RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 IGLV11-55A0A075B6I3 123 aa5.19□□□□□ -1.58
CLTCL1-206ENST00000540896 PSMB11A5LHX3 300 aa5.19□□□□□ -1.58
CLTCL1-206ENST00000540896 ZFP92A6NM28 416 aa5.19□□□□□ -1.58
CLTCL1-206ENST00000540896 PRSS46E5RG02 174 aa5.19□□□□□ -1.58
CLTCL1-206ENST00000540896 FNDC10F2Z333 226 aa5.19□□□□□ -1.58
CLTCL1-206ENST00000540896 C17orf112F2Z3M2 114 aa5.19□□□□□ -1.58
CLTCL1-206ENST00000540896 SCGB2A1O75556 95 aa5.19□□□□□ -1.58
CLTCL1-206ENST00000540896 NPBWR1P48145 328 aa5.19□□□□□ -1.58
CLTCL1-206ENST00000540896 CAMLGP49069 296 aa5.19□□□□□ -1.58
CLTCL1-206ENST00000540896 RND2P52198 227 aa5.19□□□□□ -1.58
CLTCL1-206ENST00000540896 CRIP2P52943 208 aaPredicted RBP5.19□□□□□ -1.58
CLTCL1-206ENST00000540896 TPPP2P59282 170 aa5.19□□□□□ -1.58
CLTCL1-206ENST00000540896 RPL15P61313 204 aaKnown RBP5.19□□□□□ -1.58
CLTCL1-206ENST00000540896 RHOGP84095 191 aa5.19□□□□□ -1.58
CLTCL1-206ENST00000540896 SRSF2Q01130 221 aaKnown RBP5.19□□□□□ -1.58
CLTCL1-206ENST00000540896 RUNX1Q01196 453 aa5.19□□□□□ -1.58
CLTCL1-206ENST00000540896 VWC2Q2TAL6 325 aa5.19□□□□□ -1.58
CLTCL1-206ENST00000540896 ANKRD39Q53RE8 183 aa5.19□□□□□ -1.58
CLTCL1-206ENST00000540896 Q56UQ5 140 aa5.19□□□□□ -1.58
CLTCL1-206ENST00000540896 PVRIGQ6DKI7 326 aa5.19□□□□□ -1.58
CLTCL1-206ENST00000540896 TEX261Q6UWH6 196 aa5.19□□□□□ -1.58
CLTCL1-206ENST00000540896 ALKAL2Q6UX46 152 aa5.19□□□□□ -1.58
CLTCL1-206ENST00000540896 ZNF329Q86UD4 541 aa5.19□□□□□ -1.58
CLTCL1-206ENST00000540896 PRIMA1Q86XR5 153 aa5.19□□□□□ -1.58
CLTCL1-206ENST00000540896 OR2G3Q8NGZ4 309 aa5.19□□□□□ -1.58
CLTCL1-206ENST00000540896 STOML3Q8TAV4 291 aa5.19□□□□□ -1.58
CLTCL1-206ENST00000540896 TMED6Q8WW62 240 aa5.19□□□□□ -1.58
CLTCL1-206ENST00000540896 NPIPB3Q92617 1050 aa5.19□□□□□ -1.58
CLTCL1-206ENST00000540896 TAF15Q92804 592 aaKnown RBP eCLIP5.19□□□□□ -1.58
CLTCL1-206ENST00000540896 WDR61Q9GZS3 305 aaKnown RBP5.19□□□□□ -1.58
CLTCL1-206ENST00000540896 SLC25A32Q9H2D1 315 aa5.19□□□□□ -1.58
CLTCL1-206ENST00000540896 FNDC4Q9H6D8 234 aaPredicted RBP5.19□□□□□ -1.58
CLTCL1-206ENST00000540896 WDR83OSQ9Y284 106 aa5.19□□□□□ -1.58
CLTCL1-206ENST00000540896 DMRT1Q9Y5R6 373 aa5.19□□□□□ -1.58
CLTCL1-206ENST00000540896 S4R3C0 116 aa5.19□□□□□ -1.58
CLTCL1-206ENST00000540896 ATRQ13535 2644 aa5.19□□□□□ -1.58
CLTCL1-206ENST00000540896 TRAV30A0A087WSZ9 112 aa5.18□□□□□ -1.58
CLTCL1-206ENST00000540896 FAM223BA6NKX1 122 aa5.18□□□□□ -1.58
CLTCL1-206ENST00000540896 H3BUA1 57 aa5.18□□□□□ -1.58
CLTCL1-206ENST00000540896 I3L2K1 104 aa5.18□□□□□ -1.58
CLTCL1-206ENST00000540896 K7EIM0 57 aa5.18□□□□□ -1.58
CLTCL1-206ENST00000540896 SOX15O60248 233 aa5.18□□□□□ -1.58
CLTCL1-206ENST00000540896 GNG7O60262 68 aa5.18□□□□□ -1.58
CLTCL1-206ENST00000540896 MPDU1O75352 247 aa5.18□□□□□ -1.58
CLTCL1-206ENST00000540896 CFDP00746 253 aaPredicted RBP5.18□□□□□ -1.58
CLTCL1-206ENST00000540896 IGHV3-23P01764 117 aa5.18□□□□□ -1.58
CLTCL1-206ENST00000540896 FABP1P07148 127 aa5.18□□□□□ -1.58
CLTCL1-206ENST00000540896 SEC11BP0C7V7 166 aa5.18□□□□□ -1.58
CLTCL1-206ENST00000540896 ATP6V0CP27449 155 aa5.18□□□□□ -1.58
CLTCL1-206ENST00000540896 OR10J1P30954 320 aa5.18□□□□□ -1.58
CLTCL1-206ENST00000540896 RAB9AP51151 201 aa5.18□□□□□ -1.58
CLTCL1-206ENST00000540896 MFAP4P55083 255 aa5.18□□□□□ -1.58
CLTCL1-206ENST00000540896 RAB14P61106 215 aa5.18□□□□□ -1.58
CLTCL1-206ENST00000540896 SUMO1P63165 101 aaKnown RBP5.18□□□□□ -1.58
CLTCL1-206ENST00000540896 DEFA5Q01523 94 aa5.18□□□□□ -1.58
CLTCL1-206ENST00000540896 C15orf32Q32M92 178 aa5.18□□□□□ -1.58
CLTCL1-206ENST00000540896 C19orf54Q5BKX5 351 aa5.18□□□□□ -1.58
CLTCL1-206ENST00000540896 AKR1C8PQ5T2L2 129 aa5.18□□□□□ -1.58
CLTCL1-206ENST00000540896 TEX38Q6PEX7 206 aa5.18□□□□□ -1.58
CLTCL1-206ENST00000540896 Q6ZSV7 163 aa5.18□□□□□ -1.58
CLTCL1-206ENST00000540896 ZNF767PQ75MW2 155 aa5.18□□□□□ -1.58
CLTCL1-206ENST00000540896 TMEM144Q7Z5S9 345 aa5.18□□□□□ -1.58
CLTCL1-206ENST00000540896 FAM223AQ8IWN6 122 aa5.18□□□□□ -1.58
CLTCL1-206ENST00000540896 ZNF680Q8NEM1 530 aa5.18□□□□□ -1.58
CLTCL1-206ENST00000540896 VN1R17PQ8TDU5 208 aa5.18□□□□□ -1.58
CLTCL1-206ENST00000540896 SCARB1Q8WTV0 552 aa5.18□□□□□ -1.58
CLTCL1-206ENST00000540896 EEF1AKMT3Q96AZ1 226 aa5.18□□□□□ -1.58
CLTCL1-206ENST00000540896 PHYHIPLQ96FC7 376 aa5.18□□□□□ -1.58
CLTCL1-206ENST00000540896 CXorf58Q96LI9 332 aa5.18□□□□□ -1.58
CLTCL1-206ENST00000540896 CLUHP3Q96NS8 147 aa5.18□□□□□ -1.58
CLTCL1-206ENST00000540896 GINS3Q9BRX5 216 aa5.18□□□□□ -1.58
CLTCL1-206ENST00000540896 RSG1Q9BU20 258 aa5.18□□□□□ -1.58
CLTCL1-206ENST00000540896 PARD6GQ9BYG4 376 aaPredicted RBP5.18□□□□□ -1.58
CLTCL1-206ENST00000540896 SH3BGRL3Q9H299 93 aa5.18□□□□□ -1.58
CLTCL1-206ENST00000540896 ARV1Q9H2C2 271 aa5.18□□□□□ -1.58
CLTCL1-206ENST00000540896 KCNIP2Q9NS61 270 aa5.18□□□□□ -1.58
CLTCL1-206ENST00000540896 C21orf62Q9NYP8 219 aa5.18□□□□□ -1.58
CLTCL1-206ENST00000540896 UBQLN2Q9UHD9 624 aa5.18□□□□□ -1.58
CLTCL1-206ENST00000540896 ZNF580Q9UK33 172 aa5.18□□□□□ -1.58
CLTCL1-206ENST00000540896 COL6A5A8TX70 2615 aa5.18□□□□□ -1.58
CLTCL1-206ENST00000540896 TRBV7-1A0A0A6YYK4 115 aa5.17□□□□□ -1.58
CLTCL1-206ENST00000540896 TRBV9A0A0B4J1U6 114 aa5.17□□□□□ -1.58
CLTCL1-206ENST00000540896 A0A0G2JLM5 398 aa5.17□□□□□ -1.58
CLTCL1-206ENST00000540896 TMEM89A2RUT3 159 aa5.17□□□□□ -1.58
CLTCL1-206ENST00000540896 MFSD2BA6NFX1 497 aa5.17□□□□□ -1.58
CLTCL1-206ENST00000540896 OR2T8A6NH00 312 aa5.17□□□□□ -1.58
CLTCL1-206ENST00000540896 AGPAT2O15120 278 aa5.17□□□□□ -1.58
CLTCL1-206ENST00000540896 IGHG4P01861 327 aa5.17□□□□□ -1.58
CLTCL1-206ENST00000540896 CLEC3BP05452 202 aa5.17□□□□□ -1.58
CLTCL1-206ENST00000540896 ELANEP08246 267 aa5.17□□□□□ -1.58
CLTCL1-206ENST00000540896 SPP1P10451 314 aa5.17□□□□□ -1.58
CLTCL1-206ENST00000540896 PPIFP30405 207 aaKnown RBP5.17□□□□□ -1.58
CLTCL1-206ENST00000540896 SLURP1P55000 103 aa5.17□□□□□ -1.58
CLTCL1-206ENST00000540896 ELLP55199 621 aaPredicted RBP5.17□□□□□ -1.58
CLTCL1-206ENST00000540896 SELENOTP62341 195 aa5.17□□□□□ -1.58
CLTCL1-206ENST00000540896 KIR3DS1Q14943 382 aa5.17□□□□□ -1.58
CLTCL1-206ENST00000540896 FFAR4Q5NUL3 377 aa5.17□□□□□ -1.58
CLTCL1-206ENST00000540896 FAM74A1Q5RGS3 127 aa5.17□□□□□ -1.58
CLTCL1-206ENST00000540896 TMEM182Q6ZP80 229 aaPredicted RBP5.17□□□□□ -1.58
CLTCL1-206ENST00000540896 Q6ZRG5 221 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms