RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 PRR20AP86496 221 aa11.19□□□□□ -0.62
CYB561A3-216ENST00000540755 ECSCRQ19T08 205 aa11.19□□□□□ -0.62
CYB561A3-216ENST00000540755 ACOT6Q3I5F7 207 aaPredicted RBP11.19□□□□□ -0.62
CYB561A3-216ENST00000540755 C10orf91Q5T1B1 145 aa11.19□□□□□ -0.62
CYB561A3-216ENST00000540755 NPIPB3Q92617 1050 aa11.19□□□□□ -0.62
CYB561A3-216ENST00000540755 LINC00052Q96N35 136 aa11.19□□□□□ -0.62
CYB561A3-216ENST00000540755 THYN1Q9P016 225 aa11.19□□□□□ -0.62
CYB561A3-216ENST00000540755 MRPL36Q9P0J6 103 aaKnown RBP11.19□□□□□ -0.62
CYB561A3-216ENST00000540755 SLC45A2Q9UMX9 530 aa11.19□□□□□ -0.62
CYB561A3-216ENST00000540755 LINC01548A6NM66 108 aa11.18□□□□□ -0.62
CYB561A3-216ENST00000540755 K7EIM0 57 aa11.18□□□□□ -0.62
CYB561A3-216ENST00000540755 OR10J1P30954 320 aa11.18□□□□□ -0.62
CYB561A3-216ENST00000540755 TAGLN2P37802 199 aaKnown RBP11.18□□□□□ -0.62
CYB561A3-216ENST00000540755 SRSF2Q01130 221 aaKnown RBP11.18□□□□□ -0.62
CYB561A3-216ENST00000540755 C19orf54Q5BKX5 351 aa11.18□□□□□ -0.62
CYB561A3-216ENST00000540755 MIC13Q5XKP0 118 aa11.18□□□□□ -0.62
CYB561A3-216ENST00000540755 STPG3Q8N7X2 389 aa11.18□□□□□ -0.62
CYB561A3-216ENST00000540755 OR5T1Q8NG75 326 aa11.18□□□□□ -0.62
CYB561A3-216ENST00000540755 OR4X1Q8NH49 305 aa11.18□□□□□ -0.62
CYB561A3-216ENST00000540755 TREM1Q9NP99 234 aa11.18□□□□□ -0.62
CYB561A3-216ENST00000540755 CARHSP1Q9Y2V2 147 aaKnown RBP11.18□□□□□ -0.62
CYB561A3-216ENST00000540755 IGKV1D-37A0A075B6S9 117 aa11.17□□□□□ -0.62
CYB561A3-216ENST00000540755 TCRBV4S1A1TA0A5B7 111 aa11.17□□□□□ -0.62
CYB561A3-216ENST00000540755 YIF1AO95070 293 aa11.17□□□□□ -0.62
CYB561A3-216ENST00000540755 HNF1AP20823 631 aa11.17□□□□□ -0.62
CYB561A3-216ENST00000540755 C9orf152Q5JTZ5 239 aa11.17□□□□□ -0.62
CYB561A3-216ENST00000540755 CYP2G1PQ6ZSU1 146 aa11.17□□□□□ -0.62
CYB561A3-216ENST00000540755 SLC35E3Q7Z769 313 aa11.17□□□□□ -0.62
CYB561A3-216ENST00000540755 SVBPQ8N300 66 aa11.17□□□□□ -0.62
CYB561A3-216ENST00000540755 OR10G4Q8NGN3 311 aa11.17□□□□□ -0.62
CYB561A3-216ENST00000540755 OR10G9Q8NGN4 311 aa11.17□□□□□ -0.62
CYB561A3-216ENST00000540755 OR10G7Q8NGN6 311 aa11.17□□□□□ -0.62
CYB561A3-216ENST00000540755 RCC1LQ96I51 464 aaKnown RBP11.17□□□□□ -0.62
CYB561A3-216ENST00000540755 NARS2Q96I59 477 aaKnown RBP11.17□□□□□ -0.62
CYB561A3-216ENST00000540755 TRGV9Q99603 122 aa11.17□□□□□ -0.62
CYB561A3-216ENST00000540755 SLC39A9Q9NUM3 307 aa11.17□□□□□ -0.62
CYB561A3-216ENST00000540755 ZNF580Q9UK33 172 aa11.17□□□□□ -0.62
CYB561A3-216ENST00000540755 IGHV3-21A0A0B4J1V1 117 aa11.16□□□□□ -0.62
CYB561A3-216ENST00000540755 TRAV41A0A0B4J266 112 aa11.16□□□□□ -0.62
CYB561A3-216ENST00000540755 ZFP92A6NM28 416 aa11.16□□□□□ -0.62
CYB561A3-216ENST00000540755 G3V318 75 aa11.16□□□□□ -0.62
CYB561A3-216ENST00000540755 IGHV3-48P01763 117 aa11.16□□□□□ -0.62
CYB561A3-216ENST00000540755 LINC00869P0C866 280 aa11.16□□□□□ -0.62
CYB561A3-216ENST00000540755 SRD5A1P18405 259 aa11.16□□□□□ -0.62
CYB561A3-216ENST00000540755 SRP14P37108 136 aaKnown RBP11.16□□□□□ -0.62
CYB561A3-216ENST00000540755 BLCAPP62952 87 aa11.16□□□□□ -0.62
CYB561A3-216ENST00000540755 ZNF726P1Q15940 193 aa11.16□□□□□ -0.62
CYB561A3-216ENST00000540755 GUK1Q16774 197 aa11.16□□□□□ -0.62
CYB561A3-216ENST00000540755 RPP25LQ8N5L8 163 aaKnown RBP11.16□□□□□ -0.62
CYB561A3-216ENST00000540755 TMEM86BQ8N661 226 aa11.16□□□□□ -0.62
CYB561A3-216ENST00000540755 ACTR3CQ9C0K3 210 aaPredicted RBP11.16□□□□□ -0.62
CYB561A3-216ENST00000540755 TRBV9A0A0B4J1U6 114 aa11.15□□□□□ -0.62
CYB561A3-216ENST00000540755 CTXND1A0A1B0GTU2 59 aa11.15□□□□□ -0.62
CYB561A3-216ENST00000540755 SEC14L6B5MCN3 397 aa11.15□□□□□ -0.62
CYB561A3-216ENST00000540755 HOXA3O43365 443 aaPredicted RBP11.15□□□□□ -0.62
CYB561A3-216ENST00000540755 CLN5O75503 358 aa11.15□□□□□ -0.62
CYB561A3-216ENST00000540755 SELENOTP62341 195 aa11.15□□□□□ -0.62
CYB561A3-216ENST00000540755 SPSB3Q6PJ21 355 aa11.15□□□□□ -0.62
CYB561A3-216ENST00000540755 TENM1Q9UKZ4 2725 aa11.15□□□□□ -0.63
CYB561A3-216ENST00000540755 F8W036 122 aa11.14□□□□□ -0.63
CYB561A3-216ENST00000540755 AP4M1O00189 453 aa11.14□□□□□ -0.63
CYB561A3-216ENST00000540755 OR2J3O76001 311 aa11.14□□□□□ -0.63
CYB561A3-216ENST00000540755 BRI3O95415 125 aa11.14□□□□□ -0.63
CYB561A3-216ENST00000540755 IFNA1P01562 189 aa11.14□□□□□ -0.63
CYB561A3-216ENST00000540755 SSX7Q7RTT5 188 aa11.14□□□□□ -0.63
CYB561A3-216ENST00000540755 SIGLECL1Q8N7X8 197 aa11.14□□□□□ -0.63
CYB561A3-216ENST00000540755 VN1R17PQ8TDU5 208 aa11.14□□□□□ -0.63
CYB561A3-216ENST00000540755 SFT2D1Q8WV19 159 aa11.14□□□□□ -0.63
CYB561A3-216ENST00000540755 EIF5A2Q9GZV4 153 aaKnown RBP11.14□□□□□ -0.63
CYB561A3-216ENST00000540755 TNFRSF19Q9NS68 423 aa11.14□□□□□ -0.63
CYB561A3-216ENST00000540755 RBFOX3A6NFN3 312 aa11.13□□□□□ -0.63
CYB561A3-216ENST00000540755 H3BUA1 57 aa11.13□□□□□ -0.63
CYB561A3-216ENST00000540755 NDUFB8O95169 186 aa11.13□□□□□ -0.63
CYB561A3-216ENST00000540755 SNAPINO95295 136 aa11.13□□□□□ -0.63
CYB561A3-216ENST00000540755 APOC3P02656 99 aa11.13□□□□□ -0.63
CYB561A3-216ENST00000540755 IGLC1P0CG04 106 aa11.13□□□□□ -0.63
CYB561A3-216ENST00000540755 FCGR2BP31994 310 aaPredicted RBP11.13□□□□□ -0.63
CYB561A3-216ENST00000540755 NPBWR1P48145 328 aa11.13□□□□□ -0.63
CYB561A3-216ENST00000540755 CDC34P49427 236 aaPredicted RBP11.13□□□□□ -0.63
CYB561A3-216ENST00000540755 PPT1P50897 306 aa11.13□□□□□ -0.63
CYB561A3-216ENST00000540755 MFAP4P55083 255 aa11.13□□□□□ -0.63
CYB561A3-216ENST00000540755 SCGB2A2Q13296 93 aa11.13□□□□□ -0.63
CYB561A3-216ENST00000540755 KHDC3LQ587J8 217 aa11.13□□□□□ -0.63
CYB561A3-216ENST00000540755 GCSAMLQ5JQS6 135 aa11.13□□□□□ -0.63
CYB561A3-216ENST00000540755 FAM122CQ6P4D5 195 aa11.13□□□□□ -0.63
CYB561A3-216ENST00000540755 RBMS3Q6XE24 437 aaKnown RBP11.13□□□□□ -0.63
CYB561A3-216ENST00000540755 C19orf24Q9BVV8 132 aa11.13□□□□□ -0.63
CYB561A3-216ENST00000540755 SLC35B3Q9H1N7 401 aa11.13□□□□□ -0.63
CYB561A3-216ENST00000540755 FBXL7Q9UJT9 491 aa11.13□□□□□ -0.63
CYB561A3-216ENST00000540755 TRAV30A0A087WSZ9 112 aa11.12□□□□□ -0.63
CYB561A3-216ENST00000540755 MAP1LC3B2A6NCE7 125 aa11.12□□□□□ -0.63
CYB561A3-216ENST00000540755 HSPB1P04792 205 aaKnown RBP11.12□□□□□ -0.63
CYB561A3-216ENST00000540755 GATA2P23769 480 aaPredicted RBP11.12□□□□□ -0.63
CYB561A3-216ENST00000540755 PPIFP30405 207 aaKnown RBP11.12□□□□□ -0.63
CYB561A3-216ENST00000540755 ZNF90Q03938 601 aa11.12□□□□□ -0.63
CYB561A3-216ENST00000540755 LCN15Q6UWW0 184 aa11.12□□□□□ -0.63
CYB561A3-216ENST00000540755 Q6ZS46 218 aa11.12□□□□□ -0.63
CYB561A3-216ENST00000540755 NECAP1Q8NC96 275 aa11.12□□□□□ -0.63
CYB561A3-216ENST00000540755 RAB24Q969Q5 203 aa11.12□□□□□ -0.63
CYB561A3-216ENST00000540755 TXN2Q99757 166 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms