RNA–Protein interactions for RNA: ENST00000545279.5

SMAD5-211, Transcript of SMAD family member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD5, Length 7,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-211ENST00000545279 BAK1Q16611 211 aa5.28□□□□□ -1.56
SMAD5-211ENST00000545279 Q6YL49 198 aa5.28□□□□□ -1.56
SMAD5-211ENST00000545279 PSMG3Q9BT73 122 aaPredicted RBP5.28□□□□□ -1.56
SMAD5-211ENST00000545279 IGHV3OR16-8A0A075B7F1 116 aa5.28□□□□□ -1.56
SMAD5-211ENST00000545279 ZNF98A6NK75 572 aa5.28□□□□□ -1.56
SMAD5-211ENST00000545279 PAGE4O60829 102 aa5.28□□□□□ -1.56
SMAD5-211ENST00000545279 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.28□□□□□ -1.56
SMAD5-211ENST00000545279 IL36RNQ9UBH0 155 aa5.28□□□□□ -1.56
SMAD5-211ENST00000545279 IGKV1-9A0A0C4DH69 117 aa5.27□□□□□ -1.57
SMAD5-211ENST00000545279 LDLRAD4O15165 306 aa5.27□□□□□ -1.57
SMAD5-211ENST00000545279 CRXO43186 299 aaPredicted RBP5.27□□□□□ -1.57
SMAD5-211ENST00000545279 HOXD3P31249 432 aaPredicted RBP5.27□□□□□ -1.57
SMAD5-211ENST00000545279 IER3P46695 156 aa5.27□□□□□ -1.57
SMAD5-211ENST00000545279 TTC32Q5I0X7 151 aa5.27□□□□□ -1.57
SMAD5-211ENST00000545279 HIST2H2BCQ6DN03 193 aa5.27□□□□□ -1.57
SMAD5-211ENST00000545279 DHRS11Q6UWP2 260 aa5.27□□□□□ -1.57
SMAD5-211ENST00000545279 ANAPC16Q96DE5 110 aa5.27□□□□□ -1.57
SMAD5-211ENST00000545279 CLDN34H7C241 214 aa5.27□□□□□ -1.57
SMAD5-211ENST00000545279 C8orf86Q6ZUL3 223 aa5.27□□□□□ -1.57
SMAD5-211ENST00000545279 SEM1Q6ZVN7 128 aa5.27□□□□□ -1.57
SMAD5-211ENST00000545279 TRGV9Q99603 122 aa5.27□□□□□ -1.57
SMAD5-211ENST00000545279 C2orf88Q9BSF0 95 aa5.27□□□□□ -1.57
SMAD5-211ENST00000545279 EIF3GO75821 320 aaKnown RBP eCLIP5.27□□□□□ -1.57
SMAD5-211ENST00000545279 BSXQ3C1V8 233 aa5.27□□□□□ -1.57
SMAD5-211ENST00000545279 CDX1P47902 265 aaPredicted RBP5.27□□□□□ -1.57
SMAD5-211ENST00000545279 LYRM7Q5U5X0 104 aa5.27□□□□□ -1.57
SMAD5-211ENST00000545279 RNF152Q8N8N0 203 aa5.27□□□□□ -1.57
SMAD5-211ENST00000545279 OR8A1Q8NGG7 326 aa5.27□□□□□ -1.57
SMAD5-211ENST00000545279 FMC1Q96HJ9 113 aa5.27□□□□□ -1.57
SMAD5-211ENST00000545279 SPXQ9BT56 116 aa5.27□□□□□ -1.57
SMAD5-211ENST00000545279 PARP12Q9H0J9 701 aaKnown RBP5.27□□□□□ -1.57
SMAD5-211ENST00000545279 SVILO95425 2214 aa5.27□□□□□ -1.57
SMAD5-211ENST00000545279 B4DEV8 164 aa5.27□□□□□ -1.57
SMAD5-211ENST00000545279 ZNF324O75467 553 aaPredicted RBP5.27□□□□□ -1.57
SMAD5-211ENST00000545279 C1QBP02746 253 aa5.27□□□□□ -1.57
SMAD5-211ENST00000545279 CAMPP49913 170 aa5.27□□□□□ -1.57
SMAD5-211ENST00000545279 Q6ZS49 121 aa5.27□□□□□ -1.57
SMAD5-211ENST00000545279 DLX4Q92988 240 aaPredicted RBP5.27□□□□□ -1.57
SMAD5-211ENST00000545279 PNRC2Q9NPJ4 139 aaKnown RBP5.27□□□□□ -1.57
SMAD5-211ENST00000545279 ZFP30Q9Y2G7 519 aa5.27□□□□□ -1.57
SMAD5-211ENST00000545279 TOMM40O96008 361 aa5.27□□□□□ -1.57
SMAD5-211ENST00000545279 CD8AP01732 235 aa5.27□□□□□ -1.57
SMAD5-211ENST00000545279 Q6ZWC4 215 aa5.27□□□□□ -1.57
SMAD5-211ENST00000545279 AJUBAQ96IF1 538 aa5.27□□□□□ -1.57
SMAD5-211ENST00000545279 CITED2Q99967 270 aaPredicted RBP5.26□□□□□ -1.57
SMAD5-211ENST00000545279 NAPSAO96009 420 aa5.26□□□□□ -1.57
SMAD5-211ENST00000545279 Q6P435 159 aa5.26□□□□□ -1.57
SMAD5-211ENST00000545279 MRAP2Q96G30 205 aa5.26□□□□□ -1.57
SMAD5-211ENST00000545279 OR10C1Q96KK4 312 aa5.26□□□□□ -1.57
SMAD5-211ENST00000545279 TBX15Q96SF7 602 aa5.26□□□□□ -1.57
SMAD5-211ENST00000545279 IGHV7-4-1A0A0J9YVY3 117 aa5.26□□□□□ -1.57
SMAD5-211ENST00000545279 FGF8P55075 233 aaPredicted RBP5.26□□□□□ -1.57
SMAD5-211ENST00000545279 ZNF318Q5VUA4 2279 aa5.26□□□□□ -1.57
SMAD5-211ENST00000545279 M0R381 172 aa5.26□□□□□ -1.57
SMAD5-211ENST00000545279 PFN1P07737 140 aaKnown RBP5.26□□□□□ -1.57
SMAD5-211ENST00000545279 LMO4P61968 165 aa5.26□□□□□ -1.57
SMAD5-211ENST00000545279 SEC11AP67812 179 aa5.26□□□□□ -1.57
SMAD5-211ENST00000545279 TMEM183BQ1AE95 376 aa5.26□□□□□ -1.57
SMAD5-211ENST00000545279 MEIG1Q5JSS6 88 aa5.26□□□□□ -1.57
SMAD5-211ENST00000545279 TMEM183AQ8IXX5 376 aa5.26□□□□□ -1.57
SMAD5-211ENST00000545279 WIPF2Q8TF74 440 aaPredicted RBP5.26□□□□□ -1.57
SMAD5-211ENST00000545279 TANC1Q9C0D5 1861 aa5.26□□□□□ -1.57
SMAD5-211ENST00000545279 TGIF2-C20orf24A0A0A6YYL0 155 aa5.26□□□□□ -1.57
SMAD5-211ENST00000545279 H0Y8G0 127 aa5.26□□□□□ -1.57
SMAD5-211ENST00000545279 MT-ND6P03923 174 aa5.26□□□□□ -1.57
SMAD5-211ENST00000545279 OR5AL1P0C617 328 aa5.26□□□□□ -1.57
SMAD5-211ENST00000545279 ZNF833PQ6ZTB9 187 aa5.26□□□□□ -1.57
SMAD5-211ENST00000545279 ISOC2Q96AB3 205 aa5.26□□□□□ -1.57
SMAD5-211ENST00000545279 SIRPDQ9H106 197 aa5.26□□□□□ -1.57
SMAD5-211ENST00000545279 LIME1Q9H400 295 aa5.26□□□□□ -1.57
SMAD5-211ENST00000545279 MAP1LC3AQ9H492 121 aa5.26□□□□□ -1.57
SMAD5-211ENST00000545279 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.25□□□□□ -1.57
SMAD5-211ENST00000545279 IGKV1-12A0A0C4DH73 117 aa5.25□□□□□ -1.57
SMAD5-211ENST00000545279 IGKV1D-12P01611 117 aa5.25□□□□□ -1.57
SMAD5-211ENST00000545279 NTF4P34130 210 aa5.25□□□□□ -1.57
SMAD5-211ENST00000545279 RPL29P47914 159 aaKnown RBP5.25□□□□□ -1.57
SMAD5-211ENST00000545279 C11orf42Q8N5U0 333 aa5.25□□□□□ -1.57
SMAD5-211ENST00000545279 SLC35B3Q9H1N7 401 aa5.25□□□□□ -1.57
SMAD5-211ENST00000545279 XCL2Q9UBD3 114 aa5.25□□□□□ -1.57
SMAD5-211ENST00000545279 TRAV34A0A0B4J273 112 aa5.25□□□□□ -1.57
SMAD5-211ENST00000545279 FOXI2Q6ZQN5 318 aa5.25□□□□□ -1.57
SMAD5-211ENST00000545279 CFHR4Q92496 578 aa5.25□□□□□ -1.57
SMAD5-211ENST00000545279 NTF3P20783 257 aa5.25□□□□□ -1.57
SMAD5-211ENST00000545279 NUDT10Q8NFP7 164 aa5.25□□□□□ -1.57
SMAD5-211ENST00000545279 NUDT11Q96G61 164 aa5.25□□□□□ -1.57
SMAD5-211ENST00000545279 SOX21Q9Y651 276 aaPredicted RBP5.25□□□□□ -1.57
SMAD5-211ENST00000545279 PLXNA1Q9UIW2 1896 aa5.25□□□□□ -1.57
SMAD5-211ENST00000545279 CKS2P33552 79 aa5.25□□□□□ -1.57
SMAD5-211ENST00000545279 LYPD1Q8N2G4 141 aa5.25□□□□□ -1.57
SMAD5-211ENST00000545279 C10orf126Q8N4M7 172 aa5.25□□□□□ -1.57
SMAD5-211ENST00000545279 SMDT1Q9H4I9 107 aa5.25□□□□□ -1.57
SMAD5-211ENST00000545279 A6NDX4 124 aa5.25□□□□□ -1.57
SMAD5-211ENST00000545279 FAM74A7A6NL05 159 aa5.25□□□□□ -1.57
SMAD5-211ENST00000545279 G3V318 75 aa5.25□□□□□ -1.57
SMAD5-211ENST00000545279 FCN1O00602 326 aa5.25□□□□□ -1.57
SMAD5-211ENST00000545279 PSG3Q16557 428 aa5.25□□□□□ -1.57
SMAD5-211ENST00000545279 VWC2Q2TAL6 325 aa5.25□□□□□ -1.57
SMAD5-211ENST00000545279 OR4D5Q8NGN0 318 aa5.25□□□□□ -1.57
SMAD5-211ENST00000545279 SMPXQ9UHP9 88 aa5.25□□□□□ -1.57
SMAD5-211ENST00000545279 TRIP12Q14669 1992 aaPredicted RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms