□ -0.17
PRPF40B-206ENST00000547764 Q8WTZ3 238 aa14.01□□□□□ -0.17
PRPF40B-206ENST00000547764 ST8SIA2Q92186 375 aa14.01□□□□□ -0.17
PRPF40B-206ENST00000547764 VSIRQ9H7M9 311 aa14.01□□□□□ -0.17
PRPF40B-206ENST00000547764 H3BP45 60 aa14□□□□□ -0.17
PRPF40B-206ENST00000547764 CCSO14618 274 aa14□□□□□ -0.17
PRPF40B-206ENST00000547764 NPPCP23582 126 aa14□□□□□ -0.17
PRPF40B-206ENST00000547764 LILRB2Q8N423 598 aa14□□□□□ -0.17
PRPF40B-206ENST00000547764 C12orf45Q8N5I9 185 aaPredicted RBP14□□□□□ -0.17
PRPF40B-206ENST00000547764 SLC35E1Q96K37 410 aa14□□□□□ -0.17
PRPF40B-206ENST00000547764 METTL26Q96S19 204 aa14□□□□□ -0.17
PRPF40B-206ENST00000547764 GSKIPQ9P0R6 139 aa14□□□□□ -0.17
PRPF40B-206ENST00000547764 IGHV3-66A0A0C4DH42 116 aa13.99□□□□□ -0.17
PRPF40B-206ENST00000547764 SSSCA1O60232 199 aa13.99□□□□□ -0.17
PRPF40B-206ENST00000547764 SCGB1D2O95969 90 aa13.99□□□□□ -0.17
PRPF40B-206ENST00000547764 CRYBB3P26998 211 aa13.99□□□□□ -0.17
PRPF40B-206ENST00000547764 BMI1P35226 326 aa13.99□□□□□ -0.17
PRPF40B-206ENST00000547764 FAM90A2PQ658T7 463 aa13.99□□□□□ -0.17
PRPF40B-206ENST00000547764 SRD5A3Q9H8P0 318 aa13.99□□□□□ -0.17
PRPF40B-206ENST00000547764 PSENENQ9NZ42 101 aa13.99□□□□□ -0.17
PRPF40B-206ENST00000547764 STRAPQ9Y3F4 350 aaKnown RBP13.99□□□□□ -0.17
PRPF40B-206ENST00000547764 U3KQK5 164 aa13.99□□□□□ -0.17
PRPF40B-206ENST00000547764 PRSS46E5RG02 174 aa13.98□□□□□ -0.17
PRPF40B-206ENST00000547764 TOMM40O96008 361 aa13.98□□□□□ -0.17
PRPF40B-206ENST00000547764 IL5P05113 134 aa13.98□□□□□ -0.17
PRPF40B-206ENST00000547764 RD3LP0DJH9 198 aa13.98□□□□□ -0.17
PRPF40B-206ENST00000547764 LINC00322Q6ZN03 302 aaPredicted RBP13.98□□□□□ -0.17
PRPF40B-206ENST00000547764 TCF24Q7RTU0 167 aa13.98□□□□□ -0.17
PRPF40B-206ENST00000547764 NRARPQ7Z6K4 114 aa13.98□□□□□ -0.17
PRPF40B-206ENST00000547764 SMIM8Q96KF7 97 aa13.98□□□□□ -0.17
PRPF40B-206ENST00000547764 IGKV3-7A0A075B6H7 116 aa13.97□□□□□ -0.17
PRPF40B-206ENST00000547764 IGKV1D-37A0A075B6S9 117 aa13.97□□□□□ -0.17
PRPF40B-206ENST00000547764 RBMY1BA6NDE4 496 aaKnown RBP13.97□□□□□ -0.17
PRPF40B-206ENST00000547764 RBMY1EA6NEQ0 496 aaKnown RBP13.97□□□□□ -0.17
PRPF40B-206ENST00000547764 OR4C46A6NHA9 309 aa13.97□□□□□ -0.17
PRPF40B-206ENST00000547764 ZFP92A6NM28 416 aa13.97□□□□□ -0.17
PRPF40B-206ENST00000547764 FAM25EA8MYX2 175 aa13.97□□□□□ -0.17
PRPF40B-206ENST00000547764 DFFBO76075 338 aa13.97□□□□□ -0.17
PRPF40B-206ENST00000547764 RBMY1DP0C7P1 496 aaKnown RBP13.97□□□□□ -0.17
PRPF40B-206ENST00000547764 PSG1P11464 419 aa13.97□□□□□ -0.17
PRPF40B-206ENST00000547764 PAX9P55771 341 aa13.97□□□□□ -0.17
PRPF40B-206ENST00000547764 HAGHQ16775 308 aa13.97□□□□□ -0.17
PRPF40B-206ENST00000547764 TM2D3Q9BRN9 247 aa13.97□□□□□ -0.17
PRPF40B-206ENST00000547764 A0A1W2PS18 150 aa13.96□□□□□ -0.17
PRPF40B-206ENST00000547764 MBPP02686 304 aaPredicted RBP13.96□□□□□ -0.17
PRPF40B-206ENST00000547764 IL4P05112 153 aa13.96□□□□□ -0.17
PRPF40B-206ENST00000547764 CD5P06127 495 aa13.96□□□□□ -0.17
PRPF40B-206ENST00000547764 TFPI2P48307 235 aa13.96□□□□□ -0.17
PRPF40B-206ENST00000547764 ZNF90Q03938 601 aa13.96□□□□□ -0.17
PRPF40B-206ENST00000547764 USF2Q15853 346 aaPredicted RBP13.96□□□□□ -0.17
PRPF40B-206ENST00000547764 GBGT1Q8N5D6 347 aa13.96□□□□□ -0.17
PRPF40B-206ENST00000547764 RAB40CQ96S21 281 aa13.96□□□□□ -0.17
PRPF40B-206ENST00000547764 TMEM231Q9H6L2 316 aa13.96□□□□□ -0.17
PRPF40B-206ENST00000547764 UBQLN2Q9UHD9 624 aa13.96□□□□□ -0.17
PRPF40B-206ENST00000547764 RCL1Q9Y2P8 373 aaKnown RBP13.96□□□□□ -0.17
PRPF40B-206ENST00000547764 C5orf51A6NDU8 294 aa13.95□□□□□ -0.18
PRPF40B-206ENST00000547764 DEFA1P59665 94 aa13.95□□□□□ -0.18
PRPF40B-206ENST00000547764 DEFA3P59666 94 aa13.95□□□□□ -0.18
PRPF40B-206ENST00000547764 ODF3L2Q3SX64 289 aa13.95□□□□□ -0.18
PRPF40B-206ENST00000547764 NARS2Q96I59 477 aaKnown RBP13.95□□□□□ -0.18
PRPF40B-206ENST00000547764 CITED4Q96RK1 184 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms