RNA–Protein interactions for RNA: ENST00000541416.5

SNHG1-216, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 996 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-216ENST00000541416 TIGITQ495A1 244 aa8.77□□□□□ -1.01
SNHG1-216ENST00000541416 ZNF705AQ6ZN79 300 aaPredicted RBP8.77□□□□□ -1.01
SNHG1-216ENST00000541416 ZNF575Q86XF7 245 aa8.77□□□□□ -1.01
SNHG1-216ENST00000541416 GLMPQ8WWB7 406 aa8.77□□□□□ -1.01
SNHG1-216ENST00000541416 NIPSNAP3BQ9BS92 247 aa8.77□□□□□ -1.01
SNHG1-216ENST00000541416 SCPEP1Q9HB40 452 aa8.77□□□□□ -1.01
SNHG1-216ENST00000541416 TMED3Q9Y3Q3 217 aa8.77□□□□□ -1.01
SNHG1-216ENST00000541416 U3KQE9 123 aa8.77□□□□□ -1.01
SNHG1-216ENST00000541416 IGHV3OR16-12A0A075B7B8 117 aa8.76□□□□□ -1.01
SNHG1-216ENST00000541416 A0A0B4J293 547 aa8.76□□□□□ -1.01
SNHG1-216ENST00000541416 ZNF705FA8MVS1 300 aaPredicted RBP8.76□□□□□ -1.01
SNHG1-216ENST00000541416 IGKV1-17P01599 117 aa8.76□□□□□ -1.01
SNHG1-216ENST00000541416 ZNF705DP0CH99 300 aaPredicted RBP8.76□□□□□ -1.01
SNHG1-216ENST00000541416 ZNF705BP0CI00 300 aaPredicted RBP8.76□□□□□ -1.01
SNHG1-216ENST00000541416 HLA-DRB4P13762 266 aa8.76□□□□□ -1.01
SNHG1-216ENST00000541416 OR10J1P30954 320 aa8.76□□□□□ -1.01
SNHG1-216ENST00000541416 ETV6P41212 452 aa8.76□□□□□ -1.01
SNHG1-216ENST00000541416 NKX2-1P43699 371 aaPredicted RBP8.76□□□□□ -1.01
SNHG1-216ENST00000541416 YPEL3P61236 119 aaPredicted RBP8.76□□□□□ -1.01
SNHG1-216ENST00000541416 RND3P61587 244 aa8.76□□□□□ -1.01
SNHG1-216ENST00000541416 OXA1LQ15070 435 aa8.76□□□□□ -1.01
SNHG1-216ENST00000541416 TRIM16LQ309B1 348 aa8.76□□□□□ -1.01
SNHG1-216ENST00000541416 ETFRF1Q6IPR1 90 aa8.76□□□□□ -1.01
SNHG1-216ENST00000541416 SIGLEC15Q6ZMC9 328 aa8.76□□□□□ -1.01
SNHG1-216ENST00000541416 FNDC4Q9H6D8 234 aaPredicted RBP8.76□□□□□ -1.01
SNHG1-216ENST00000541416 HLA-DRB4X5D2U9 266 aa8.76□□□□□ -1.01
SNHG1-216ENST00000541416 C3orf85A0A1B0GTC6 90 aa8.75□□□□□ -1.01
SNHG1-216ENST00000541416 C16orf90A8MZG2 172 aa8.75□□□□□ -1.01
SNHG1-216ENST00000541416 B3GALNT1O75752 331 aa8.75□□□□□ -1.01
SNHG1-216ENST00000541416 CDK2AP2O75956 126 aa8.75□□□□□ -1.01
SNHG1-216ENST00000541416 IGKV1-5P01602 117 aa8.75□□□□□ -1.01
SNHG1-216ENST00000541416 IL4P05112 153 aa8.75□□□□□ -1.01
SNHG1-216ENST00000541416 HTN3P15516 51 aa8.75□□□□□ -1.01
SNHG1-216ENST00000541416 ID1P41134 155 aa8.75□□□□□ -1.01
SNHG1-216ENST00000541416 PIGPP57054 158 aa8.75□□□□□ -1.01
SNHG1-216ENST00000541416 SPCS3P61009 180 aa8.75□□□□□ -1.01
SNHG1-216ENST00000541416 IZUMO4Q1ZYL8 232 aa8.75□□□□□ -1.01
SNHG1-216ENST00000541416 NOXA1Q86UR1 476 aa8.75□□□□□ -1.01
SNHG1-216ENST00000541416 CCDC71LQ8N9Z2 235 aa8.75□□□□□ -1.01
SNHG1-216ENST00000541416 C15orf53Q8NAA6 179 aa8.75□□□□□ -1.01
SNHG1-216ENST00000541416 RNASEH2CQ8TDP1 164 aaKnown RBP8.75□□□□□ -1.01
SNHG1-216ENST00000541416 GPX8Q8TED1 209 aa8.75□□□□□ -1.01
SNHG1-216ENST00000541416 SCRT1Q9BWW7 348 aa8.75□□□□□ -1.01
SNHG1-216ENST00000541416 MRPL36Q9P0J6 103 aaKnown RBP8.75□□□□□ -1.01
SNHG1-216ENST00000541416 DKK2Q9UBU2 259 aa8.75□□□□□ -1.01
SNHG1-216ENST00000541416 GOLT1BQ9Y3E0 138 aa8.75□□□□□ -1.01
SNHG1-216ENST00000541416 HBE1P02100 147 aa8.74□□□□□ -1.01
SNHG1-216ENST00000541416 IGLC1P0CG04 106 aa8.74□□□□□ -1.01
SNHG1-216ENST00000541416 RND2P52198 227 aa8.74□□□□□ -1.01
SNHG1-216ENST00000541416 DHODHQ02127 395 aa8.74□□□□□ -1.01
SNHG1-216ENST00000541416 NEDD8Q15843 81 aa8.74□□□□□ -1.01
SNHG1-216ENST00000541416 MLANAQ16655 118 aa8.74□□□□□ -1.01
SNHG1-216ENST00000541416 BSXQ3C1V8 233 aa8.74□□□□□ -1.01
SNHG1-216ENST00000541416 FAM222AQ5U5X8 452 aa8.74□□□□□ -1.01
SNHG1-216ENST00000541416 SPATA31B1PQ5VZV4 182 aa8.74□□□□□ -1.01
SNHG1-216ENST00000541416 FAM219AQ8IW50 185 aa8.74□□□□□ -1.01
SNHG1-216ENST00000541416 ATG101Q9BSB4 218 aa8.74□□□□□ -1.01
SNHG1-216ENST00000541416 HEYLQ9NQ87 328 aaPredicted RBP8.74□□□□□ -1.01
SNHG1-216ENST00000541416 COPZ2Q9P299 210 aa8.74□□□□□ -1.01
SNHG1-216ENST00000541416 CACFD1Q9UGQ2 172 aa8.74□□□□□ -1.01
SNHG1-216ENST00000541416 BUB3O43684 328 aa8.73□□□□□ -1.01
SNHG1-216ENST00000541416 APOA1P02647 267 aa8.73□□□□□ -1.01
SNHG1-216ENST00000541416 P0C879 139 aa8.73□□□□□ -1.01
SNHG1-216ENST00000541416 RD3LP0DJH9 198 aa8.73□□□□□ -1.01
SNHG1-216ENST00000541416 RNASE10Q5GAN6 216 aaKnown RBP8.73□□□□□ -1.01
SNHG1-216ENST00000541416 PRSS54Q6PEW0 395 aa8.73□□□□□ -1.01
SNHG1-216ENST00000541416 GSG1LQ6UXU4 331 aa8.73□□□□□ -1.01
SNHG1-216ENST00000541416 FOXI2Q6ZQN5 318 aa8.73□□□□□ -1.01
SNHG1-216ENST00000541416 MAPKAPK5-AS1Q8N8E1 139 aa8.73□□□□□ -1.01
SNHG1-216ENST00000541416 OR52E5Q8NH55 327 aa8.73□□□□□ -1.01
SNHG1-216ENST00000541416 COQ8AQ8NI60 647 aa8.73□□□□□ -1.01
SNHG1-216ENST00000541416 ZFAND1Q8TCF1 268 aa8.73□□□□□ -1.01
SNHG1-216ENST00000541416 CLUHP3Q96NS8 147 aa8.73□□□□□ -1.01
SNHG1-216ENST00000541416 TP53RKQ96S44 253 aa8.73□□□□□ -1.01
SNHG1-216ENST00000541416 C7orf50Q9BRJ6 194 aaKnown RBP8.73□□□□□ -1.01
SNHG1-216ENST00000541416 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.73□□□□□ -1.01
SNHG1-216ENST00000541416 TOMM40O96008 361 aa8.72□□□□□ -1.01
SNHG1-216ENST00000541416 IGKV3-20P01619 116 aa8.72□□□□□ -1.01
SNHG1-216ENST00000541416 PI3P19957 117 aa8.72□□□□□ -1.01
SNHG1-216ENST00000541416 DAD1P61803 113 aa8.72□□□□□ -1.01
SNHG1-216ENST00000541416 USF2Q15853 346 aaPredicted RBP8.72□□□□□ -1.01
SNHG1-216ENST00000541416 C2orf83Q53S99 150 aa8.72□□□□□ -1.01
SNHG1-216ENST00000541416 SAMD13Q5VXD3 122 aa8.72□□□□□ -1.01
SNHG1-216ENST00000541416 SNX29P2Q8IUI4 249 aa8.72□□□□□ -1.01
SNHG1-216ENST00000541416 ARRDC1Q8N5I2 433 aa8.72□□□□□ -1.01
SNHG1-216ENST00000541416 SLC24A4Q8NFF2 622 aa8.72□□□□□ -1.01
SNHG1-216ENST00000541416 LINC00052Q96N35 136 aa8.72□□□□□ -1.01
SNHG1-216ENST00000541416 KRTAP4-5Q9BYR2 181 aa8.72□□□□□ -1.01
SNHG1-216ENST00000541416 SAV1Q9H4B6 383 aaPredicted RBP8.72□□□□□ -1.01
SNHG1-216ENST00000541416 LOC102723971A0A1B0GUV8 181 aa8.71□□□□□ -1.02
SNHG1-216ENST00000541416 CEBPZOSA8MTT3 80 aa8.71□□□□□ -1.02
SNHG1-216ENST00000541416 M0QYG6 137 aa8.71□□□□□ -1.02
SNHG1-216ENST00000541416 TBPP20226 339 aa8.71□□□□□ -1.02
SNHG1-216ENST00000541416 RPS19P39019 145 aaKnown RBP8.71□□□□□ -1.02
SNHG1-216ENST00000541416 ALDH3B2P48448 385 aa8.71□□□□□ -1.02
SNHG1-216ENST00000541416 PSMB3P49720 205 aa8.71□□□□□ -1.02
SNHG1-216ENST00000541416 RRN3P1Q2M238 152 aa8.71□□□□□ -1.02
SNHG1-216ENST00000541416 EBLN2Q6P2I7 272 aa8.71□□□□□ -1.02
SNHG1-216ENST00000541416 TMEM88Q6PEY1 159 aa8.71□□□□□ -1.02
SNHG1-216ENST00000541416 OR4B1Q8NGF8 309 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 158.9 ms