RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 IGHV1-18A0A0C4DH31 117 aa10.1□□□□□ -0.79
NPC1L1-204ENST00000546276 IL18BPO95998 194 aa10.1□□□□□ -0.79
NPC1L1-204ENST00000546276 ATP5G2Q06055 141 aa10.1□□□□□ -0.79
NPC1L1-204ENST00000546276 LDLRAD2Q5SZI1 272 aa10.1□□□□□ -0.79
NPC1L1-204ENST00000546276 HBDP02042 147 aa10.09□□□□□ -0.79
NPC1L1-204ENST00000546276 PAX9P55771 341 aa10.09□□□□□ -0.79
NPC1L1-204ENST00000546276 KIR2DL4Q99706 377 aa10.09□□□□□ -0.79
NPC1L1-204ENST00000546276 APC2O95996 2303 aa10.09□□□□□ -0.79
NPC1L1-204ENST00000546276 GFRA3O60609 400 aa10.09□□□□□ -0.79
NPC1L1-204ENST00000546276 APOBEC3AP31941 199 aaPredicted RBP10.09□□□□□ -0.79
NPC1L1-204ENST00000546276 MS4A6AQ9H2W1 248 aa10.09□□□□□ -0.79
NPC1L1-204ENST00000546276 PSG8Q9UQ74 426 aa10.09□□□□□ -0.79
NPC1L1-204ENST00000546276 IGHV3-23P01764 117 aa10.09□□□□□ -0.79
NPC1L1-204ENST00000546276 PVRIGQ6DKI7 326 aa10.09□□□□□ -0.79
NPC1L1-204ENST00000546276 OR5AN1Q8NGI8 311 aa10.09□□□□□ -0.79
NPC1L1-204ENST00000546276 HS3ST6Q96QI5 342 aa10.09□□□□□ -0.79
NPC1L1-204ENST00000546276 MRPL16Q9NX20 251 aaKnown RBP10.09□□□□□ -0.79
NPC1L1-204ENST00000546276 RPUSD1Q9UJJ7 312 aaKnown RBP10.09□□□□□ -0.79
NPC1L1-204ENST00000546276 RAXQ9Y2V3 346 aa10.09□□□□□ -0.79
NPC1L1-204ENST00000546276 KLF2Q9Y5W3 355 aaPredicted RBP10.09□□□□□ -0.79
NPC1L1-204ENST00000546276 IGHV3OR16-13A0A075B7E8 117 aa10.08□□□□□ -0.8
NPC1L1-204ENST00000546276 IGHV3-74A0A0B4J1X5 117 aa10.08□□□□□ -0.8
NPC1L1-204ENST00000546276 IGKV1D-33P01593 117 aa10.08□□□□□ -0.8
NPC1L1-204ENST00000546276 IGKV1-33P01594 117 aa10.08□□□□□ -0.8
NPC1L1-204ENST00000546276 TSPOP30536 169 aa10.08□□□□□ -0.8
NPC1L1-204ENST00000546276 ARL6IP6Q8N6S5 226 aa10.08□□□□□ -0.8
NPC1L1-204ENST00000546276 FNDC4Q9H6D8 234 aaPredicted RBP10.08□□□□□ -0.8
NPC1L1-204ENST00000546276 FBXL7Q9UJT9 491 aa10.08□□□□□ -0.8
NPC1L1-204ENST00000546276 SEC11AP67812 179 aa10.08□□□□□ -0.8
NPC1L1-204ENST00000546276 BSPH1Q075Z2 132 aa10.08□□□□□ -0.8
NPC1L1-204ENST00000546276 MTURNQ8N3F0 131 aa10.08□□□□□ -0.8
NPC1L1-204ENST00000546276 CD177Q8N6Q3 437 aa10.08□□□□□ -0.8
NPC1L1-204ENST00000546276 ORAOV1Q8WV07 137 aa10.08□□□□□ -0.8
NPC1L1-204ENST00000546276 COQ2Q96H96 371 aa10.08□□□□□ -0.8
NPC1L1-204ENST00000546276 CRIM1Q9NZV1 1036 aa10.08□□□□□ -0.8
NPC1L1-204ENST00000546276 MRPL27Q9P0M9 148 aaKnown RBP10.08□□□□□ -0.8
NPC1L1-204ENST00000546276 METRNQ9UJH8 293 aa10.08□□□□□ -0.8
NPC1L1-204ENST00000546276 POLR3KQ9Y2Y1 108 aaPredicted RBP10.08□□□□□ -0.8
NPC1L1-204ENST00000546276 LRRK1Q38SD2 2015 aa10.08□□□□□ -0.8
NPC1L1-204ENST00000546276 A0A1B0GV72 72 aa10.08□□□□□ -0.8
NPC1L1-204ENST00000546276 A0A1B0GWB2 263 aa10.08□□□□□ -0.8
NPC1L1-204ENST00000546276 NPIPB6E9PJ23 425 aa10.08□□□□□ -0.8
NPC1L1-204ENST00000546276 PRSS2P07478 247 aa10.08□□□□□ -0.8
NPC1L1-204ENST00000546276 LCN12Q6JVE5 192 aa10.08□□□□□ -0.8
NPC1L1-204ENST00000546276 PLXND1Q9Y4D7 1925 aa10.08□□□□□ -0.8
NPC1L1-204ENST00000546276 LEPP41159 167 aa10.08□□□□□ -0.8
NPC1L1-204ENST00000546276 RNF125Q96EQ8 232 aa10.08□□□□□ -0.8
NPC1L1-204ENST00000546276 SCGB3A1Q96QR1 104 aa10.08□□□□□ -0.8
NPC1L1-204ENST00000546276 FANCMQ8IYD8 2048 aa10.07□□□□□ -0.8
NPC1L1-204ENST00000546276 GVINP1Q7Z2Y8 2422 aa10.07□□□□□ -0.8
NPC1L1-204ENST00000546276 CACNG7P62955 275 aa10.07□□□□□ -0.8
NPC1L1-204ENST00000546276 Q0VFX4 171 aa10.07□□□□□ -0.8
NPC1L1-204ENST00000546276 PPP1R27Q86WC6 154 aa10.07□□□□□ -0.8
NPC1L1-204ENST00000546276 C8orf46Q8TAG6 207 aa10.07□□□□□ -0.8
NPC1L1-204ENST00000546276 C20orf144Q9BQM9 153 aa10.07□□□□□ -0.8
NPC1L1-204ENST00000546276 M0R381 172 aa10.07□□□□□ -0.8
NPC1L1-204ENST00000546276 LYPD6BQ8NI32 183 aa10.07□□□□□ -0.8
NPC1L1-204ENST00000546276 ARPC1AQ92747 370 aa10.07□□□□□ -0.8
NPC1L1-204ENST00000546276 SELLP14151 372 aa10.07□□□□□ -0.8
NPC1L1-204ENST00000546276 ZNF726P1Q15940 193 aa10.07□□□□□ -0.8
NPC1L1-204ENST00000546276 COLCA1Q6ZS62 124 aa10.07□□□□□ -0.8
NPC1L1-204ENST00000546276 TMEM133Q9H2Q1 129 aa10.07□□□□□ -0.8
NPC1L1-204ENST00000546276 PPP1R17O96001 155 aa10.06□□□□□ -0.8
NPC1L1-204ENST00000546276 FABP5P3A8MUU1 101 aa10.06□□□□□ -0.8
NPC1L1-204ENST00000546276 LINC00205P59089 165 aa10.06□□□□□ -0.8
NPC1L1-204ENST00000546276 Q0VG73 95 aa10.06□□□□□ -0.8
NPC1L1-204ENST00000546276 SLC25A48Q6ZT89 311 aaKnown RBP10.06□□□□□ -0.8
NPC1L1-204ENST00000546276 NUP35Q8NFH5 326 aa10.06□□□□□ -0.8
NPC1L1-204ENST00000546276 MBNL3Q9NUK0 354 aaKnown RBP10.06□□□□□ -0.8
NPC1L1-204ENST00000546276 TYMSP04818 313 aa10.06□□□□□ -0.8
NPC1L1-204ENST00000546276 C10orf55Q5SWW7 151 aa10.06□□□□□ -0.8
NPC1L1-204ENST00000546276 AMMECR1LQ6DCA0 310 aa10.06□□□□□ -0.8
NPC1L1-204ENST00000546276 OR5A1Q8NGJ0 315 aa10.06□□□□□ -0.8
NPC1L1-204ENST00000546276 SNHG12Q9BXW3 62 aa10.06□□□□□ -0.8
NPC1L1-204ENST00000546276 COL4A6Q14031 1691 aa10.06□□□□□ -0.8
NPC1L1-204ENST00000546276 KIAA2026Q5HYC2 2103 aa10.06□□□□□ -0.8
NPC1L1-204ENST00000546276 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.05□□□□□ -0.8
NPC1L1-204ENST00000546276 OR2K2Q8NGT1 345 aa10.05□□□□□ -0.8
NPC1L1-204ENST00000546276 RNF166Q96A37 237 aaPredicted RBP10.05□□□□□ -0.8
NPC1L1-204ENST00000546276 PRDM6Q9NQX0 595 aa10.05□□□□□ -0.8
NPC1L1-204ENST00000546276 IGHV3-49A0A0A0MS15 119 aa10.05□□□□□ -0.8
NPC1L1-204ENST00000546276 IGHV3-66A0A0C4DH42 116 aa10.05□□□□□ -0.8
NPC1L1-204ENST00000546276 PPBPP02775 128 aa10.05□□□□□ -0.8
NPC1L1-204ENST00000546276 ASIPP42127 132 aa10.05□□□□□ -0.8
NPC1L1-204ENST00000546276 HSD52Q0P140 79 aa10.05□□□□□ -0.8
NPC1L1-204ENST00000546276 ANAPC1Q9H1A4 1944 aa10.05□□□□□ -0.8
NPC1L1-204ENST00000546276 NBR2O15453 112 aa10.05□□□□□ -0.8
NPC1L1-204ENST00000546276 IGHV1-46P01743 117 aa10.05□□□□□ -0.8
NPC1L1-204ENST00000546276 TMEM170BQ5T4T1 132 aa10.05□□□□□ -0.8
NPC1L1-204ENST00000546276 FAM159AQ6UWV7 190 aa10.05□□□□□ -0.8
NPC1L1-204ENST00000546276 FAM57AQ8TBR7 257 aa10.05□□□□□ -0.8
NPC1L1-204ENST00000546276 IFI27L1Q96BM0 104 aa10.05□□□□□ -0.8
NPC1L1-204ENST00000546276 NXT2Q9NPJ8 142 aaKnown RBP10.05□□□□□ -0.8
NPC1L1-204ENST00000546276 NHP2Q9NX24 153 aaKnown RBP10.05□□□□□ -0.8
NPC1L1-204ENST00000546276 SMAGPQ0VAQ4 97 aa10.05□□□□□ -0.8
NPC1L1-204ENST00000546276 FAM106AQ4KMX7 169 aa10.05□□□□□ -0.8
NPC1L1-204ENST00000546276 PAPPA-AS1Q5QFB9 102 aa10.05□□□□□ -0.8
NPC1L1-204ENST00000546276 FAM74A4Q5TZK3 123 aa10.05□□□□□ -0.8
NPC1L1-204ENST00000546276 A0A1B0GUS0 222 aa10.04□□□□□ -0.8
NPC1L1-204ENST00000546276 ZNF56Q15929 161 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms