RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 S4R3C0 116 aa23.78■■□□□ 1.4
CCM2-219ENST00000544363 IGLC1P0CG04 106 aa23.77■■□□□ 1.4
CCM2-219ENST00000544363 NPBWR1P48145 328 aa23.77■■□□□ 1.4
CCM2-219ENST00000544363 NECAP1Q8NC96 275 aa23.77■■□□□ 1.4
CCM2-219ENST00000544363 GSX1Q9H4S2 264 aaPredicted RBP23.77■■□□□ 1.4
CCM2-219ENST00000544363 C21orf62Q9NYP8 219 aa23.77■■□□□ 1.4
CCM2-219ENST00000544363 ATP6V1G1O75348 118 aa23.77■■□□□ 1.4
CCM2-219ENST00000544363 BRI3O95415 125 aa23.77■■□□□ 1.4
CCM2-219ENST00000544363 SRD5A1P18405 259 aa23.77■■□□□ 1.4
CCM2-219ENST00000544363 SFT2D1Q8WV19 159 aa23.77■■□□□ 1.4
CCM2-219ENST00000544363 MBD3L1Q8WWY6 194 aa23.77■■□□□ 1.4
CCM2-219ENST00000544363 MS4A10Q96PG2 267 aa23.77■■□□□ 1.4
CCM2-219ENST00000544363 ACTR3CQ9C0K3 210 aaPredicted RBP23.77■■□□□ 1.4
CCM2-219ENST00000544363 ZNF702PQ9H963 129 aa23.77■■□□□ 1.4
CCM2-219ENST00000544363 DNAJC9-AS1A6NH13 148 aa23.76■■□□□ 1.39
CCM2-219ENST00000544363 H3BUA1 57 aa23.76■■□□□ 1.39
CCM2-219ENST00000544363 C15orf32Q32M92 178 aa23.76■■□□□ 1.39
CCM2-219ENST00000544363 FAM122CQ6P4D5 195 aa23.76■■□□□ 1.39
CCM2-219ENST00000544363 SSX7Q7RTT5 188 aa23.76■■□□□ 1.39
CCM2-219ENST00000544363 MARC2Q969Z3 335 aa23.76■■□□□ 1.39
CCM2-219ENST00000544363 TMEM95Q3KNT9 176 aa23.75■■□□□ 1.39
CCM2-219ENST00000544363 SPSB3Q6PJ21 355 aa23.75■■□□□ 1.39
CCM2-219ENST00000544363 FLNBO75369 2602 aaKnown RBP23.75■■□□□ 1.39
CCM2-219ENST00000544363 CTXND1A0A1B0GTU2 59 aa23.74■■□□□ 1.39
CCM2-219ENST00000544363 NUDT19A8MXV4 375 aa23.74■■□□□ 1.39
CCM2-219ENST00000544363 SEC14L6B5MCN3 397 aa23.74■■□□□ 1.39
CCM2-219ENST00000544363 CFHR3Q02985 330 aa23.74■■□□□ 1.39
CCM2-219ENST00000544363 IL34Q6ZMJ4 242 aa23.74■■□□□ 1.39
CCM2-219ENST00000544363 TXN2Q99757 166 aa23.74■■□□□ 1.39
CCM2-219ENST00000544363 SLC25A22Q9H936 323 aa23.74■■□□□ 1.39
CCM2-219ENST00000544363 TRAV1-1A0A0B4J248 108 aa23.73■■□□□ 1.39
CCM2-219ENST00000544363 F8W735 103 aaPredicted RBP23.73■■□□□ 1.39
CCM2-219ENST00000544363 FCGR2BP31994 310 aaPredicted RBP23.73■■□□□ 1.39
CCM2-219ENST00000544363 TRAV30A0A087WSZ9 112 aa23.73■■□□□ 1.39
CCM2-219ENST00000544363 FAM223BA6NKX1 122 aa23.73■■□□□ 1.39
CCM2-219ENST00000544363 GNG7O60262 68 aa23.73■■□□□ 1.39
CCM2-219ENST00000544363 IGKV1-17P01599 117 aa23.73■■□□□ 1.39
CCM2-219ENST00000544363 HBE1P02100 147 aa23.73■■□□□ 1.39
CCM2-219ENST00000544363 CDC34P49427 236 aaPredicted RBP23.73■■□□□ 1.39
CCM2-219ENST00000544363 TIGITQ495A1 244 aa23.73■■□□□ 1.39
CCM2-219ENST00000544363 Q56UQ5 140 aa23.73■■□□□ 1.39
CCM2-219ENST00000544363 LCN15Q6UWW0 184 aa23.73■■□□□ 1.39
CCM2-219ENST00000544363 FAM223AQ8IWN6 122 aa23.73■■□□□ 1.39
CCM2-219ENST00000544363 RAB24Q969Q5 203 aa23.73■■□□□ 1.39
CCM2-219ENST00000544363 CITED4Q96RK1 184 aa23.73■■□□□ 1.39
CCM2-219ENST00000544363 ESM1Q9NQ30 184 aa23.73■■□□□ 1.39
CCM2-219ENST00000544363 A0A1B0GV50 99 aa23.72■■□□□ 1.39
CCM2-219ENST00000544363 IGHV3-23P01764 117 aa23.72■■□□□ 1.39
CCM2-219ENST00000544363 A0A1W2PPV4 95 aa23.71■■□□□ 1.39
CCM2-219ENST00000544363 MAP1LC3B2A6NCE7 125 aa23.71■■□□□ 1.39
CCM2-219ENST00000544363 CLDN34H7C241 214 aa23.71■■□□□ 1.39
CCM2-219ENST00000544363 IGLV1-40P01703 118 aa23.71■■□□□ 1.39
CCM2-219ENST00000544363 TRGV3P03979 118 aa23.71■■□□□ 1.39
CCM2-219ENST00000544363 Q8N2B8 174 aa23.71■■□□□ 1.39
CCM2-219ENST00000544363 COMMD1Q8N668 190 aa23.71■■□□□ 1.39
CCM2-219ENST00000544363 ZNF502Q8TBZ5 544 aa23.71■■□□□ 1.39
CCM2-219ENST00000544363 MAP1LC3BQ9GZQ8 125 aa23.71■■□□□ 1.39
CCM2-219ENST00000544363 HIVEP2P31629 2446 aa23.7■■□□□ 1.39
CCM2-219ENST00000544363 ATP5G2Q06055 141 aa23.7■■□□□ 1.39
CCM2-219ENST00000544363 C19orf24Q9BVV8 132 aa23.7■■□□□ 1.39
CCM2-219ENST00000544363 BAHCC1Q9P281 2608 aa23.7■■□□□ 1.38
CCM2-219ENST00000544363 RAB19A4D1S5 217 aa23.7■■□□□ 1.38
CCM2-219ENST00000544363 EIF3GO75821 320 aaKnown RBP eCLIP23.7■■□□□ 1.38
CCM2-219ENST00000544363 FABP1P07148 127 aa23.7■■□□□ 1.38
CCM2-219ENST00000544363 EIF4E3Q8N5X7 224 aaKnown RBP23.7■■□□□ 1.38
CCM2-219ENST00000544363 EEF1AKMT3Q96AZ1 226 aa23.7■■□□□ 1.38
CCM2-219ENST00000544363 PSMB11A5LHX3 300 aa23.69■■□□□ 1.38
CCM2-219ENST00000544363 RHOBP62745 196 aa23.69■■□□□ 1.38
CCM2-219ENST00000544363 CCL20P78556 96 aa23.69■■□□□ 1.38
CCM2-219ENST00000544363 Q71RC1 249 aaPredicted RBP23.69■■□□□ 1.38
CCM2-219ENST00000544363 ZNF418Q8TF45 676 aaPredicted RBP23.69■■□□□ 1.38
CCM2-219ENST00000544363 PSG1P11464 419 aa23.68■■□□□ 1.38
CCM2-219ENST00000544363 FGF8P55075 233 aaPredicted RBP23.68■■□□□ 1.38
CCM2-219ENST00000544363 TPPP2P59282 170 aa23.68■■□□□ 1.38
CCM2-219ENST00000544363 SEPSECSQ9HD40 501 aaKnown RBP23.68■■□□□ 1.38
CCM2-219ENST00000544363 DNAJC4Q9NNZ3 241 aa23.68■■□□□ 1.38
CCM2-219ENST00000544363 TRBV7-1A0A0A6YYK4 115 aa23.67■■□□□ 1.38
CCM2-219ENST00000544363 FAM181BA6NEQ2 426 aa23.67■■□□□ 1.38
CCM2-219ENST00000544363 HMGB3O15347 200 aaKnown RBP23.67■■□□□ 1.38
CCM2-219ENST00000544363 SCGB2A1O75556 95 aa23.67■■□□□ 1.38
CCM2-219ENST00000544363 PF4V1P10720 104 aa23.67■■□□□ 1.38
CCM2-219ENST00000544363 YPEL3P61236 119 aaPredicted RBP23.67■■□□□ 1.38
CCM2-219ENST00000544363 OR1L4Q8NGR5 311 aa23.67■■□□□ 1.38
CCM2-219ENST00000544363 GATAD1Q8WUU5 269 aa23.67■■□□□ 1.38
CCM2-219ENST00000544363 TMEM37Q8WXS4 190 aa23.67■■□□□ 1.38
CCM2-219ENST00000544363 GAR1Q9NY12 217 aaKnown RBP23.67■■□□□ 1.38
CCM2-219ENST00000544363 OR2T8A6NH00 312 aa23.66■■□□□ 1.38
CCM2-219ENST00000544363 IGHG4P01861 327 aa23.66■■□□□ 1.38
CCM2-219ENST00000544363 OR5G3P0C626 314 aa23.66■■□□□ 1.38
CCM2-219ENST00000544363 RD3LP0DJH9 198 aa23.66■■□□□ 1.38
CCM2-219ENST00000544363 FAM78BQ5VT40 261 aa23.66■■□□□ 1.38
CCM2-219ENST00000544363 USMG5Q96IX5 58 aa23.66■■□□□ 1.38
CCM2-219ENST00000544363 PFDN5Q99471 154 aa23.66■■□□□ 1.38
CCM2-219ENST00000544363 COX7A2P2O60397 106 aa23.66■■□□□ 1.38
CCM2-219ENST00000544363 TOMM40O96008 361 aa23.66■■□□□ 1.38
CCM2-219ENST00000544363 PLP1P60201 277 aa23.66■■□□□ 1.38
CCM2-219ENST00000544363 ZNF329Q86UD4 541 aa23.66■■□□□ 1.38
CCM2-219ENST00000544363 CCDC140Q96MF4 163 aa23.66■■□□□ 1.38
CCM2-219ENST00000544363 KLK15Q9H2R5 256 aa23.66■■□□□ 1.38
CCM2-219ENST00000544363 DOK5Q9P104 306 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms