RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 AKAP13Q12802 2813 aa9.93□□□□□ -0.82
NPC1-202ENST00000540608 TRAV34A0A0B4J273 112 aa9.92□□□□□ -0.82
NPC1-202ENST00000540608 CGB1A6NKQ9 187 aa9.92□□□□□ -0.82
NPC1-202ENST00000540608 NTF3P20783 257 aa9.92□□□□□ -0.82
NPC1-202ENST00000540608 MMDQ15546 238 aa9.92□□□□□ -0.82
NPC1-202ENST00000540608 KLHDC1Q8N7A1 406 aa9.92□□□□□ -0.82
NPC1-202ENST00000540608 OR4C13Q8NGP0 309 aa9.92□□□□□ -0.82
NPC1-202ENST00000540608 DYSFO75923 2080 aa9.92□□□□□ -0.82
NPC1-202ENST00000540608 K7EM74 188 aa9.92□□□□□ -0.82
NPC1-202ENST00000540608 CD40P25942 277 aa9.92□□□□□ -0.82
NPC1-202ENST00000540608 MYCNOSP40205 109 aa9.92□□□□□ -0.82
NPC1-202ENST00000540608 TNXAQ16473 311 aa9.92□□□□□ -0.82
NPC1-202ENST00000540608 CYB5R2Q6BCY4 276 aa9.92□□□□□ -0.82
NPC1-202ENST00000540608 WNT10AQ9GZT5 417 aa9.92□□□□□ -0.82
NPC1-202ENST00000540608 OR2J3O76001 311 aa9.92□□□□□ -0.82
NPC1-202ENST00000540608 HIST1H1EP10412 219 aaKnown RBP9.92□□□□□ -0.82
NPC1-202ENST00000540608 BTF3P20290 206 aaKnown RBP9.92□□□□□ -0.82
NPC1-202ENST00000540608 REG1BP48304 166 aa9.92□□□□□ -0.82
NPC1-202ENST00000540608 FAM27E3Q08E93 113 aa9.92□□□□□ -0.82
NPC1-202ENST00000540608 C1orf185Q5T7R7 199 aa9.92□□□□□ -0.82
NPC1-202ENST00000540608 TMEM200BQ69YZ2 307 aa9.92□□□□□ -0.82
NPC1-202ENST00000540608 IGF2-ASQ6U949 168 aa9.92□□□□□ -0.82
NPC1-202ENST00000540608 PDPNQ86YL7 162 aa9.92□□□□□ -0.82
NPC1-202ENST00000540608 CLEC7AQ9BXN2 247 aa9.92□□□□□ -0.82
NPC1-202ENST00000540608 C7orf69Q9H7B7 122 aa9.92□□□□□ -0.82
NPC1-202ENST00000540608 ZFP30Q9Y2G7 519 aa9.92□□□□□ -0.82
NPC1-202ENST00000540608 CCL3L1P16619 93 aa9.91□□□□□ -0.82
NPC1-202ENST00000540608 PMCHL1Q16048 86 aa9.91□□□□□ -0.82
NPC1-202ENST00000540608 IGFL3Q6UXB1 125 aa9.91□□□□□ -0.82
NPC1-202ENST00000540608 Q6ZN92 141 aa9.91□□□□□ -0.82
NPC1-202ENST00000540608 RBMXL3Q8N7X1 1067 aaKnown RBP9.91□□□□□ -0.82
NPC1-202ENST00000540608 NUP37Q8NFH4 326 aa9.91□□□□□ -0.82
NPC1-202ENST00000540608 TXN2Q99757 166 aa9.91□□□□□ -0.82
NPC1-202ENST00000540608 SAP30LQ9HAJ7 183 aa9.91□□□□□ -0.82
NPC1-202ENST00000540608 ATMQ13315 3056 aa9.91□□□□□ -0.82
NPC1-202ENST00000540608 RP1L1Q8IWN7 2480 aaPredicted RBP9.91□□□□□ -0.82
NPC1-202ENST00000540608 PLCE1Q9P212 2302 aa9.91□□□□□ -0.82
NPC1-202ENST00000540608 TNFRSF1AP19438 455 aa9.91□□□□□ -0.82
NPC1-202ENST00000540608 TFPI2P48307 235 aa9.91□□□□□ -0.82
NPC1-202ENST00000540608 CCL8P80075 99 aa9.91□□□□□ -0.82
NPC1-202ENST00000540608 FAM71F2Q6NXP2 309 aa9.91□□□□□ -0.82
NPC1-202ENST00000540608 LINC00305Q7Z4B0 112 aa9.91□□□□□ -0.82
NPC1-202ENST00000540608 ATP5L2Q7Z4Y8 100 aa9.91□□□□□ -0.82
NPC1-202ENST00000540608 STXBP6Q8NFX7 210 aa9.91□□□□□ -0.82
NPC1-202ENST00000540608 ALKBH7Q9BT30 221 aaPredicted RBP9.91□□□□□ -0.82
NPC1-202ENST00000540608 PPP1R14DQ9NXH3 145 aa9.91□□□□□ -0.82
NPC1-202ENST00000540608 EPDR1Q9UM22 224 aa9.91□□□□□ -0.82
NPC1-202ENST00000540608 ZNF292O60281 2723 aa9.9□□□□□ -0.82
NPC1-202ENST00000540608 HIGD1CA8MV81 97 aa9.9□□□□□ -0.82
NPC1-202ENST00000540608 HSBP1O75506 76 aa9.9□□□□□ -0.82
NPC1-202ENST00000540608 IGLV2-23P01705 113 aa9.9□□□□□ -0.82
NPC1-202ENST00000540608 IGHV3-48P01763 117 aa9.9□□□□□ -0.82
NPC1-202ENST00000540608 HNRNPA3P51991 378 aaKnown RBP9.9□□□□□ -0.82
NPC1-202ENST00000540608 ZNF841Q6ZN19 808 aa9.9□□□□□ -0.82
NPC1-202ENST00000540608 Q6ZS92 163 aa9.9□□□□□ -0.82
NPC1-202ENST00000540608 ZCCHC24Q8N2G6 241 aaKnown RBP9.9□□□□□ -0.82
NPC1-202ENST00000540608 OR10X1Q8NGY0 326 aa9.9□□□□□ -0.82
NPC1-202ENST00000540608 TMEM186Q96B77 213 aa9.9□□□□□ -0.82
NPC1-202ENST00000540608 SMIM12Q96EX1 92 aa9.9□□□□□ -0.82
NPC1-202ENST00000540608 MRPL36Q9P0J6 103 aaKnown RBP9.9□□□□□ -0.82
NPC1-202ENST00000540608 KLF12Q9Y4X4 402 aa9.9□□□□□ -0.82
NPC1-202ENST00000540608 C10orf55Q5SWW7 151 aa9.9□□□□□ -0.83
NPC1-202ENST00000540608 PRR27Q6MZM9 219 aa9.9□□□□□ -0.83
NPC1-202ENST00000540608 LINC00311Q8N616 119 aa9.9□□□□□ -0.83
NPC1-202ENST00000540608 C8orf31Q8N9H6 132 aa9.9□□□□□ -0.83
NPC1-202ENST00000540608 ZNF596Q8TC21 504 aa9.9□□□□□ -0.83
NPC1-202ENST00000540608 TNFRSF19Q9NS68 423 aa9.9□□□□□ -0.83
NPC1-202ENST00000540608 LAMTOR2Q9Y2Q5 125 aa9.9□□□□□ -0.83
NPC1-202ENST00000540608 FAM181BA6NEQ2 426 aa9.89□□□□□ -0.83
NPC1-202ENST00000540608 FCN3O75636 299 aa9.89□□□□□ -0.83
NPC1-202ENST00000540608 UBE2G1P62253 170 aa9.89□□□□□ -0.83
NPC1-202ENST00000540608 GNG5P63218 68 aa9.89□□□□□ -0.83
NPC1-202ENST00000540608 DIAPH2-AS1Q14236 149 aa9.89□□□□□ -0.83
NPC1-202ENST00000540608 STPG4Q8N801 248 aa9.89□□□□□ -0.83
NPC1-202ENST00000540608 SSUH2Q9Y2M2 353 aa9.89□□□□□ -0.83
NPC1-202ENST00000540608 WASHC3Q9Y3C0 194 aa9.89□□□□□ -0.83
NPC1-202ENST00000540608 A0A1B0GXF2 115 aa9.89□□□□□ -0.83
NPC1-202ENST00000540608 VWC2LB2RUY7 222 aa9.89□□□□□ -0.83
NPC1-202ENST00000540608 M0R2Z0 102 aa9.89□□□□□ -0.83
NPC1-202ENST00000540608 CORTO00230 105 aa9.89□□□□□ -0.83
NPC1-202ENST00000540608 CEACAM8P31997 349 aaPredicted RBP9.89□□□□□ -0.83
NPC1-202ENST00000540608 GPR6P46095 362 aaPredicted RBP9.89□□□□□ -0.83
NPC1-202ENST00000540608 LCN12Q6JVE5 192 aa9.89□□□□□ -0.83
NPC1-202ENST00000540608 OR8B3Q8NGG8 313 aa9.89□□□□□ -0.83
NPC1-202ENST00000540608 ST6GALNAC6Q969X2 333 aa9.89□□□□□ -0.83
NPC1-202ENST00000540608 PERPQ96FX8 193 aa9.89□□□□□ -0.83
NPC1-202ENST00000540608 OR8B2Q96RD0 313 aa9.89□□□□□ -0.83
NPC1-202ENST00000540608 BSNQ9UPA5 3926 aa9.88□□□□□ -0.83
NPC1-202ENST00000540608 KALRNO60229 2985 aa9.88□□□□□ -0.83
NPC1-202ENST00000540608 SLC25A5P05141 298 aaKnown RBP9.88□□□□□ -0.83
NPC1-202ENST00000540608 CAMPP49913 170 aa9.88□□□□□ -0.83
NPC1-202ENST00000540608 ETFRF1Q6IPR1 90 aa9.88□□□□□ -0.83
NPC1-202ENST00000540608 EBLN2Q6P2I7 272 aa9.88□□□□□ -0.83
NPC1-202ENST00000540608 GPR82Q96P67 336 aa9.88□□□□□ -0.83
NPC1-202ENST00000540608 C20orf202A1L168 122 aa9.88□□□□□ -0.83
NPC1-202ENST00000540608 PGPA6NDG6 321 aa9.88□□□□□ -0.83
NPC1-202ENST00000540608 C17orf100A8MU93 164 aa9.88□□□□□ -0.83
NPC1-202ENST00000540608 PLAUP00749 431 aa9.88□□□□□ -0.83
NPC1-202ENST00000540608 ATOH7Q8N100 152 aa9.88□□□□□ -0.83
NPC1-202ENST00000540608 C11orf42Q8N5U0 333 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms