RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 DUSP21Q9H596 190 aa6.56□□□□□ -1.36
CHD4-212ENST00000545083 TRAV18A0A075B6X5 111 aa6.55□□□□□ -1.36
CHD4-212ENST00000545083 RPS10-NUDT3A0A1W2PQS6 291 aa6.55□□□□□ -1.36
CHD4-212ENST00000545083 CLN5O75503 358 aa6.55□□□□□ -1.36
CHD4-212ENST00000545083 NUDT3O95989 172 aa6.55□□□□□ -1.36
CHD4-212ENST00000545083 BTF3P20290 206 aaKnown RBP6.55□□□□□ -1.36
CHD4-212ENST00000545083 MYL9P24844 172 aa6.55□□□□□ -1.36
CHD4-212ENST00000545083 HERV-K104P61576 105 aa6.55□□□□□ -1.36
CHD4-212ENST00000545083 HSPE1P61604 102 aaKnown RBP6.55□□□□□ -1.36
CHD4-212ENST00000545083 SNRPD3P62318 126 aaKnown RBP6.55□□□□□ -1.36
CHD4-212ENST00000545083 DLK1P80370 383 aa6.55□□□□□ -1.36
CHD4-212ENST00000545083 ERHP84090 104 aaKnown RBP6.55□□□□□ -1.36
CHD4-212ENST00000545083 IZUMO4Q1ZYL8 232 aa6.55□□□□□ -1.36
CHD4-212ENST00000545083 TIGITQ495A1 244 aa6.55□□□□□ -1.36
CHD4-212ENST00000545083 C22orf42Q6IC83 251 aa6.55□□□□□ -1.36
CHD4-212ENST00000545083 GSG1LQ6UXU4 331 aa6.55□□□□□ -1.36
CHD4-212ENST00000545083 GPR141Q7Z602 305 aa6.55□□□□□ -1.36
CHD4-212ENST00000545083 OR5AP2Q8NGF4 316 aa6.55□□□□□ -1.36
CHD4-212ENST00000545083 OR4A16Q8NH70 328 aa6.55□□□□□ -1.36
CHD4-212ENST00000545083 TMEM230Q96A57 120 aa6.55□□□□□ -1.36
CHD4-212ENST00000545083 SLC35B3Q9H1N7 401 aa6.55□□□□□ -1.36
CHD4-212ENST00000545083 NRN1Q9NPD7 142 aa6.55□□□□□ -1.36
CHD4-212ENST00000545083 RHBDL2Q9NX52 303 aa6.55□□□□□ -1.36
CHD4-212ENST00000545083 SCN3BQ9NY72 215 aa6.55□□□□□ -1.36
CHD4-212ENST00000545083 MDFICQ9P1T7 246 aa6.55□□□□□ -1.36
CHD4-212ENST00000545083 TRDV1A0A1B0GX56 115 aa6.54□□□□□ -1.36
CHD4-212ENST00000545083 MEIS3P1A6NDR6 274 aa6.54□□□□□ -1.36
CHD4-212ENST00000545083 J3KRW8 73 aa6.54□□□□□ -1.36
CHD4-212ENST00000545083 SCGNO76038 276 aa6.54□□□□□ -1.36
CHD4-212ENST00000545083 HBE1P02100 147 aa6.54□□□□□ -1.36
CHD4-212ENST00000545083 RNASE2P10153 161 aaKnown RBP6.54□□□□□ -1.36
CHD4-212ENST00000545083 NKX2-1P43699 371 aaPredicted RBP6.54□□□□□ -1.36
CHD4-212ENST00000545083 EIF2B2P49770 351 aaKnown RBP6.54□□□□□ -1.36
CHD4-212ENST00000545083 FRZBQ92765 325 aa6.54□□□□□ -1.36
CHD4-212ENST00000545083 SLC25A38Q96DW6 304 aa6.54□□□□□ -1.36
CHD4-212ENST00000545083 NARS2Q96I59 477 aaKnown RBP6.54□□□□□ -1.36
CHD4-212ENST00000545083 FAM210AQ96ND0 272 aa6.54□□□□□ -1.36
CHD4-212ENST00000545083 ZNF2Q9BSG1 426 aaPredicted RBP6.54□□□□□ -1.36
CHD4-212ENST00000545083 FXYD6Q9H0Q3 95 aa6.54□□□□□ -1.36
CHD4-212ENST00000545083 Q9H8V8 135 aa6.54□□□□□ -1.36
CHD4-212ENST00000545083 SEPSECSQ9HD40 501 aaKnown RBP6.54□□□□□ -1.36
CHD4-212ENST00000545083 NOTOA8MTQ0 251 aa6.53□□□□□ -1.36
CHD4-212ENST00000545083 RGS10O43665 173 aa6.53□□□□□ -1.36
CHD4-212ENST00000545083 PRM2P04554 102 aa6.53□□□□□ -1.36
CHD4-212ENST00000545083 HNRNPCP07910 306 aaKnown RBP eCLIP6.53□□□□□ -1.36
CHD4-212ENST00000545083 RFX2P48378 723 aa6.53□□□□□ -1.36
CHD4-212ENST00000545083 AP2S1P53680 142 aaPredicted RBP6.53□□□□□ -1.36
CHD4-212ENST00000545083 CCL18P55774 89 aa6.53□□□□□ -1.36
CHD4-212ENST00000545083 USF2Q15853 346 aaPredicted RBP6.53□□□□□ -1.36
CHD4-212ENST00000545083 RRN3P1Q2M238 152 aa6.53□□□□□ -1.36
CHD4-212ENST00000545083 DHRS11Q6UWP2 260 aa6.53□□□□□ -1.36
CHD4-212ENST00000545083 SSX7Q7RTT5 188 aa6.53□□□□□ -1.36
CHD4-212ENST00000545083 H2BFWTQ7Z2G1 175 aa6.53□□□□□ -1.36
CHD4-212ENST00000545083 OR5H6Q8NGV6 325 aa6.53□□□□□ -1.36
CHD4-212ENST00000545083 OR4X1Q8NH49 305 aa6.53□□□□□ -1.36
CHD4-212ENST00000545083 RNF141Q8WVD5 230 aa6.53□□□□□ -1.36
CHD4-212ENST00000545083 BORCS5Q969J3 196 aa6.53□□□□□ -1.36
CHD4-212ENST00000545083 MRGPRFQ96AM1 343 aa6.53□□□□□ -1.36
CHD4-212ENST00000545083 SAV1Q9H4B6 383 aaPredicted RBP6.53□□□□□ -1.36
CHD4-212ENST00000545083 AUNIPQ9H7T9 357 aa6.53□□□□□ -1.36
CHD4-212ENST00000545083 NDUFB11Q9NX14 153 aa6.53□□□□□ -1.36
CHD4-212ENST00000545083 EHFQ9NZC4 300 aa6.53□□□□□ -1.36
CHD4-212ENST00000545083 DAPK2Q9UIK4 370 aa6.53□□□□□ -1.36
CHD4-212ENST00000545083 BLOC1S6Q9UL45 172 aa6.53□□□□□ -1.36
CHD4-212ENST00000545083 GOLT1BQ9Y3E0 138 aa6.53□□□□□ -1.36
CHD4-212ENST00000545083 F5H768 121 aa6.52□□□□□ -1.37
CHD4-212ENST00000545083 GPR31O00270 319 aa6.52□□□□□ -1.37
CHD4-212ENST00000545083 PFDN1O60925 122 aa6.52□□□□□ -1.37
CHD4-212ENST00000545083 SMR3BP02814 79 aaPredicted RBP6.52□□□□□ -1.37
CHD4-212ENST00000545083 DEFB130BP0DP73 79 aa6.52□□□□□ -1.37
CHD4-212ENST00000545083 DEFB130AP0DP74 79 aa6.52□□□□□ -1.37
CHD4-212ENST00000545083 SNCAP37840 140 aa6.52□□□□□ -1.37
CHD4-212ENST00000545083 OPRK1P41145 380 aa6.52□□□□□ -1.37
CHD4-212ENST00000545083 PHLDA2Q53GA4 152 aa6.52□□□□□ -1.37
CHD4-212ENST00000545083 MZT2BQ6NZ67 158 aa6.52□□□□□ -1.37
CHD4-212ENST00000545083 SIGLEC15Q6ZMC9 328 aa6.52□□□□□ -1.37
CHD4-212ENST00000545083 LINC00299Q6ZSB3 139 aa6.52□□□□□ -1.37
CHD4-212ENST00000545083 CMTM1Q8IZ96 169 aa6.52□□□□□ -1.37
CHD4-212ENST00000545083 OR4B1Q8NGF8 309 aa6.52□□□□□ -1.37
CHD4-212ENST00000545083 C7orf50Q9BRJ6 194 aaKnown RBP6.52□□□□□ -1.37
CHD4-212ENST00000545083 WDR12Q9GZL7 423 aaKnown RBP6.52□□□□□ -1.37
CHD4-212ENST00000545083 Q9H3A6 140 aa6.52□□□□□ -1.37
CHD4-212ENST00000545083 TPRKBQ9Y3C4 175 aa6.52□□□□□ -1.37
CHD4-212ENST00000545083 A0A0B4J293 547 aa6.51□□□□□ -1.37
CHD4-212ENST00000545083 F6UB75 175 aa6.51□□□□□ -1.37
CHD4-212ENST00000545083 INS-IGF2F8WCM5 200 aa6.51□□□□□ -1.37
CHD4-212ENST00000545083 BUB3O43684 328 aa6.51□□□□□ -1.37
CHD4-212ENST00000545083 PMP2P02689 132 aa6.51□□□□□ -1.37
CHD4-212ENST00000545083 IGLC1P0CG04 106 aa6.51□□□□□ -1.37
CHD4-212ENST00000545083 HOXA1P49639 335 aaPredicted RBP6.51□□□□□ -1.37
CHD4-212ENST00000545083 TMBIM6P55061 237 aa6.51□□□□□ -1.37
CHD4-212ENST00000545083 KRTAP10-1P60331 282 aa6.51□□□□□ -1.37
CHD4-212ENST00000545083 PSG9Q00887 426 aa6.51□□□□□ -1.37
CHD4-212ENST00000545083 DHODHQ02127 395 aa6.51□□□□□ -1.37
CHD4-212ENST00000545083 FCN2Q15485 313 aa6.51□□□□□ -1.37
CHD4-212ENST00000545083 ZNF79Q15937 498 aa6.51□□□□□ -1.37
CHD4-212ENST00000545083 TTC32Q5I0X7 151 aa6.51□□□□□ -1.37
CHD4-212ENST00000545083 SFXN4Q6P4A7 337 aa6.51□□□□□ -1.37
CHD4-212ENST00000545083 FOXI2Q6ZQN5 318 aa6.51□□□□□ -1.37
CHD4-212ENST00000545083 Q6ZRN7 208 aaPredicted RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms