RNA–Protein interactions for RNA: ENST00000541661.5

SCARB1-207, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 476 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-207ENST00000541661 HOXA1P49639 335 aaPredicted RBP9.35□□□□□ -0.91
SCARB1-207ENST00000541661 AKR1C2P52895 323 aa9.35□□□□□ -0.91
SCARB1-207ENST00000541661 PIGPP57054 158 aa9.35□□□□□ -0.91
SCARB1-207ENST00000541661 YPEL3P61236 119 aaPredicted RBP9.35□□□□□ -0.91
SCARB1-207ENST00000541661 SNRPD3P62318 126 aaKnown RBP9.35□□□□□ -0.91
SCARB1-207ENST00000541661 AARDQ4LEZ3 155 aa9.35□□□□□ -0.91
SCARB1-207ENST00000541661 LHFPL1Q86WI0 220 aa9.35□□□□□ -0.91
SCARB1-207ENST00000541661 OR1S2Q8NGQ3 325 aa9.35□□□□□ -0.91
SCARB1-207ENST00000541661 Q8WTZ3 238 aa9.35□□□□□ -0.91
SCARB1-207ENST00000541661 KRTAP4-5Q9BYR2 181 aa9.35□□□□□ -0.91
SCARB1-207ENST00000541661 ENY2Q9NPA8 101 aa9.35□□□□□ -0.91
SCARB1-207ENST00000541661 C3orf85A0A1B0GTC6 90 aa9.34□□□□□ -0.91
SCARB1-207ENST00000541661 SMIM31A0A1B0GVY4 71 aa9.34□□□□□ -0.91
SCARB1-207ENST00000541661 RPS10-NUDT3A0A1W2PQS6 291 aa9.34□□□□□ -0.91
SCARB1-207ENST00000541661 SMIM9A6NGZ8 99 aa9.34□□□□□ -0.91
SCARB1-207ENST00000541661 ZNF705FA8MVS1 300 aaPredicted RBP9.34□□□□□ -0.91
SCARB1-207ENST00000541661 IFNA21P01568 189 aa9.34□□□□□ -0.91
SCARB1-207ENST00000541661 APOA1P02647 267 aa9.34□□□□□ -0.91
SCARB1-207ENST00000541661 ZNF705DP0CH99 300 aaPredicted RBP9.34□□□□□ -0.91
SCARB1-207ENST00000541661 ZNF705BP0CI00 300 aaPredicted RBP9.34□□□□□ -0.91
SCARB1-207ENST00000541661 HLA-DRB4P13762 266 aa9.34□□□□□ -0.91
SCARB1-207ENST00000541661 PGAM2P15259 253 aa9.34□□□□□ -0.91
SCARB1-207ENST00000541661 HTR2BP41595 481 aa9.34□□□□□ -0.91
SCARB1-207ENST00000541661 RNF212Q495C1 297 aa9.34□□□□□ -0.91
SCARB1-207ENST00000541661 PRSS54Q6PEW0 395 aa9.34□□□□□ -0.91
SCARB1-207ENST00000541661 NRN1Q9NPD7 142 aa9.34□□□□□ -0.91
SCARB1-207ENST00000541661 HLA-DRB4X5D2U9 266 aa9.34□□□□□ -0.91
SCARB1-207ENST00000541661 A0A0G2JRQ6 117 aa9.33□□□□□ -0.92
SCARB1-207ENST00000541661 M0QYG6 137 aa9.33□□□□□ -0.92
SCARB1-207ENST00000541661 BUB3O43684 328 aa9.33□□□□□ -0.92
SCARB1-207ENST00000541661 SLC25A4P12235 298 aa9.33□□□□□ -0.92
SCARB1-207ENST00000541661 PI3P19957 117 aa9.33□□□□□ -0.92
SCARB1-207ENST00000541661 UCP1P25874 307 aa9.33□□□□□ -0.92
SCARB1-207ENST00000541661 ALDH3B2P48448 385 aa9.33□□□□□ -0.92
SCARB1-207ENST00000541661 SPCS3P61009 180 aa9.33□□□□□ -0.92
SCARB1-207ENST00000541661 DHODHQ02127 395 aa9.33□□□□□ -0.92
SCARB1-207ENST00000541661 C2orf83Q53S99 150 aa9.33□□□□□ -0.92
SCARB1-207ENST00000541661 Q6ZRM9 215 aa9.33□□□□□ -0.92
SCARB1-207ENST00000541661 SNX29P2Q8IUI4 249 aa9.33□□□□□ -0.92
SCARB1-207ENST00000541661 OR52E5Q8NH55 327 aa9.33□□□□□ -0.92
SCARB1-207ENST00000541661 RRNAD1Q96FB5 475 aaKnown RBP9.33□□□□□ -0.92
SCARB1-207ENST00000541661 A0A087WXM4 84 aa9.32□□□□□ -0.92
SCARB1-207ENST00000541661 TEX48A0A1B0GUV7 120 aa9.32□□□□□ -0.92
SCARB1-207ENST00000541661 B3GALNT1O75752 331 aa9.32□□□□□ -0.92
SCARB1-207ENST00000541661 OR10J1P30954 320 aa9.32□□□□□ -0.92
SCARB1-207ENST00000541661 NKX2-1P43699 371 aaPredicted RBP9.32□□□□□ -0.92
SCARB1-207ENST00000541661 RND2P52198 227 aa9.32□□□□□ -0.92
SCARB1-207ENST00000541661 USF2Q15853 346 aaPredicted RBP9.32□□□□□ -0.92
SCARB1-207ENST00000541661 SP6Q3SY56 376 aa9.32□□□□□ -0.92
SCARB1-207ENST00000541661 SOHLH1Q5JUK2 328 aa9.32□□□□□ -0.92
SCARB1-207ENST00000541661 SIGLEC15Q6ZMC9 328 aa9.32□□□□□ -0.92
SCARB1-207ENST00000541661 UBE2DNLQ8IWF7 75 aa9.32□□□□□ -0.92
SCARB1-207ENST00000541661 ARRDC1Q8N5I2 433 aa9.32□□□□□ -0.92
SCARB1-207ENST00000541661 RNASEH2CQ8TDP1 164 aaKnown RBP9.32□□□□□ -0.92
SCARB1-207ENST00000541661 YIPF6Q96EC8 236 aa9.32□□□□□ -0.92
SCARB1-207ENST00000541661 CLUHP3Q96NS8 147 aa9.32□□□□□ -0.92
SCARB1-207ENST00000541661 COMMD3Q9UBI1 195 aa9.32□□□□□ -0.92
SCARB1-207ENST00000541661 DKK2Q9UBU2 259 aa9.32□□□□□ -0.92
SCARB1-207ENST00000541661 RFNGQ9Y644 331 aa9.32□□□□□ -0.92
SCARB1-207ENST00000541661 NACAE9PAV3 2078 aa9.32□□□□□ -0.92
SCARB1-207ENST00000541661 IGLV2-18A0A075B6J9 118 aa9.31□□□□□ -0.92
SCARB1-207ENST00000541661 GSTZ1O43708 216 aaPredicted RBP9.31□□□□□ -0.92
SCARB1-207ENST00000541661 IL4P05112 153 aa9.31□□□□□ -0.92
SCARB1-207ENST00000541661 ELK1P19419 428 aa9.31□□□□□ -0.92
SCARB1-207ENST00000541661 LSM3P62310 102 aaKnown RBP9.31□□□□□ -0.92
SCARB1-207ENST00000541661 OXA1LQ15070 435 aa9.31□□□□□ -0.92
SCARB1-207ENST00000541661 TRIM16LQ309B1 348 aa9.31□□□□□ -0.92
SCARB1-207ENST00000541661 RNASE10Q5GAN6 216 aaKnown RBP9.31□□□□□ -0.92
SCARB1-207ENST00000541661 ZNF575Q86XF7 245 aa9.31□□□□□ -0.92
SCARB1-207ENST00000541661 FAM219AQ8IW50 185 aa9.31□□□□□ -0.92
SCARB1-207ENST00000541661 ZFAND1Q8TCF1 268 aa9.31□□□□□ -0.92
SCARB1-207ENST00000541661 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.31□□□□□ -0.92
SCARB1-207ENST00000541661 COPZ2Q9P299 210 aa9.31□□□□□ -0.92
SCARB1-207ENST00000541661 NXPH3O95157 252 aa9.3□□□□□ -0.92
SCARB1-207ENST00000541661 CDS2O95674 445 aa9.3□□□□□ -0.92
SCARB1-207ENST00000541661 TOMM40O96008 361 aa9.3□□□□□ -0.92
SCARB1-207ENST00000541661 CD3DP04234 171 aa9.3□□□□□ -0.92
SCARB1-207ENST00000541661 TBPP20226 339 aa9.3□□□□□ -0.92
SCARB1-207ENST00000541661 GDF5OSQ5U4N7 250 aa9.3□□□□□ -0.92
SCARB1-207ENST00000541661 ETFRF1Q6IPR1 90 aa9.3□□□□□ -0.92
SCARB1-207ENST00000541661 CCDC71LQ8N9Z2 235 aa9.3□□□□□ -0.92
SCARB1-207ENST00000541661 TERB2Q8NHR7 220 aa9.3□□□□□ -0.92
SCARB1-207ENST00000541661 TMEM170AQ8WVE7 144 aa9.3□□□□□ -0.92
SCARB1-207ENST00000541661 NIPSNAP3BQ9BS92 247 aa9.3□□□□□ -0.92
SCARB1-207ENST00000541661 HEYLQ9NQ87 328 aaPredicted RBP9.3□□□□□ -0.92
SCARB1-207ENST00000541661 KLK11Q9UBX7 282 aa9.3□□□□□ -0.92
SCARB1-207ENST00000541661 LRP1BQ9NZR2 4599 aa9.29□□□□□ -0.92
SCARB1-207ENST00000541661 RD3LP0DJH9 198 aa9.29□□□□□ -0.92
SCARB1-207ENST00000541661 EMP1P54849 157 aa9.29□□□□□ -0.92
SCARB1-207ENST00000541661 C1orf134Q5TEV5 83 aa9.29□□□□□ -0.92
SCARB1-207ENST00000541661 FAM222AQ5U5X8 452 aa9.29□□□□□ -0.92
SCARB1-207ENST00000541661 ZNF709Q8N972 641 aa9.29□□□□□ -0.92
SCARB1-207ENST00000541661 RNASE11Q8TAA1 199 aaKnown RBP9.29□□□□□ -0.92
SCARB1-207ENST00000541661 NPIPB3Q92617 1050 aa9.29□□□□□ -0.92
SCARB1-207ENST00000541661 TMEM222Q9H0R3 208 aa9.29□□□□□ -0.92
SCARB1-207ENST00000541661 SAV1Q9H4B6 383 aaPredicted RBP9.29□□□□□ -0.92
SCARB1-207ENST00000541661 ZNF701M0R085 212 aaPredicted RBP9.28□□□□□ -0.92
SCARB1-207ENST00000541661 HPGDSO60760 199 aa9.28□□□□□ -0.92
SCARB1-207ENST00000541661 PSG1P11464 419 aa9.28□□□□□ -0.92
SCARB1-207ENST00000541661 FOXI2Q6ZQN5 318 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms