RNA–Protein interactions for RNA: ENST00000540797.5

USP3-204, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2 BASIC

Gene USP3, Length 5,474 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-204ENST00000540797 TMEM101Q96IK0 257 aa11.57□□□□□ -0.56
USP3-204ENST00000540797 GNG5P63218 68 aa11.57□□□□□ -0.56
USP3-204ENST00000540797 FAM71F2Q6NXP2 309 aa11.57□□□□□ -0.56
USP3-204ENST00000540797 KCNS1Q96KK3 526 aa11.57□□□□□ -0.56
USP3-204ENST00000540797 RPP21Q9H633 154 aaKnown RBP11.57□□□□□ -0.56
USP3-204ENST00000540797 CD7P09564 240 aa11.57□□□□□ -0.56
USP3-204ENST00000540797 TAS2R60P59551 318 aa11.57□□□□□ -0.56
USP3-204ENST00000540797 TEX38Q6PEX7 206 aa11.57□□□□□ -0.56
USP3-204ENST00000540797 C5orf24Q7Z6I8 188 aa11.57□□□□□ -0.56
USP3-204ENST00000540797 SIGLEC15Q6ZMC9 328 aa11.57□□□□□ -0.56
USP3-204ENST00000540797 FABP5P3A8MUU1 101 aa11.56□□□□□ -0.56
USP3-204ENST00000540797 SLC17A3O00476 420 aa11.56□□□□□ -0.56
USP3-204ENST00000540797 PPP1R17O96001 155 aa11.56□□□□□ -0.56
USP3-204ENST00000540797 LY6G6FQ5SQ64 297 aa11.56□□□□□ -0.56
USP3-204ENST00000540797 REC114Q7Z4M0 266 aa11.56□□□□□ -0.56
USP3-204ENST00000540797 FER1L6-AS1Q8NA97 138 aa11.56□□□□□ -0.56
USP3-204ENST00000540797 ASCL2Q99929 193 aa11.56□□□□□ -0.56
USP3-204ENST00000540797 PKDREJQ9NTG1 2253 aa11.56□□□□□ -0.56
USP3-204ENST00000540797 A0A1B0GUT8 65 aa11.56□□□□□ -0.56
USP3-204ENST00000540797 WT1P19544 449 aaPredicted RBP11.56□□□□□ -0.56
USP3-204ENST00000540797 ATG101Q9BSB4 218 aa11.56□□□□□ -0.56
USP3-204ENST00000540797 MUC6Q6W4X9 2439 aa11.56□□□□□ -0.56
USP3-204ENST00000540797 PSMG4Q5JS54 123 aa11.56□□□□□ -0.56
USP3-204ENST00000540797 WDR83OSQ9Y284 106 aa11.56□□□□□ -0.56
USP3-204ENST00000540797 ANAPC1Q9H1A4 1944 aa11.56□□□□□ -0.56
USP3-204ENST00000540797 ZNF329Q86UD4 541 aa11.56□□□□□ -0.56
USP3-204ENST00000540797 ZNF383Q8NA42 475 aa11.56□□□□□ -0.56
USP3-204ENST00000540797 ZNF581Q9P0T4 197 aa11.56□□□□□ -0.56
USP3-204ENST00000540797 USF3Q68DE3 2245 aa11.56□□□□□ -0.56
USP3-204ENST00000540797 A6NDN8 102 aa11.55□□□□□ -0.56
USP3-204ENST00000540797 WISP1O95388 367 aa11.55□□□□□ -0.56
USP3-204ENST00000540797 CD33P20138 364 aa11.55□□□□□ -0.56
USP3-204ENST00000540797 KLF17Q5JT82 389 aaPredicted RBP11.55□□□□□ -0.56
USP3-204ENST00000540797 PIP4P2Q8N4L2 257 aa11.55□□□□□ -0.56
USP3-204ENST00000540797 FANCMQ8IYD8 2048 aa11.55□□□□□ -0.56
USP3-204ENST00000540797 TRAV3A0A0B4J244 114 aa11.55□□□□□ -0.56
USP3-204ENST00000540797 LGALS3P17931 250 aaKnown RBP11.55□□□□□ -0.56
USP3-204ENST00000540797 SPSB3Q6PJ21 355 aa11.55□□□□□ -0.56
USP3-204ENST00000540797 BIVMQ86UB2 503 aa11.55□□□□□ -0.56
USP3-204ENST00000540797 VPS25Q9BRG1 176 aa11.55□□□□□ -0.56
USP3-204ENST00000540797 SELENOKQ9Y6D0 94 aa11.55□□□□□ -0.56
USP3-204ENST00000540797 SRP19P09132 144 aaKnown RBP11.55□□□□□ -0.56
USP3-204ENST00000540797 CMC4P56277 68 aaPredicted RBP11.55□□□□□ -0.56
USP3-204ENST00000540797 PRELID3AQ96N28 172 aa11.55□□□□□ -0.56
USP3-204ENST00000540797 EPDR1Q9UM22 224 aa11.55□□□□□ -0.56
USP3-204ENST00000540797 SIGLEC9Q9Y336 463 aa11.55□□□□□ -0.56
USP3-204ENST00000540797 H0YIZ8 118 aa11.55□□□□□ -0.56
USP3-204ENST00000540797 FOXA3P55318 350 aaPredicted RBP11.55□□□□□ -0.56
USP3-204ENST00000540797 QRFPP83859 136 aa11.55□□□□□ -0.56
USP3-204ENST00000540797 RUSC1-AS1Q66K80 236 aa11.55□□□□□ -0.56
USP3-204ENST00000540797 IL36BQ9NZH7 164 aa11.55□□□□□ -0.56
USP3-204ENST00000540797 ZNF407Q9C0G0 2248 aa11.54□□□□□ -0.56
USP3-204ENST00000540797 TDGF1P13385 188 aa11.54□□□□□ -0.56
USP3-204ENST00000540797 SUMO2P61956 95 aaKnown RBP11.54□□□□□ -0.56
USP3-204ENST00000540797 EFNB3Q15768 340 aa11.54□□□□□ -0.56
USP3-204ENST00000540797 A0A1B0GWJ7 208 aa11.54□□□□□ -0.56
USP3-204ENST00000540797 LINC00473A8K010 186 aa11.54□□□□□ -0.56
USP3-204ENST00000540797 CBLN1P23435 193 aa11.54□□□□□ -0.56
USP3-204ENST00000540797 IFITM2Q01629 132 aa11.54□□□□□ -0.56
USP3-204ENST00000540797 Q6AWC8 147 aa11.54□□□□□ -0.56
USP3-204ENST00000540797 TMEM136Q6ZRR5 245 aa11.54□□□□□ -0.56
USP3-204ENST00000540797 C3orf56Q8N813 242 aa11.54□□□□□ -0.56
USP3-204ENST00000540797 FER1L5A0AVI2 2057 aa11.54□□□□□ -0.56
USP3-204ENST00000540797 KIR3DL3Q8N743 410 aa11.54□□□□□ -0.56
USP3-204ENST00000540797 KLHL30-AS1Q8NEE0 82 aa11.54□□□□□ -0.56
USP3-204ENST00000540797 TRAV21A0A0B4J279 112 aa11.54□□□□□ -0.56
USP3-204ENST00000540797 Q8TCH9 128 aa11.54□□□□□ -0.56
USP3-204ENST00000540797 RAB37Q96AX2 223 aa11.54□□□□□ -0.56
USP3-204ENST00000540797 TRBV7-1A0A0A6YYK4 115 aa11.53□□□□□ -0.56
USP3-204ENST00000540797 OVOL1O14753 267 aa11.53□□□□□ -0.56
USP3-204ENST00000540797 UQCRFS1P47985 274 aa11.53□□□□□ -0.56
USP3-204ENST00000540797 FBLN7Q53RD9 439 aa11.53□□□□□ -0.56
USP3-204ENST00000540797 MEIG1Q5JSS6 88 aa11.53□□□□□ -0.56
USP3-204ENST00000540797 TREML4Q6UXN2 200 aa11.53□□□□□ -0.56
USP3-204ENST00000540797 ASCL4Q6XD76 172 aa11.53□□□□□ -0.56
USP3-204ENST00000540797 ZMAT5Q9UDW3 170 aaKnown RBP11.53□□□□□ -0.56
USP3-204ENST00000540797 PSG1P11464 419 aa11.53□□□□□ -0.56
USP3-204ENST00000540797 UBE2E1P51965 193 aa11.53□□□□□ -0.56
USP3-204ENST00000540797 LCNL1Q6ZST4 164 aa11.53□□□□□ -0.56
USP3-204ENST00000540797 OR5AN1Q8NGI8 311 aa11.53□□□□□ -0.56
USP3-204ENST00000540797 IGKV1-5P01602 117 aa11.53□□□□□ -0.56
USP3-204ENST00000540797 GATA4P43694 442 aa11.53□□□□□ -0.56
USP3-204ENST00000540797 USMG5Q96IX5 58 aa11.53□□□□□ -0.56
USP3-204ENST00000540797 A0A1W2PRE2 83 aa11.53□□□□□ -0.56
USP3-204ENST00000540797 K7EM74 188 aa11.53□□□□□ -0.56
USP3-204ENST00000540797 PRSS2P07478 247 aa11.53□□□□□ -0.56
USP3-204ENST00000540797 GCSAMLQ5JQS6 135 aa11.53□□□□□ -0.56
USP3-204ENST00000540797 IGF2-ASQ6U949 168 aa11.53□□□□□ -0.56
USP3-204ENST00000540797 WFDC12Q8WWY7 111 aa11.53□□□□□ -0.56
USP3-204ENST00000540797 PSG8Q9UQ74 426 aa11.53□□□□□ -0.56
USP3-204ENST00000540797 A0A087X0M5 115 aa11.53□□□□□ -0.56
USP3-204ENST00000540797 A0A1B0GX30 115 aa11.53□□□□□ -0.56
USP3-204ENST00000540797 RPL15P61313 204 aaKnown RBP11.53□□□□□ -0.56
USP3-204ENST00000540797 CIRBPQ14011 172 aaKnown RBP11.53□□□□□ -0.56
USP3-204ENST00000540797 Q6ZR03 302 aa11.53□□□□□ -0.56
USP3-204ENST00000540797 IFT22Q9H7X7 185 aa11.53□□□□□ -0.56
USP3-204ENST00000540797 SMIM6P0DI80 62 aa11.52□□□□□ -0.56
USP3-204ENST00000540797 RNF114Q9Y508 228 aa11.52□□□□□ -0.56
USP3-204ENST00000540797 F11RQ9Y624 299 aaKnown RBP11.52□□□□□ -0.56
USP3-204ENST00000540797 C7orf71A4D174 169 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms