RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 A0A0B4J293 547 aa19.21■□□□□ 0.67
CHFR-218ENST00000540963 CTDSP2O14595 271 aa19.21■□□□□ 0.67
CHFR-218ENST00000540963 IFNA10P01566 189 aa19.21■□□□□ 0.67
CHFR-218ENST00000540963 IFNA21P01568 189 aa19.21■□□□□ 0.67
CHFR-218ENST00000540963 IFNA17P01571 189 aa19.21■□□□□ 0.67
CHFR-218ENST00000540963 RNASE2P10153 161 aaKnown RBP19.21■□□□□ 0.67
CHFR-218ENST00000540963 DHRS2Q13268 280 aa19.21■□□□□ 0.67
CHFR-218ENST00000540963 SOHLH1Q5JUK2 328 aa19.21■□□□□ 0.67
CHFR-218ENST00000540963 Q6ZR54 194 aa19.21■□□□□ 0.67
CHFR-218ENST00000540963 NEU1Q99519 415 aa19.21■□□□□ 0.67
CHFR-218ENST00000540963 PPP5CP53041 499 aa19.2■□□□□ 0.66
CHFR-218ENST00000540963 SPINK9Q5DT21 86 aa19.2■□□□□ 0.66
CHFR-218ENST00000540963 FNDC4Q9H6D8 234 aaPredicted RBP19.2■□□□□ 0.66
CHFR-218ENST00000540963 TMEM189A5PLL7 270 aa19.19■□□□□ 0.66
CHFR-218ENST00000540963 OPRK1P41145 380 aa19.19■□□□□ 0.66
CHFR-218ENST00000540963 RNASE10Q5GAN6 216 aaKnown RBP19.19■□□□□ 0.66
CHFR-218ENST00000540963 PSMG4Q5JS54 123 aa19.19■□□□□ 0.66
CHFR-218ENST00000540963 ARRDC1Q8N5I2 433 aa19.19■□□□□ 0.66
CHFR-218ENST00000540963 AP3S1Q92572 193 aa19.19■□□□□ 0.66
CHFR-218ENST00000540963 PDCD10Q9BUL8 212 aa19.19■□□□□ 0.66
CHFR-218ENST00000540963 MRPL36Q9P0J6 103 aaKnown RBP19.19■□□□□ 0.66
CHFR-218ENST00000540963 A0A0G2JRQ6 117 aa19.18■□□□□ 0.66
CHFR-218ENST00000540963 ATG12O94817 140 aa19.18■□□□□ 0.66
CHFR-218ENST00000540963 IGKV1-17P01599 117 aa19.18■□□□□ 0.66
CHFR-218ENST00000540963 SPART-AS1P0CW21 52 aa19.18■□□□□ 0.66
CHFR-218ENST00000540963 PIGPP57054 158 aa19.18■□□□□ 0.66
CHFR-218ENST00000540963 SNRPD3P62318 126 aaKnown RBP19.18■□□□□ 0.66
CHFR-218ENST00000540963 C16orf54Q6UWD8 224 aa19.18■□□□□ 0.66
CHFR-218ENST00000540963 GLMPQ8WWB7 406 aa19.18■□□□□ 0.66
CHFR-218ENST00000540963 SCRT1Q9BWW7 348 aa19.18■□□□□ 0.66
CHFR-218ENST00000540963 SMIM9A6NGZ8 99 aa19.17■□□□□ 0.66
CHFR-218ENST00000540963 PGAM2P15259 253 aa19.17■□□□□ 0.66
CHFR-218ENST00000540963 SP6Q3SY56 376 aa19.17■□□□□ 0.66
CHFR-218ENST00000540963 ZNF705AQ6ZN79 300 aaPredicted RBP19.17■□□□□ 0.66
CHFR-218ENST00000540963 TMEM229BQ8NBD8 167 aa19.17■□□□□ 0.66
CHFR-218ENST00000540963 ZNF486Q96H40 463 aaPredicted RBP19.17■□□□□ 0.66
CHFR-218ENST00000540963 MRPS26Q9BYN8 205 aaKnown RBP19.17■□□□□ 0.66
CHFR-218ENST00000540963 XCL2Q9UBD3 114 aa19.17■□□□□ 0.66
CHFR-218ENST00000540963 TEX48A0A1B0GUV7 120 aa19.16■□□□□ 0.66
CHFR-218ENST00000540963 H3BMM0 161 aa19.16■□□□□ 0.66
CHFR-218ENST00000540963 BSXQ3C1V8 233 aa19.16■□□□□ 0.66
CHFR-218ENST00000540963 RNF212Q495C1 297 aa19.16■□□□□ 0.66
CHFR-218ENST00000540963 Q6ZRM9 215 aa19.16■□□□□ 0.66
CHFR-218ENST00000540963 UBE2DNLQ8IWF7 75 aa19.16■□□□□ 0.66
CHFR-218ENST00000540963 TERB2Q8NHR7 220 aa19.16■□□□□ 0.66
CHFR-218ENST00000540963 KRTAP4-5Q9BYR2 181 aa19.16■□□□□ 0.66
CHFR-218ENST00000540963 HNRNPCP07910 306 aaKnown RBP eCLIP19.15■□□□□ 0.66
CHFR-218ENST00000540963 TBPP20226 339 aa19.15■□□□□ 0.66
CHFR-218ENST00000540963 HOXA1P49639 335 aaPredicted RBP19.15■□□□□ 0.66
CHFR-218ENST00000540963 AKR1C2P52895 323 aa19.15■□□□□ 0.66
CHFR-218ENST00000540963 FAAP20Q6NZ36 180 aa19.15■□□□□ 0.66
CHFR-218ENST00000540963 OR13C8Q8NGS7 320 aa19.15■□□□□ 0.66
CHFR-218ENST00000540963 ENY2Q9NPA8 101 aa19.15■□□□□ 0.66
CHFR-218ENST00000540963 C3orf85A0A1B0GTC6 90 aa19.14■□□□□ 0.65
CHFR-218ENST00000540963 RPS10-NUDT3A0A1W2PQS6 291 aa19.14■□□□□ 0.65
CHFR-218ENST00000540963 ZNF705FA8MVS1 300 aaPredicted RBP19.14■□□□□ 0.65
CHFR-218ENST00000540963 FAM90A26D6RGX4 464 aa19.14■□□□□ 0.65
CHFR-218ENST00000540963 ZNF705DP0CH99 300 aaPredicted RBP19.14■□□□□ 0.65
CHFR-218ENST00000540963 ZNF705BP0CI00 300 aaPredicted RBP19.14■□□□□ 0.65
CHFR-218ENST00000540963 MLANAQ16655 118 aa19.14■□□□□ 0.65
CHFR-218ENST00000540963 TIGITQ495A1 244 aa19.14■□□□□ 0.65
CHFR-218ENST00000540963 MARCH1Q8TCQ1 289 aa19.14■□□□□ 0.65
CHFR-218ENST00000540963 Q8WTZ3 238 aa19.14■□□□□ 0.65
CHFR-218ENST00000540963 GABARAPH6UMI1 98 aa19.13■□□□□ 0.65
CHFR-218ENST00000540963 RAB3DO95716 219 aa19.13■□□□□ 0.65
CHFR-218ENST00000540963 ETV6P41212 452 aa19.13■□□□□ 0.65
CHFR-218ENST00000540963 YPEL3P61236 119 aaPredicted RBP19.13■□□□□ 0.65
CHFR-218ENST00000540963 STEAP1BQ6NZ63 245 aa19.13■□□□□ 0.65
CHFR-218ENST00000540963 GPR141Q7Z602 305 aa19.13■□□□□ 0.65
CHFR-218ENST00000540963 OR1S2Q8NGQ3 325 aa19.13■□□□□ 0.65
CHFR-218ENST00000540963 RTBDNQ9BSG5 229 aaPredicted RBP19.13■□□□□ 0.65
CHFR-218ENST00000540963 NRN1Q9NPD7 142 aa19.13■□□□□ 0.65
CHFR-218ENST00000540963 HLA-DRB4P13762 266 aa19.12■□□□□ 0.65
CHFR-218ENST00000540963 UCP1P25874 307 aa19.12■□□□□ 0.65
CHFR-218ENST00000540963 ZNF575Q86XF7 245 aa19.12■□□□□ 0.65
CHFR-218ENST00000540963 DYNC2LI1Q8TCX1 351 aa19.12■□□□□ 0.65
CHFR-218ENST00000540963 HLA-DRB4X5D2U9 266 aa19.12■□□□□ 0.65
CHFR-218ENST00000540963 IGLV2-18A0A075B6J9 118 aa19.11■□□□□ 0.65
CHFR-218ENST00000540963 IGLC1P0CG04 106 aa19.11■□□□□ 0.65
CHFR-218ENST00000540963 TAS2R19P59542 299 aa19.11■□□□□ 0.65
CHFR-218ENST00000540963 LHFPL5Q8TAF8 219 aa19.11■□□□□ 0.65
CHFR-218ENST00000540963 SLC25A4P12235 298 aa19.1■□□□□ 0.65
CHFR-218ENST00000540963 HTR2BP41595 481 aa19.1■□□□□ 0.65
CHFR-218ENST00000540963 NKX2-1P43699 371 aaPredicted RBP19.1■□□□□ 0.65
CHFR-218ENST00000540963 OXA1LQ15070 435 aa19.1■□□□□ 0.65
CHFR-218ENST00000540963 SCGB2B2Q4G0G5 96 aa19.1■□□□□ 0.65
CHFR-218ENST00000540963 C1orf134Q5TEV5 83 aa19.1■□□□□ 0.65
CHFR-218ENST00000540963 CLVS1Q8IUQ0 354 aaPredicted RBP19.1■□□□□ 0.65
CHFR-218ENST00000540963 RFNGQ9Y644 331 aa19.1■□□□□ 0.65
CHFR-218ENST00000540963 NACAE9PAV3 2078 aa19.1■□□□□ 0.65
CHFR-218ENST00000540963 GSTZ1O43708 216 aaPredicted RBP19.09■□□□□ 0.65
CHFR-218ENST00000540963 AARDQ4LEZ3 155 aa19.09■□□□□ 0.65
CHFR-218ENST00000540963 ZFAND1Q8TCF1 268 aa19.09■□□□□ 0.65
CHFR-218ENST00000540963 GLYATL2Q8WU03 294 aa19.09■□□□□ 0.65
CHFR-218ENST00000540963 SMIM4Q8WVI0 70 aa19.09■□□□□ 0.65
CHFR-218ENST00000540963 CLUHP3Q96NS8 147 aa19.09■□□□□ 0.65
CHFR-218ENST00000540963 NIPSNAP3BQ9BS92 247 aa19.09■□□□□ 0.65
CHFR-218ENST00000540963 DKK2Q9UBU2 259 aa19.09■□□□□ 0.65
CHFR-218ENST00000540963 HSPG2P98160 4391 aa19.09■□□□□ 0.65
CHFR-218ENST00000540963 RGS5O15539 181 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 242.7 ms