RNA–Protein interactions for RNA: ENST00000543988.1

OTUB1-212, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 1 (best) BASIC

Gene OTUB1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-212ENST00000543988 ENKURQ8TC29 256 aa16.36■□□□□ 0.21
OTUB1-212ENST00000543988 NPIPB3Q92617 1050 aa16.36■□□□□ 0.21
OTUB1-212ENST00000543988 NEURL2Q9BR09 285 aa16.36■□□□□ 0.21
OTUB1-212ENST00000543988 GINS3Q9BRX5 216 aa16.36■□□□□ 0.21
OTUB1-212ENST00000543988 COL7A1Q02388 2944 aa16.35■□□□□ 0.21
OTUB1-212ENST00000543988 IGHV3OR16-13A0A075B7E8 117 aa16.35■□□□□ 0.21
OTUB1-212ENST00000543988 IGHV3-74A0A0B4J1X5 117 aa16.35■□□□□ 0.21
OTUB1-212ENST00000543988 TRAV25A0A0B4J276 109 aa16.35■□□□□ 0.21
OTUB1-212ENST00000543988 CCSO14618 274 aa16.35■□□□□ 0.21
OTUB1-212ENST00000543988 OR10J1P30954 320 aa16.35■□□□□ 0.21
OTUB1-212ENST00000543988 NKX2-1P43699 371 aaPredicted RBP16.35■□□□□ 0.21
OTUB1-212ENST00000543988 POLR2GP62487 172 aaKnown RBP eCLIP16.35■□□□□ 0.21
OTUB1-212ENST00000543988 ID3Q02535 119 aa16.35■□□□□ 0.21
OTUB1-212ENST00000543988 RBPMS2Q6ZRY4 209 aaKnown RBP16.35■□□□□ 0.21
OTUB1-212ENST00000543988 RHPN1-AS1Q9BWJ2 59 aa16.35■□□□□ 0.21
OTUB1-212ENST00000543988 PAIP2BQ9ULR5 123 aaKnown RBP16.35■□□□□ 0.21
OTUB1-212ENST00000543988 TRAV30A0A087WSZ9 112 aa16.34■□□□□ 0.21
OTUB1-212ENST00000543988 TRAV14DV4A0A0A6YYC5 116 aa16.34■□□□□ 0.21
OTUB1-212ENST00000543988 H3BP45 60 aa16.34■□□□□ 0.21
OTUB1-212ENST00000543988 CHEK1O14757 476 aa16.34■□□□□ 0.21
OTUB1-212ENST00000543988 ZBTB8BQ8NAP8 495 aaPredicted RBP16.34■□□□□ 0.21
OTUB1-212ENST00000543988 WFDC10AQ9H1F0 79 aa16.34■□□□□ 0.21
OTUB1-212ENST00000543988 C19orf73Q9NVV2 129 aa16.34■□□□□ 0.21
OTUB1-212ENST00000543988 A8MZ25 164 aa16.33■□□□□ 0.2
OTUB1-212ENST00000543988 SSSCA1O60232 199 aa16.33■□□□□ 0.2
OTUB1-212ENST00000543988 RAB11AP62491 216 aa16.33■□□□□ 0.2
OTUB1-212ENST00000543988 NRARPQ7Z6K4 114 aa16.33■□□□□ 0.2
OTUB1-212ENST00000543988 RNF2Q99496 336 aa16.33■□□□□ 0.2
OTUB1-212ENST00000543988 TSPAN4O14817 238 aa16.32■□□□□ 0.2
OTUB1-212ENST00000543988 SCGB1D2O95969 90 aa16.32■□□□□ 0.2
OTUB1-212ENST00000543988 APOHP02749 345 aaPredicted RBP16.32■□□□□ 0.2
OTUB1-212ENST00000543988 GPX4P36969 197 aaPredicted RBP16.32■□□□□ 0.2
OTUB1-212ENST00000543988 GAMTQ14353 236 aa16.32■□□□□ 0.2
OTUB1-212ENST00000543988 SPANXN5Q5MJ07 72 aa16.32■□□□□ 0.2
OTUB1-212ENST00000543988 SBSPONQ8IVN8 264 aa16.32■□□□□ 0.2
OTUB1-212ENST00000543988 C12orf45Q8N5I9 185 aaPredicted RBP16.32■□□□□ 0.2
OTUB1-212ENST00000543988 ST8SIA2Q92186 375 aa16.32■□□□□ 0.2
OTUB1-212ENST00000543988 SLC35E1Q96K37 410 aa16.32■□□□□ 0.2
OTUB1-212ENST00000543988 SPAG8Q99932 426 aaPredicted RBP16.32■□□□□ 0.2
OTUB1-212ENST00000543988 GSKIPQ9P0R6 139 aa16.32■□□□□ 0.2
OTUB1-212ENST00000543988 IGHV3-66A0A0C4DH42 116 aa16.31■□□□□ 0.2
OTUB1-212ENST00000543988 YPEL3P61236 119 aaPredicted RBP16.31■□□□□ 0.2
OTUB1-212ENST00000543988 RPP30P78346 268 aaKnown RBP16.31■□□□□ 0.2
OTUB1-212ENST00000543988 LAMTOR1Q6IAA8 161 aa16.31■□□□□ 0.2
OTUB1-212ENST00000543988 DEFB125Q8N687 156 aa16.31■□□□□ 0.2
OTUB1-212ENST00000543988 PRSS46E5RG02 174 aa16.3■□□□□ 0.2
OTUB1-212ENST00000543988 IL5P05113 134 aa16.3■□□□□ 0.2
OTUB1-212ENST00000543988 NHLRC4P0CG21 123 aaPredicted RBP16.3■□□□□ 0.2
OTUB1-212ENST00000543988 VSIRQ9H7M9 311 aa16.3■□□□□ 0.2
OTUB1-212ENST00000543988 TUBA4BQ9H853 241 aa16.3■□□□□ 0.2
OTUB1-212ENST00000543988 RCL1Q9Y2P8 373 aaKnown RBP16.3■□□□□ 0.2
OTUB1-212ENST00000543988 STRAPQ9Y3F4 350 aaKnown RBP16.3■□□□□ 0.2
OTUB1-212ENST00000543988 FAM25EA8MYX2 175 aa16.29■□□□□ 0.2
OTUB1-212ENST00000543988 OR11H12B2RN74 326 aa16.29■□□□□ 0.2
OTUB1-212ENST00000543988 LILRB2Q8N423 598 aa16.29■□□□□ 0.2
OTUB1-212ENST00000543988 Q8WTZ3 238 aa16.29■□□□□ 0.2
OTUB1-212ENST00000543988 METTL26Q96S19 204 aa16.29■□□□□ 0.2
OTUB1-212ENST00000543988 STAB2Q8WWQ8 2551 aa16.28■□□□□ 0.2
OTUB1-212ENST00000543988 IGKV1D-37A0A075B6S9 117 aa16.28■□□□□ 0.2
OTUB1-212ENST00000543988 TOMM40O96008 361 aa16.28■□□□□ 0.2
OTUB1-212ENST00000543988 MBPP02686 304 aaPredicted RBP16.28■□□□□ 0.2
OTUB1-212ENST00000543988 NPPCP23582 126 aa16.28■□□□□ 0.2
OTUB1-212ENST00000543988 CRYBB3P26998 211 aa16.28■□□□□ 0.2
OTUB1-212ENST00000543988 BMI1P35226 326 aa16.28■□□□□ 0.2
OTUB1-212ENST00000543988 PAX9P55771 341 aa16.28■□□□□ 0.2
OTUB1-212ENST00000543988 DEFA1P59665 94 aa16.28■□□□□ 0.2
OTUB1-212ENST00000543988 DEFA3P59666 94 aa16.28■□□□□ 0.2
OTUB1-212ENST00000543988 SMIM8Q96KF7 97 aa16.28■□□□□ 0.2
OTUB1-212ENST00000543988 PSENENQ9NZ42 101 aa16.28■□□□□ 0.2
OTUB1-212ENST00000543988 HUWE1Q7Z6Z7 4374 aaKnown RBP16.27■□□□□ 0.2
OTUB1-212ENST00000543988 C5orf51A6NDU8 294 aa16.27■□□□□ 0.2
OTUB1-212ENST00000543988 ZFP92A6NM28 416 aa16.27■□□□□ 0.2
OTUB1-212ENST00000543988 RD3LP0DJH9 198 aa16.27■□□□□ 0.2
OTUB1-212ENST00000543988 FAM90A2PQ658T7 463 aa16.27■□□□□ 0.2
OTUB1-212ENST00000543988 TCF24Q7RTU0 167 aa16.27■□□□□ 0.2
OTUB1-212ENST00000543988 RAB40CQ96S21 281 aa16.27■□□□□ 0.2
OTUB1-212ENST00000543988 SRD5A3Q9H8P0 318 aa16.27■□□□□ 0.2
OTUB1-212ENST00000543988 IGKV3-7A0A075B6H7 116 aa16.26■□□□□ 0.19
OTUB1-212ENST00000543988 OR4C46A6NHA9 309 aa16.26■□□□□ 0.19
OTUB1-212ENST00000543988 IL4P05112 153 aa16.26■□□□□ 0.19
OTUB1-212ENST00000543988 PSG1P11464 419 aa16.26■□□□□ 0.19
OTUB1-212ENST00000543988 ZNF90Q03938 601 aa16.26■□□□□ 0.19
OTUB1-212ENST00000543988 USF2Q15853 346 aaPredicted RBP16.26■□□□□ 0.19
OTUB1-212ENST00000543988 ACOT7LQ6ZUV0 252 aa16.26■□□□□ 0.19
OTUB1-212ENST00000543988 GPN1Q9HCN4 374 aaPredicted RBP16.26■□□□□ 0.19
OTUB1-212ENST00000543988 IGKV1OR2-108A0A075B7D4 117 aa16.25■□□□□ 0.19
OTUB1-212ENST00000543988 INMT-MINDY4F8WBC2 141 aa16.25■□□□□ 0.19
OTUB1-212ENST00000543988 CCNKO75909 580 aa16.25■□□□□ 0.19
OTUB1-212ENST00000543988 DFFBO76075 338 aa16.25■□□□□ 0.19
OTUB1-212ENST00000543988 ODF3L2Q3SX64 289 aa16.25■□□□□ 0.19
OTUB1-212ENST00000543988 THAP8Q8NA92 274 aa16.25■□□□□ 0.19
OTUB1-212ENST00000543988 TMEM231Q9H6L2 316 aa16.25■□□□□ 0.19
OTUB1-212ENST00000543988 U3KQE9 123 aa16.25■□□□□ 0.19
OTUB1-212ENST00000543988 U3KQK5 164 aa16.25■□□□□ 0.19
OTUB1-212ENST00000543988 RBMY1BA6NDE4 496 aaKnown RBP16.24■□□□□ 0.19
OTUB1-212ENST00000543988 RBMY1EA6NEQ0 496 aaKnown RBP16.24■□□□□ 0.19
OTUB1-212ENST00000543988 RBMY1DP0C7P1 496 aaKnown RBP16.24■□□□□ 0.19
OTUB1-212ENST00000543988 P2RY1P47900 373 aa16.24■□□□□ 0.19
OTUB1-212ENST00000543988 TFPI2P48307 235 aa16.24■□□□□ 0.19
OTUB1-212ENST00000543988 HAGHQ16775 308 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms