RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 SIRPB1O00241 398 aa6.56□□□□□ -1.36
PDLIM5-221ENST00000542407 F2RL2O00254 374 aa6.56□□□□□ -1.36
PDLIM5-221ENST00000542407 IGHG4P01861 327 aa6.56□□□□□ -1.36
PDLIM5-221ENST00000542407 C3orf79P0CE67 100 aa6.56□□□□□ -1.36
PDLIM5-221ENST00000542407 GNB1P62873 340 aa6.56□□□□□ -1.36
PDLIM5-221ENST00000542407 SLC35B1P78383 322 aa6.56□□□□□ -1.36
PDLIM5-221ENST00000542407 Q6ZS49 121 aa6.56□□□□□ -1.36
PDLIM5-221ENST00000542407 KLF14Q8TD94 323 aaPredicted RBP6.56□□□□□ -1.36
PDLIM5-221ENST00000542407 BORCS7Q96B45 105 aa6.56□□□□□ -1.36
PDLIM5-221ENST00000542407 ZC2HC1AQ96GY0 325 aa6.56□□□□□ -1.36
PDLIM5-221ENST00000542407 SIGLEC9Q9Y336 463 aa6.56□□□□□ -1.36
PDLIM5-221ENST00000542407 ATMQ13315 3056 aa6.56□□□□□ -1.36
PDLIM5-221ENST00000542407 PSMB11A5LHX3 300 aa6.55□□□□□ -1.36
PDLIM5-221ENST00000542407 J3QT63 122 aa6.55□□□□□ -1.36
PDLIM5-221ENST00000542407 TMPRSS2O15393 492 aa6.55□□□□□ -1.36
PDLIM5-221ENST00000542407 MLNRO43193 412 aa6.55□□□□□ -1.36
PDLIM5-221ENST00000542407 CD5LO43866 347 aa6.55□□□□□ -1.36
PDLIM5-221ENST00000542407 SPINK8P0C7L1 97 aa6.55□□□□□ -1.36
PDLIM5-221ENST00000542407 YPEL3P61236 119 aaPredicted RBP6.55□□□□□ -1.36
PDLIM5-221ENST00000542407 STUMQ69YW2 141 aa6.55□□□□□ -1.36
PDLIM5-221ENST00000542407 LINC00596Q86U02 117 aa6.55□□□□□ -1.36
PDLIM5-221ENST00000542407 OR10G8Q8NGN5 311 aa6.55□□□□□ -1.36
PDLIM5-221ENST00000542407 NAT8BQ9UHF3 227 aa6.55□□□□□ -1.36
PDLIM5-221ENST00000542407 WASHC3Q9Y3C0 194 aa6.55□□□□□ -1.36
PDLIM5-221ENST00000542407 PRRC2CQ9Y520 2896 aaKnown RBP6.55□□□□□ -1.36
PDLIM5-221ENST00000542407 CENPVL3A0A0U1RRI6 287 aa6.55□□□□□ -1.36
PDLIM5-221ENST00000542407 LRP5LA4QPB2 252 aa6.55□□□□□ -1.36
PDLIM5-221ENST00000542407 J3QLI3 93 aa6.55□□□□□ -1.36
PDLIM5-221ENST00000542407 M0R2Z0 102 aa6.55□□□□□ -1.36
PDLIM5-221ENST00000542407 TIMM8AO60220 97 aaPredicted RBP6.55□□□□□ -1.36
PDLIM5-221ENST00000542407 OR2J3O76001 311 aa6.55□□□□□ -1.36
PDLIM5-221ENST00000542407 Q56UQ5 140 aa6.55□□□□□ -1.36
PDLIM5-221ENST00000542407 DNAJC30Q96LL9 226 aa6.55□□□□□ -1.36
PDLIM5-221ENST00000542407 RTL8AQ9BWD3 113 aa6.55□□□□□ -1.36
PDLIM5-221ENST00000542407 SFXN3Q9BWM7 321 aa6.55□□□□□ -1.36
PDLIM5-221ENST00000542407 ANKRD11Q6UB99 2663 aaPredicted RBP6.55□□□□□ -1.36
PDLIM5-221ENST00000542407 TRAV24A0A0B4J272 114 aa6.54□□□□□ -1.36
PDLIM5-221ENST00000542407 M0R1X1 148 aa6.54□□□□□ -1.36
PDLIM5-221ENST00000542407 PGLYRP1O75594 196 aaPredicted RBP6.54□□□□□ -1.36
PDLIM5-221ENST00000542407 GTF3C1Q12789 2109 aa6.54□□□□□ -1.36
PDLIM5-221ENST00000542407 MSMPQ1L6U9 139 aa6.54□□□□□ -1.36
PDLIM5-221ENST00000542407 Q6P435 159 aa6.54□□□□□ -1.36
PDLIM5-221ENST00000542407 Q6ZR03 302 aa6.54□□□□□ -1.36
PDLIM5-221ENST00000542407 C8orf86Q6ZUL3 223 aa6.54□□□□□ -1.36
PDLIM5-221ENST00000542407 SCCPDHQ8NBX0 429 aa6.54□□□□□ -1.36
PDLIM5-221ENST00000542407 A0A1W2PS18 150 aa6.54□□□□□ -1.36
PDLIM5-221ENST00000542407 K7EP34 96 aa6.54□□□□□ -1.36
PDLIM5-221ENST00000542407 TCTAP57738 103 aa6.54□□□□□ -1.36
PDLIM5-221ENST00000542407 PSG5Q15238 335 aa6.54□□□□□ -1.36
PDLIM5-221ENST00000542407 MPV17L2Q567V2 206 aa6.54□□□□□ -1.36
PDLIM5-221ENST00000542407 C11orf53Q8IXP5 236 aa6.54□□□□□ -1.36
PDLIM5-221ENST00000542407 FLYWCH2Q96CP2 140 aaKnown RBP6.54□□□□□ -1.36
PDLIM5-221ENST00000542407 SPANXA1Q9NS26 97 aa6.54□□□□□ -1.36
PDLIM5-221ENST00000542407 CYSLTR1Q9Y271 337 aa6.54□□□□□ -1.36
PDLIM5-221ENST00000542407 ZNF835Q9Y2P0 537 aa6.54□□□□□ -1.36
PDLIM5-221ENST00000542407 TRBV6-6A0A0A6YYG2 114 aa6.54□□□□□ -1.36
PDLIM5-221ENST00000542407 IGFBP2P18065 325 aa6.54□□□□□ -1.36
PDLIM5-221ENST00000542407 MEF2CQ06413 473 aaPredicted RBP6.54□□□□□ -1.36
PDLIM5-221ENST00000542407 C20orf204Q6ZNR8 217 aa6.54□□□□□ -1.36
PDLIM5-221ENST00000542407 C22orf34Q6ZV56 151 aa6.54□□□□□ -1.36
PDLIM5-221ENST00000542407 HES4Q9HCC6 221 aa6.54□□□□□ -1.36
PDLIM5-221ENST00000542407 DIDO1Q9BTC0 2240 aaKnown RBP6.54□□□□□ -1.36
PDLIM5-221ENST00000542407 ORM1P02763 201 aa6.53□□□□□ -1.36
PDLIM5-221ENST00000542407 TIRAPP58753 221 aa6.53□□□□□ -1.36
PDLIM5-221ENST00000542407 TFF3Q07654 80 aa6.53□□□□□ -1.36
PDLIM5-221ENST00000542407 MOB1BQ7L9L4 216 aa6.53□□□□□ -1.36
PDLIM5-221ENST00000542407 H2BFWTQ7Z2G1 175 aa6.53□□□□□ -1.36
PDLIM5-221ENST00000542407 OR4A16Q8NH70 328 aa6.53□□□□□ -1.36
PDLIM5-221ENST00000542407 OCC1Q8TAD7 63 aa6.53□□□□□ -1.36
PDLIM5-221ENST00000542407 IL1F10Q8WWZ1 152 aa6.53□□□□□ -1.36
PDLIM5-221ENST00000542407 INTS1Q8N201 2190 aaKnown RBP6.53□□□□□ -1.36
PDLIM5-221ENST00000542407 NUDT3O95989 172 aa6.53□□□□□ -1.36
PDLIM5-221ENST00000542407 PRR30Q53SZ7 412 aaPredicted RBP6.53□□□□□ -1.36
PDLIM5-221ENST00000542407 BVES-AS1Q5T3Y7 98 aa6.53□□□□□ -1.36
PDLIM5-221ENST00000542407 OR5A1Q8NGJ0 315 aa6.53□□□□□ -1.36
PDLIM5-221ENST00000542407 KCNS1Q96KK3 526 aa6.53□□□□□ -1.36
PDLIM5-221ENST00000542407 DSPP15924 2871 aaKnown RBP6.53□□□□□ -1.36
PDLIM5-221ENST00000542407 ESPL1Q14674 2120 aa6.53□□□□□ -1.36
PDLIM5-221ENST00000542407 TRBV20OR9-2A0A075B6H5 130 aa6.52□□□□□ -1.37
PDLIM5-221ENST00000542407 IGKV1-6A0A0C4DH72 117 aa6.52□□□□□ -1.37
PDLIM5-221ENST00000542407 A0A0G2JNJ9 132 aa6.52□□□□□ -1.37
PDLIM5-221ENST00000542407 FAM231BA6NCW3 169 aa6.52□□□□□ -1.37
PDLIM5-221ENST00000542407 CCDC179H3BU77 68 aa6.52□□□□□ -1.37
PDLIM5-221ENST00000542407 ZNF324O75467 553 aaPredicted RBP6.52□□□□□ -1.37
PDLIM5-221ENST00000542407 CA2P00918 260 aa6.52□□□□□ -1.37
PDLIM5-221ENST00000542407 RPL7P18124 248 aaKnown RBP6.52□□□□□ -1.37
PDLIM5-221ENST00000542407 SRIP30626 198 aa6.52□□□□□ -1.37
PDLIM5-221ENST00000542407 Q0VG73 95 aa6.52□□□□□ -1.37
PDLIM5-221ENST00000542407 CATR1Q13166 79 aa6.52□□□□□ -1.37
PDLIM5-221ENST00000542407 ZNF146Q15072 292 aa6.52□□□□□ -1.37
PDLIM5-221ENST00000542407 CLEC7AQ9BXN2 247 aa6.52□□□□□ -1.37
PDLIM5-221ENST00000542407 Q9UFV3 132 aa6.52□□□□□ -1.37
PDLIM5-221ENST00000542407 FZR1Q9UM11 496 aa6.52□□□□□ -1.37
PDLIM5-221ENST00000542407 MUC21A0A0G2JKD1 596 aa6.52□□□□□ -1.37
PDLIM5-221ENST00000542407 MUC21A0A140T8X8 626 aa6.52□□□□□ -1.37
PDLIM5-221ENST00000542407 KBTBD11-OT1A0A1B0GTJ5 212 aa6.52□□□□□ -1.37
PDLIM5-221ENST00000542407 NHLRC4P0CG21 123 aaPredicted RBP6.52□□□□□ -1.37
PDLIM5-221ENST00000542407 IGLL1P15814 213 aa6.52□□□□□ -1.37
PDLIM5-221ENST00000542407 MUC21Q5SSG8 566 aa6.52□□□□□ -1.37
PDLIM5-221ENST00000542407 Q8IYB0 196 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms