RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 CHCHD1Q96BP2 118 aaKnown RBP7.08□□□□□ -1.28
TDP1-204ENST00000545686 LINC00479Q96M42 142 aa7.08□□□□□ -1.28
TDP1-204ENST00000545686 MRPL20Q9BYC9 149 aaKnown RBP7.08□□□□□ -1.28
TDP1-204ENST00000545686 ASCL3Q9NQ33 180 aa7.08□□□□□ -1.28
TDP1-204ENST00000545686 ZNF492Q9P255 531 aa7.08□□□□□ -1.28
TDP1-204ENST00000545686 IGKV1D-37A0A075B6S9 117 aa7.07□□□□□ -1.28
TDP1-204ENST00000545686 NKX6-3A6NJ46 265 aa7.07□□□□□ -1.28
TDP1-204ENST00000545686 LCN12Q6JVE5 192 aa7.07□□□□□ -1.28
TDP1-204ENST00000545686 PATE2Q6UY27 113 aa7.07□□□□□ -1.28
TDP1-204ENST00000545686 OR4F17Q8NGA8 305 aa7.07□□□□□ -1.28
TDP1-204ENST00000545686 TMEM190Q8WZ59 177 aa7.07□□□□□ -1.28
TDP1-204ENST00000545686 PERPQ96FX8 193 aa7.07□□□□□ -1.28
TDP1-204ENST00000545686 CCL13Q99616 98 aa7.07□□□□□ -1.28
TDP1-204ENST00000545686 TMEM70Q9BUB7 260 aa7.07□□□□□ -1.28
TDP1-204ENST00000545686 GFRA4Q9GZZ7 299 aa7.07□□□□□ -1.28
TDP1-204ENST00000545686 ST20Q9HBF5 79 aa7.07□□□□□ -1.28
TDP1-204ENST00000545686 EPDR1Q9UM22 224 aa7.07□□□□□ -1.28
TDP1-204ENST00000545686 IGLC7A0M8Q6 106 aa7.07□□□□□ -1.28
TDP1-204ENST00000545686 A8MWL6 223 aa7.07□□□□□ -1.28
TDP1-204ENST00000545686 IGHV1-46P01743 117 aa7.07□□□□□ -1.28
TDP1-204ENST00000545686 REG1BP48304 166 aa7.07□□□□□ -1.28
TDP1-204ENST00000545686 PTTG1IPP53801 180 aa7.07□□□□□ -1.28
TDP1-204ENST00000545686 UBE2V1Q13404 147 aa7.07□□□□□ -1.28
TDP1-204ENST00000545686 Q56UQ5 140 aa7.07□□□□□ -1.28
TDP1-204ENST00000545686 LEMD1Q68G75 181 aa7.07□□□□□ -1.28
TDP1-204ENST00000545686 ATOH7Q8N100 152 aa7.07□□□□□ -1.28
TDP1-204ENST00000545686 FAM216BQ8N7L0 139 aa7.07□□□□□ -1.28
TDP1-204ENST00000545686 C8orf31Q8N9H6 132 aa7.07□□□□□ -1.28
TDP1-204ENST00000545686 OR4C13Q8NGP0 309 aa7.07□□□□□ -1.28
TDP1-204ENST00000545686 FLYWCH2Q96CP2 140 aaKnown RBP7.07□□□□□ -1.28
TDP1-204ENST00000545686 FMC1Q96HJ9 113 aa7.07□□□□□ -1.28
TDP1-204ENST00000545686 GPR82Q96P67 336 aa7.07□□□□□ -1.28
TDP1-204ENST00000545686 MLST8Q9BVC4 326 aa7.07□□□□□ -1.28
TDP1-204ENST00000545686 RPP21Q9H633 154 aaKnown RBP7.07□□□□□ -1.28
TDP1-204ENST00000545686 FNDC4Q9H6D8 234 aaPredicted RBP7.07□□□□□ -1.28
TDP1-204ENST00000545686 TRAV34A0A0B4J273 112 aa7.06□□□□□ -1.28
TDP1-204ENST00000545686 FAM231BA6NCW3 169 aa7.06□□□□□ -1.28
TDP1-204ENST00000545686 IGLL1P15814 213 aa7.06□□□□□ -1.28
TDP1-204ENST00000545686 CCL11P51671 97 aa7.06□□□□□ -1.28
TDP1-204ENST00000545686 WT1-ASQ06250 92 aa7.06□□□□□ -1.28
TDP1-204ENST00000545686 ETFRF1Q6IPR1 90 aa7.06□□□□□ -1.28
TDP1-204ENST00000545686 ZCCHC24Q8N2G6 241 aaKnown RBP7.06□□□□□ -1.28
TDP1-204ENST00000545686 RBMXL3Q8N7X1 1067 aaKnown RBP7.06□□□□□ -1.28
TDP1-204ENST00000545686 OR10X1Q8NGY0 326 aa7.06□□□□□ -1.28
TDP1-204ENST00000545686 RND1Q92730 232 aa7.06□□□□□ -1.28
TDP1-204ENST00000545686 PRSS22Q9GZN4 317 aa7.06□□□□□ -1.28
TDP1-204ENST00000545686 NBEAQ8NFP9 2946 aa7.06□□□□□ -1.28
TDP1-204ENST00000545686 PLCE1Q9P212 2302 aa7.06□□□□□ -1.28
TDP1-204ENST00000545686 K7EP13 123 aa7.06□□□□□ -1.28
TDP1-204ENST00000545686 CCL25O15444 150 aa7.06□□□□□ -1.28
TDP1-204ENST00000545686 SLC25A5P05141 298 aaKnown RBP7.06□□□□□ -1.28
TDP1-204ENST00000545686 HINT1P49773 126 aaPredicted RBP7.06□□□□□ -1.28
TDP1-204ENST00000545686 SSBP2P81877 361 aaPredicted RBP7.06□□□□□ -1.28
TDP1-204ENST00000545686 MAJINQ3KP22 176 aa7.06□□□□□ -1.28
TDP1-204ENST00000545686 FAM120AOSQ5T036 256 aa7.06□□□□□ -1.28
TDP1-204ENST00000545686 PVRIGQ6DKI7 326 aa7.06□□□□□ -1.28
TDP1-204ENST00000545686 PRR27Q6MZM9 219 aa7.06□□□□□ -1.28
TDP1-204ENST00000545686 VHLLQ6RSH7 139 aa7.06□□□□□ -1.28
TDP1-204ENST00000545686 ZNF841Q6ZN19 808 aa7.06□□□□□ -1.28
TDP1-204ENST00000545686 SEM1Q6ZVN7 128 aa7.06□□□□□ -1.28
TDP1-204ENST00000545686 LINC00305Q7Z4B0 112 aa7.06□□□□□ -1.28
TDP1-204ENST00000545686 LINC00311Q8N616 119 aa7.06□□□□□ -1.28
TDP1-204ENST00000545686 C5orf17Q8NAS9 161 aa7.06□□□□□ -1.28
TDP1-204ENST00000545686 NPIPB3Q92617 1050 aa7.06□□□□□ -1.28
TDP1-204ENST00000545686 PPIAL4AQ9Y536 164 aa7.06□□□□□ -1.28
TDP1-204ENST00000545686 PRRC2CQ9Y520 2896 aaKnown RBP7.06□□□□□ -1.28
TDP1-204ENST00000545686 CGB1A6NKQ9 187 aa7.05□□□□□ -1.28
TDP1-204ENST00000545686 SP9P0CG40 484 aa7.05□□□□□ -1.28
TDP1-204ENST00000545686 CAMPP49913 170 aa7.05□□□□□ -1.28
TDP1-204ENST00000545686 DEFB108BQ8NET1 73 aa7.05□□□□□ -1.28
TDP1-204ENST00000545686 URB1-AS1Q96HZ7 61 aa7.05□□□□□ -1.28
TDP1-204ENST00000545686 TRGV9Q99603 122 aa7.05□□□□□ -1.28
TDP1-204ENST00000545686 SSBP4Q9BWG4 385 aaPredicted RBP7.05□□□□□ -1.28
TDP1-204ENST00000545686 C19orf71A6NCJ1 209 aa7.05□□□□□ -1.28
TDP1-204ENST00000545686 VWC2LB2RUY7 222 aa7.05□□□□□ -1.28
TDP1-204ENST00000545686 LTAP01374 205 aa7.05□□□□□ -1.28
TDP1-204ENST00000545686 CRYGCP07315 174 aa7.05□□□□□ -1.28
TDP1-204ENST00000545686 OR5AL1P0C617 328 aa7.05□□□□□ -1.28
TDP1-204ENST00000545686 PAX2Q02962 417 aa7.05□□□□□ -1.28
TDP1-204ENST00000545686 ZNF474Q6S9Z5 364 aaPredicted RBP7.05□□□□□ -1.28
TDP1-204ENST00000545686 SSX8Q7RTT4 187 aa7.05□□□□□ -1.28
TDP1-204ENST00000545686 C22orf15Q8WYQ4 148 aa7.05□□□□□ -1.28
TDP1-204ENST00000545686 TMEM186Q96B77 213 aa7.05□□□□□ -1.28
TDP1-204ENST00000545686 ZNRD1Q9P1U0 126 aa7.05□□□□□ -1.28
TDP1-204ENST00000545686 WASHC3Q9Y3C0 194 aa7.05□□□□□ -1.28
TDP1-204ENST00000545686 DSPP15924 2871 aaKnown RBP7.05□□□□□ -1.28
TDP1-204ENST00000545686 IGHV2-70DA0A0C4DH43 119 aa7.04□□□□□ -1.28
TDP1-204ENST00000545686 OR4C46A6NHA9 309 aa7.04□□□□□ -1.28
TDP1-204ENST00000545686 E7EUB6 86 aa7.04□□□□□ -1.28
TDP1-204ENST00000545686 CORTO00230 105 aa7.04□□□□□ -1.28
TDP1-204ENST00000545686 NKX2-8O15522 239 aa7.04□□□□□ -1.28
TDP1-204ENST00000545686 IGLV2-23P01705 113 aa7.04□□□□□ -1.28
TDP1-204ENST00000545686 P01737 135 aa7.04□□□□□ -1.28
TDP1-204ENST00000545686 GPR6P46095 362 aaPredicted RBP7.04□□□□□ -1.28
TDP1-204ENST00000545686 ZNF137PP52743 207 aa7.04□□□□□ -1.28
TDP1-204ENST00000545686 GNG5P63218 68 aa7.04□□□□□ -1.28
TDP1-204ENST00000545686 VMA21Q3ZAQ7 101 aa7.04□□□□□ -1.28
TDP1-204ENST00000545686 LRRC10Q5BKY1 277 aa7.04□□□□□ -1.28
TDP1-204ENST00000545686 UNQ5815/PRO19632Q6UWF5 114 aa7.04□□□□□ -1.28
TDP1-204ENST00000545686 RBPMS2Q6ZRY4 209 aaKnown RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms