RNA–Protein interactions for RNA: ENST00000540638.6

EPB41L3-204, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EPB41L3, Length 3,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-204ENST00000540638 TMEM177Q53S58 311 aa13.77□□□□□ -0.21
EPB41L3-204ENST00000540638 MMD2Q8IY49 270 aa13.77□□□□□ -0.21
EPB41L3-204ENST00000540638 DOPEY2Q9Y3R5 2298 aa13.76□□□□□ -0.21
EPB41L3-204ENST00000540638 PRR20EP86478 221 aa13.76□□□□□ -0.21
EPB41L3-204ENST00000540638 PRR20CP86479 221 aa13.76□□□□□ -0.21
EPB41L3-204ENST00000540638 PRR20DP86480 221 aa13.76□□□□□ -0.21
EPB41L3-204ENST00000540638 PRR20BP86481 221 aa13.76□□□□□ -0.21
EPB41L3-204ENST00000540638 PRR20AP86496 221 aa13.76□□□□□ -0.21
EPB41L3-204ENST00000540638 OR1L6Q8NGR2 347 aa13.76□□□□□ -0.21
EPB41L3-204ENST00000540638 TMEM167AQ8TBQ9 72 aa13.76□□□□□ -0.21
EPB41L3-204ENST00000540638 SAMD10Q9BYL1 202 aa13.76□□□□□ -0.21
EPB41L3-204ENST00000540638 LCN2P80188 198 aa13.76□□□□□ -0.21
EPB41L3-204ENST00000540638 S100A12P80511 92 aa13.76□□□□□ -0.21
EPB41L3-204ENST00000540638 PPP1R27Q86WC6 154 aa13.76□□□□□ -0.21
EPB41L3-204ENST00000540638 EAF1Q96JC9 268 aaPredicted RBP13.76□□□□□ -0.21
EPB41L3-204ENST00000540638 IGHV3OR16-10A0A075B7F0 116 aa13.75□□□□□ -0.21
EPB41L3-204ENST00000540638 GGTLC3B5MD39 225 aa13.75□□□□□ -0.21
EPB41L3-204ENST00000540638 CAMPP49913 170 aa13.75□□□□□ -0.21
EPB41L3-204ENST00000540638 HIST1H2BLQ99880 126 aa13.75□□□□□ -0.21
EPB41L3-204ENST00000540638 PGPA6NDG6 321 aa13.75□□□□□ -0.21
EPB41L3-204ENST00000540638 C22orf46C9J442 243 aa13.75□□□□□ -0.21
EPB41L3-204ENST00000540638 CNN1P51911 297 aaKnown RBP13.75□□□□□ -0.21
EPB41L3-204ENST00000540638 NCOR1P1Q9H4R4 102 aa13.75□□□□□ -0.21
EPB41L3-204ENST00000540638 AMMECR1Q9Y4X0 333 aaPredicted RBP13.75□□□□□ -0.21
EPB41L3-204ENST00000540638 OR51M1Q9H341 326 aa13.75□□□□□ -0.21
EPB41L3-204ENST00000540638 JKAMPQ9P055 326 aa13.75□□□□□ -0.21
EPB41L3-204ENST00000540638 LIPFP07098 398 aa13.74□□□□□ -0.21
EPB41L3-204ENST00000540638 HTR1DP28221 377 aa13.74□□□□□ -0.21
EPB41L3-204ENST00000540638 POU2AF1Q16633 256 aa13.74□□□□□ -0.21
EPB41L3-204ENST00000540638 RUSC1-AS1Q66K80 236 aa13.74□□□□□ -0.21
EPB41L3-204ENST00000540638 DCHS2Q6V1P9 2916 aa13.74□□□□□ -0.21
EPB41L3-204ENST00000540638 TMEM256Q8N2U0 113 aa13.74□□□□□ -0.21
EPB41L3-204ENST00000540638 SRSF12Q8WXF0 261 aaKnown RBP13.74□□□□□ -0.21
EPB41L3-204ENST00000540638 BUB1B-PAK6H3BSN5 160 aa13.74□□□□□ -0.21
EPB41L3-204ENST00000540638 K7EN84 100 aa13.74□□□□□ -0.21
EPB41L3-204ENST00000540638 LGALS7P47929 136 aa13.74□□□□□ -0.21
EPB41L3-204ENST00000540638 USF2Q15853 346 aaPredicted RBP13.74□□□□□ -0.21
EPB41L3-204ENST00000540638 RPEL1Q2QD12 228 aa13.74□□□□□ -0.21
EPB41L3-204ENST00000540638 TPPP3Q9BW30 176 aa13.74□□□□□ -0.21
EPB41L3-204ENST00000540638 TGOLN2O43493 480 aa13.74□□□□□ -0.21
EPB41L3-204ENST00000540638 SRP14P37108 136 aaKnown RBP13.74□□□□□ -0.21
EPB41L3-204ENST00000540638 TMEM30BQ3MIR4 351 aa13.74□□□□□ -0.21
EPB41L3-204ENST00000540638 ZNF596Q8TC21 504 aa13.74□□□□□ -0.21
EPB41L3-204ENST00000540638 ADORA2A-AS1P86434 159 aa13.73□□□□□ -0.21
EPB41L3-204ENST00000540638 IBA57Q5T440 356 aaKnown RBP13.73□□□□□ -0.21
EPB41L3-204ENST00000540638 OR1L4Q8NGR5 311 aa13.73□□□□□ -0.21
EPB41L3-204ENST00000540638 SIGLEC9Q9Y336 463 aa13.73□□□□□ -0.21
EPB41L3-204ENST00000540638 LOC105371242A0A075B767 164 aa13.72□□□□□ -0.21
EPB41L3-204ENST00000540638 ELOA3CA0A087WX78 387 aaPredicted RBP13.72□□□□□ -0.21
EPB41L3-204ENST00000540638 GPR6P46095 362 aaPredicted RBP13.72□□□□□ -0.21
EPB41L3-204ENST00000540638 UCNP55089 124 aa13.72□□□□□ -0.21
EPB41L3-204ENST00000540638 WNT10AQ9GZT5 417 aa13.72□□□□□ -0.21
EPB41L3-204ENST00000540638 SEBOXQ9HB31 216 aaPredicted RBP13.72□□□□□ -0.21
EPB41L3-204ENST00000540638 NTF3P20783 257 aa13.72□□□□□ -0.21
EPB41L3-204ENST00000540638 ADMP35318 185 aa13.72□□□□□ -0.21
EPB41L3-204ENST00000540638 AARDQ4LEZ3 155 aa13.72□□□□□ -0.21
EPB41L3-204ENST00000540638 TMEM18Q96B42 140 aa13.72□□□□□ -0.21
EPB41L3-204ENST00000540638 AMBPP02760 352 aa13.71□□□□□ -0.21
EPB41L3-204ENST00000540638 HIST1H1BP16401 226 aaKnown RBP13.71□□□□□ -0.21
EPB41L3-204ENST00000540638 TMEM183AQ8IXX5 376 aa13.71□□□□□ -0.21
EPB41L3-204ENST00000540638 CACNG8Q8WXS5 425 aa13.71□□□□□ -0.21
EPB41L3-204ENST00000540638 RASL11BQ9BPW5 248 aa13.71□□□□□ -0.21
EPB41L3-204ENST00000540638 MRPL18Q9H0U6 180 aaKnown RBP13.71□□□□□ -0.21
EPB41L3-204ENST00000540638 TCRBV4S1A1TA0A5B7 111 aa13.71□□□□□ -0.21
EPB41L3-204ENST00000540638 HYPMO75409 117 aa13.71□□□□□ -0.21
EPB41L3-204ENST00000540638 CRISP2P16562 243 aa13.71□□□□□ -0.21
EPB41L3-204ENST00000540638 MAS1LP35410 378 aa13.71□□□□□ -0.21
EPB41L3-204ENST00000540638 UQCRFS1P47985 274 aa13.71□□□□□ -0.21
EPB41L3-204ENST00000540638 DEFA6Q01524 100 aa13.71□□□□□ -0.21
EPB41L3-204ENST00000540638 CMTM2Q8TAZ6 248 aa13.71□□□□□ -0.21
EPB41L3-204ENST00000540638 ZNF503Q96F45 646 aa13.71□□□□□ -0.21
EPB41L3-204ENST00000540638 IGLV2-23P01705 113 aa13.71□□□□□ -0.22
EPB41L3-204ENST00000540638 SH2D7A6NKC9 451 aaPredicted RBP13.7□□□□□ -0.22
EPB41L3-204ENST00000540638 CGB1A6NKQ9 187 aa13.7□□□□□ -0.22
EPB41L3-204ENST00000540638 ST6GALNAC6Q969X2 333 aa13.7□□□□□ -0.22
EPB41L3-204ENST00000540638 TLN2Q9Y4G6 2542 aa13.7□□□□□ -0.22
EPB41L3-204ENST00000540638 BSNQ9UPA5 3926 aa13.7□□□□□ -0.22
EPB41L3-204ENST00000540638 PMCHP20382 165 aa13.7□□□□□ -0.22
EPB41L3-204ENST00000540638 Q56UQ5 140 aa13.69□□□□□ -0.22
EPB41L3-204ENST00000540638 ETFRF1Q6IPR1 90 aa13.69□□□□□ -0.22
EPB41L3-204ENST00000540638 C11orf42Q8N5U0 333 aa13.69□□□□□ -0.22
EPB41L3-204ENST00000540638 TXNDC17Q9BRA2 123 aa13.69□□□□□ -0.22
EPB41L3-204ENST00000540638 DPM3Q9P2X0 92 aa13.69□□□□□ -0.22
EPB41L3-204ENST00000540638 LRRK2Q5S007 2527 aa13.69□□□□□ -0.22
EPB41L3-204ENST00000540638 TRAV8-1A0A0A6YYK1 113 aa13.69□□□□□ -0.22
EPB41L3-204ENST00000540638 TSTD3H0UI37 97 aa13.69□□□□□ -0.22
EPB41L3-204ENST00000540638 PERPQ96FX8 193 aa13.69□□□□□ -0.22
EPB41L3-204ENST00000540638 ISLRO14498 428 aa13.69□□□□□ -0.22
EPB41L3-204ENST00000540638 GGCTO75223 188 aaKnown RBP13.69□□□□□ -0.22
EPB41L3-204ENST00000540638 SSX8Q7RTT4 187 aa13.69□□□□□ -0.22
EPB41L3-204ENST00000540638 RNASEH2CQ8TDP1 164 aaKnown RBP13.69□□□□□ -0.22
EPB41L3-204ENST00000540638 MS4A10Q96PG2 267 aa13.69□□□□□ -0.22
EPB41L3-204ENST00000540638 RBM14Q96PK6 669 aaKnown RBP13.69□□□□□ -0.22
EPB41L3-204ENST00000540638 SLC25A2Q9BXI2 301 aa13.69□□□□□ -0.22
EPB41L3-204ENST00000540638 LINC00574Q9H8X3 128 aa13.69□□□□□ -0.22
EPB41L3-204ENST00000540638 ZNF331Q9NQX6 463 aaPredicted RBP13.69□□□□□ -0.22
EPB41L3-204ENST00000540638 IGLC7A0M8Q6 106 aa13.68□□□□□ -0.22
EPB41L3-204ENST00000540638 NBEAP1P0C6P0 100 aa13.68□□□□□ -0.22
EPB41L3-204ENST00000540638 MFAP2P55001 183 aa13.68□□□□□ -0.22
EPB41L3-204ENST00000540638 RPL19P84098 196 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms